RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 ZC2HC1BQ5TFG8 222 aa11.71□□□□□ -0.53
LRFN1-201ENST00000248668 APOMO95445 188 aa11.71□□□□□ -0.53
LRFN1-201ENST00000248668 Q8N1Y9 231 aa11.71□□□□□ -0.53
LRFN1-201ENST00000248668 TRBV20-1A0A075B6N2 111 aa11.71□□□□□ -0.54
LRFN1-201ENST00000248668 OR9G4Q8NGQ1 327 aa11.71□□□□□ -0.54
LRFN1-201ENST00000248668 DEFB131AP59861 70 aa11.7□□□□□ -0.54
LRFN1-201ENST00000248668 ZNF418Q8TF45 676 aaPredicted RBP11.7□□□□□ -0.54
LRFN1-201ENST00000248668 TMEM89A2RUT3 159 aa11.7□□□□□ -0.54
LRFN1-201ENST00000248668 SCGB3A1Q96QR1 104 aa11.7□□□□□ -0.54
LRFN1-201ENST00000248668 HHLA3Q9XRX5 114 aa11.7□□□□□ -0.54
LRFN1-201ENST00000248668 ATP5LO75964 103 aa11.69□□□□□ -0.54
LRFN1-201ENST00000248668 SPATA25Q9BR10 227 aa11.69□□□□□ -0.54
LRFN1-201ENST00000248668 DPM2O94777 84 aa11.69□□□□□ -0.54
LRFN1-201ENST00000248668 GAGE13Q4V321 117 aa11.69□□□□□ -0.54
LRFN1-201ENST00000248668 KLHL30-AS1Q8NEE0 82 aa11.69□□□□□ -0.54
LRFN1-201ENST00000248668 SUMO4Q6EEV6 95 aa11.68□□□□□ -0.54
LRFN1-201ENST00000248668 LINC00315P59091 139 aa11.68□□□□□ -0.54
LRFN1-201ENST00000248668 ZNF56Q15929 161 aa11.67□□□□□ -0.54
LRFN1-201ENST00000248668 C2orf66Q6UXQ4 117 aa11.67□□□□□ -0.54
LRFN1-201ENST00000248668 TMEM61Q8N0U2 210 aa11.67□□□□□ -0.54
LRFN1-201ENST00000248668 DLX4Q92988 240 aaPredicted RBP11.67□□□□□ -0.54
LRFN1-201ENST00000248668 CYSLTR1Q9Y271 337 aa11.67□□□□□ -0.54
LRFN1-201ENST00000248668 IGHV3-16A0A0C4DH30 117 aa11.67□□□□□ -0.54
LRFN1-201ENST00000248668 KIF25-AS1Q9Y6Z4 181 aa11.67□□□□□ -0.54
LRFN1-201ENST00000248668 IGHV3-73A0A0B4J1V6 119 aa11.67□□□□□ -0.54
LRFN1-201ENST00000248668 PRSS29PA6NIE9 313 aa11.67□□□□□ -0.54
LRFN1-201ENST00000248668 LGALS9O00182 355 aa11.67□□□□□ -0.54
LRFN1-201ENST00000248668 EMP1P54849 157 aa11.67□□□□□ -0.54
LRFN1-201ENST00000248668 PTH2Q96A98 100 aa11.67□□□□□ -0.54
LRFN1-201ENST00000248668 CHAC1Q9BUX1 264 aa11.67□□□□□ -0.54
LRFN1-201ENST00000248668 ZNF256Q9Y2P7 627 aaPredicted RBP11.67□□□□□ -0.54
LRFN1-201ENST00000248668 NACAE9PAV3 2078 aa11.66□□□□□ -0.54
LRFN1-201ENST00000248668 IGHV1OR15-1A0A075B7D0 117 aa11.66□□□□□ -0.54
LRFN1-201ENST00000248668 LINC01619G3V211 115 aa11.66□□□□□ -0.54
LRFN1-201ENST00000248668 MED14OSP0DP75 135 aa11.66□□□□□ -0.54
LRFN1-201ENST00000248668 GAGE5Q13069 117 aa11.66□□□□□ -0.54
LRFN1-201ENST00000248668 GAGE6Q13070 117 aa11.66□□□□□ -0.54
LRFN1-201ENST00000248668 FOXI2Q6ZQN5 318 aa11.66□□□□□ -0.54
LRFN1-201ENST00000248668 LRRC75A-AS1Q8N1F1 130 aa11.66□□□□□ -0.54
LRFN1-201ENST00000248668 UNC79Q9P2D8 2635 aa11.66□□□□□ -0.54
LRFN1-201ENST00000248668 RBMY1A1P0DJD3 496 aaKnown RBP11.66□□□□□ -0.54
LRFN1-201ENST00000248668 RBMY1CP0DJD4 496 aa11.66□□□□□ -0.54
LRFN1-201ENST00000248668 RBMY1FQ15415 496 aaKnown RBP11.66□□□□□ -0.54
LRFN1-201ENST00000248668 ORMDL2Q53FV1 153 aa11.66□□□□□ -0.54
LRFN1-201ENST00000248668 C1QTNF4Q9BXJ3 329 aa11.65□□□□□ -0.54
LRFN1-201ENST00000248668 ZMAT4Q9H898 229 aa11.65□□□□□ -0.54
LRFN1-201ENST00000248668 DUSP14O95147 198 aaKnown RBP11.65□□□□□ -0.54
LRFN1-201ENST00000248668 RPL39P62891 51 aaKnown RBP11.65□□□□□ -0.54
LRFN1-201ENST00000248668 DYNLRB2Q8TF09 96 aa11.65□□□□□ -0.54
LRFN1-201ENST00000248668 PHLDA1Q8WV24 401 aaPredicted RBP11.65□□□□□ -0.54
LRFN1-201ENST00000248668 A0A087WX48 190 aa11.64□□□□□ -0.55
LRFN1-201ENST00000248668 XGP55808 180 aa11.64□□□□□ -0.55
LRFN1-201ENST00000248668 Q6ZSV7 163 aa11.64□□□□□ -0.55
LRFN1-201ENST00000248668 IGLL5B9A064 214 aa11.64□□□□□ -0.55
LRFN1-201ENST00000248668 ZNF876PQ49A33 203 aa11.64□□□□□ -0.55
LRFN1-201ENST00000248668 LOC107984156A0A0G2JMH3 177 aa11.64□□□□□ -0.55
LRFN1-201ENST00000248668 DNAJC9-AS1A6NH13 148 aa11.64□□□□□ -0.55
LRFN1-201ENST00000248668 ARL17AQ8IVW1 177 aa11.64□□□□□ -0.55
LRFN1-201ENST00000248668 TOMM6Q96B49 74 aa11.64□□□□□ -0.55
LRFN1-201ENST00000248668 PDZD2O15018 2839 aa11.63□□□□□ -0.55
LRFN1-201ENST00000248668 F8W1H4 67 aa11.63□□□□□ -0.55
LRFN1-201ENST00000248668 NXPH4O95158 308 aa11.63□□□□□ -0.55
LRFN1-201ENST00000248668 SDHAF1A6NFY7 115 aa11.63□□□□□ -0.55
LRFN1-201ENST00000248668 RNF152Q8N8N0 203 aa11.63□□□□□ -0.55
LRFN1-201ENST00000248668 RPL32P62910 135 aaKnown RBP11.62□□□□□ -0.55
LRFN1-201ENST00000248668 MAPKAPK5-AS1Q8N8E1 139 aa11.62□□□□□ -0.55
LRFN1-201ENST00000248668 ESM1Q9NQ30 184 aa11.62□□□□□ -0.55
LRFN1-201ENST00000248668 TP53TG1Q9Y2A0 90 aa11.62□□□□□ -0.55
LRFN1-201ENST00000248668 TRBV25-1A0A075B6N4 114 aa11.62□□□□□ -0.55
LRFN1-201ENST00000248668 C9orf85Q96MD7 179 aa11.62□□□□□ -0.55
LRFN1-201ENST00000248668 RBMY1BA6NDE4 496 aaKnown RBP11.62□□□□□ -0.55
LRFN1-201ENST00000248668 RBMY1EA6NEQ0 496 aaKnown RBP11.62□□□□□ -0.55
LRFN1-201ENST00000248668 TSPAN13O95857 204 aa11.62□□□□□ -0.55
LRFN1-201ENST00000248668 RBMY1DP0C7P1 496 aaKnown RBP11.62□□□□□ -0.55
LRFN1-201ENST00000248668 BAALCQ8WXS3 180 aa11.62□□□□□ -0.55
LRFN1-201ENST00000248668 E9PLD3 99 aa11.61□□□□□ -0.55
LRFN1-201ENST00000248668 TEX29Q8N6K0 151 aa11.61□□□□□ -0.55
LRFN1-201ENST00000248668 ERG28Q9UKR5 140 aa11.61□□□□□ -0.55
LRFN1-201ENST00000248668 Q8N2B8 174 aa11.61□□□□□ -0.55
LRFN1-201ENST00000248668 KIR2DL4Q99706 377 aa11.61□□□□□ -0.55
LRFN1-201ENST00000248668 F8VRH5 84 aa11.6□□□□□ -0.55
LRFN1-201ENST00000248668 H7C1H1 209 aa11.6□□□□□ -0.55
LRFN1-201ENST00000248668 CRYGDP07320 174 aa11.6□□□□□ -0.55
LRFN1-201ENST00000248668 PROK1P58294 105 aa11.6□□□□□ -0.55
LRFN1-201ENST00000248668 FHL3Q13643 280 aa11.6□□□□□ -0.55
LRFN1-201ENST00000248668 C4orf3Q8WVX3 66 aa11.6□□□□□ -0.55
LRFN1-201ENST00000248668 P0DMU3 169 aa11.6□□□□□ -0.55
LRFN1-201ENST00000248668 FAM231AP0DMU4 169 aa11.6□□□□□ -0.55
LRFN1-201ENST00000248668 FAM231CP0DMU5 169 aa11.6□□□□□ -0.55
LRFN1-201ENST00000248668 Q6ZUT4 128 aa11.6□□□□□ -0.55
LRFN1-201ENST00000248668 ODF3Q96PU9 254 aa11.6□□□□□ -0.55
LRFN1-201ENST00000248668 PEMTQ9UBM1 199 aa11.6□□□□□ -0.55
LRFN1-201ENST00000248668 OR11H12B2RN74 326 aa11.59□□□□□ -0.55
LRFN1-201ENST00000248668 ZFP2Q6ZN57 461 aa11.59□□□□□ -0.55
LRFN1-201ENST00000248668 CEND1Q8N111 149 aa11.59□□□□□ -0.55
LRFN1-201ENST00000248668 OR11H2Q8NH07 326 aa11.59□□□□□ -0.55
LRFN1-201ENST00000248668 CDIP1Q9H305 208 aa11.59□□□□□ -0.55
LRFN1-201ENST00000248668 YAE1D1Q9NRH1 226 aa11.59□□□□□ -0.55
LRFN1-201ENST00000248668 H3BMM0 161 aa11.59□□□□□ -0.55
LRFN1-201ENST00000248668 NEXN-AS1Q8NBZ9 246 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms