RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 A0A096LNJ9 63 aa7.08□□□□□ -1.28
COL21A1-201ENST00000244728 TRAV12-1A0A0B4J245 112 aa7.08□□□□□ -1.28
COL21A1-201ENST00000244728 COPS9Q8WXC6 57 aa7.08□□□□□ -1.28
COL21A1-201ENST00000244728 H3BMM0 161 aa7.08□□□□□ -1.28
COL21A1-201ENST00000244728 UBE2WQ96B02 151 aa7.08□□□□□ -1.28
COL21A1-201ENST00000244728 SS18L2Q9UHA2 77 aa7.08□□□□□ -1.28
COL21A1-201ENST00000244728 AGRNO00468 2067 aa7.08□□□□□ -1.28
COL21A1-201ENST00000244728 CRYBA4P53673 196 aa7.08□□□□□ -1.28
COL21A1-201ENST00000244728 MAST4O15021 2626 aa7.08□□□□□ -1.28
COL21A1-201ENST00000244728 CFC1BP0CG36 223 aa7.08□□□□□ -1.28
COL21A1-201ENST00000244728 CFC1P0CG37 223 aa7.08□□□□□ -1.28
COL21A1-201ENST00000244728 RPL39P62891 51 aaKnown RBP7.08□□□□□ -1.28
COL21A1-201ENST00000244728 C11orf86A6NJI1 115 aa7.07□□□□□ -1.28
COL21A1-201ENST00000244728 ADAMTS20P59510 1910 aa7.07□□□□□ -1.28
COL21A1-201ENST00000244728 IGHV4OR15-8A0A075B7B6 117 aa7.07□□□□□ -1.28
COL21A1-201ENST00000244728 A0A087WW49 117 aa7.07□□□□□ -1.28
COL21A1-201ENST00000244728 A4D1N5 150 aa7.07□□□□□ -1.28
COL21A1-201ENST00000244728 TRPT1Q86TN4 253 aaKnown RBP7.07□□□□□ -1.28
COL21A1-201ENST00000244728 TOMM6Q96B49 74 aa7.07□□□□□ -1.28
COL21A1-201ENST00000244728 MRPL53Q96EL3 112 aaKnown RBP7.07□□□□□ -1.28
COL21A1-201ENST00000244728 CCL24O00175 119 aa7.07□□□□□ -1.28
COL21A1-201ENST00000244728 SPEGQ15772 3267 aa7.07□□□□□ -1.28
COL21A1-201ENST00000244728 ZFP2Q6ZN57 461 aa7.07□□□□□ -1.28
COL21A1-201ENST00000244728 PRIMA1Q86XR5 153 aa7.07□□□□□ -1.28
COL21A1-201ENST00000244728 ANKRD29Q8N6D5 301 aa7.07□□□□□ -1.28
COL21A1-201ENST00000244728 C6orf226Q5I0X4 101 aa7.06□□□□□ -1.28
COL21A1-201ENST00000244728 LY6G5BQ8NDX9 201 aa7.06□□□□□ -1.28
COL21A1-201ENST00000244728 LENEPQ9Y5L5 61 aa7.06□□□□□ -1.28
COL21A1-201ENST00000244728 SPTBN5Q9NRC6 3674 aaKnown RBP7.06□□□□□ -1.28
COL21A1-201ENST00000244728 PAX4O43316 350 aa7.06□□□□□ -1.28
COL21A1-201ENST00000244728 INSL3P51460 131 aa7.06□□□□□ -1.28
COL21A1-201ENST00000244728 F5H768 121 aa7.06□□□□□ -1.28
COL21A1-201ENST00000244728 MT-ATP8P03928 68 aa7.06□□□□□ -1.28
COL21A1-201ENST00000244728 CELSR3Q9NYQ7 3312 aa7.06□□□□□ -1.28
COL21A1-201ENST00000244728 F8P00451 2351 aa7.06□□□□□ -1.28
COL21A1-201ENST00000244728 IFITM1P13164 125 aa7.05□□□□□ -1.28
COL21A1-201ENST00000244728 C10orf99Q6UWK7 81 aa7.05□□□□□ -1.28
COL21A1-201ENST00000244728 PTPRBP23467 1997 aa7.05□□□□□ -1.28
COL21A1-201ENST00000244728 MGAM2Q2M2H8 2515 aa7.05□□□□□ -1.28
COL21A1-201ENST00000244728 SRSF2Q01130 221 aaKnown RBP7.05□□□□□ -1.28
COL21A1-201ENST00000244728 GAGE6Q13070 117 aa7.05□□□□□ -1.28
COL21A1-201ENST00000244728 C9orf47Q6ZRZ4 202 aa7.05□□□□□ -1.28
COL21A1-201ENST00000244728 C15orf53Q8NAA6 179 aa7.05□□□□□ -1.28
COL21A1-201ENST00000244728 GATD1Q8NB37 220 aa7.05□□□□□ -1.28
COL21A1-201ENST00000244728 NDUFA12Q9UI09 145 aa7.05□□□□□ -1.28
COL21A1-201ENST00000244728 HHLA3Q9XRX5 114 aa7.05□□□□□ -1.28
COL21A1-201ENST00000244728 SMAD5-AS1Q9Y6J3 95 aa7.05□□□□□ -1.28
COL21A1-201ENST00000244728 ESM1Q9NQ30 184 aa7.05□□□□□ -1.28
COL21A1-201ENST00000244728 REV3LO60673 3130 aa7.05□□□□□ -1.28
COL21A1-201ENST00000244728 JPT2Q9H910 190 aa7.05□□□□□ -1.28
COL21A1-201ENST00000244728 NOP10Q9NPE3 64 aaKnown RBP7.05□□□□□ -1.28
COL21A1-201ENST00000244728 I3L3M4 83 aa7.04□□□□□ -1.28
COL21A1-201ENST00000244728 IGHG2P01859 326 aa7.04□□□□□ -1.28
COL21A1-201ENST00000244728 CMC4P56277 68 aaPredicted RBP7.04□□□□□ -1.28
COL21A1-201ENST00000244728 SUMO4Q6EEV6 95 aa7.04□□□□□ -1.28
COL21A1-201ENST00000244728 C16orf54Q6UWD8 224 aa7.04□□□□□ -1.28
COL21A1-201ENST00000244728 CCDC140Q96MF4 163 aa7.04□□□□□ -1.28
COL21A1-201ENST00000244728 TCL1BO95988 128 aa7.04□□□□□ -1.28
COL21A1-201ENST00000244728 CRPP02741 224 aa7.04□□□□□ -1.28
COL21A1-201ENST00000244728 CLPSL2Q6UWE3 100 aa7.04□□□□□ -1.28
COL21A1-201ENST00000244728 Q6ZUT4 128 aa7.04□□□□□ -1.28
COL21A1-201ENST00000244728 PRORYQ9H606 182 aa7.04□□□□□ -1.28
COL21A1-201ENST00000244728 U3KQE9 123 aa7.04□□□□□ -1.28
COL21A1-201ENST00000244728 A0A0J9YXV3 536 aa7.04□□□□□ -1.28
COL21A1-201ENST00000244728 NDUFA11Q86Y39 141 aa7.04□□□□□ -1.28
COL21A1-201ENST00000244728 MUSTN1Q8IVN3 82 aa7.04□□□□□ -1.28
COL21A1-201ENST00000244728 IGF1P05019 195 aa7.03□□□□□ -1.28
COL21A1-201ENST00000244728 PFN2P35080 140 aa7.03□□□□□ -1.28
COL21A1-201ENST00000244728 WFDC11Q8NEX6 87 aa7.03□□□□□ -1.28
COL21A1-201ENST00000244728 ATP6V0E2Q8NHE4 81 aa7.03□□□□□ -1.28
COL21A1-201ENST00000244728 RASL10AQ92737 203 aa7.03□□□□□ -1.28
COL21A1-201ENST00000244728 DMDP11532 3685 aa7.03□□□□□ -1.28
COL21A1-201ENST00000244728 TMEM61Q8N0U2 210 aa7.03□□□□□ -1.28
COL21A1-201ENST00000244728 MORN3Q6PF18 240 aaPredicted RBP7.03□□□□□ -1.28
COL21A1-201ENST00000244728 RNF183Q96D59 192 aa7.03□□□□□ -1.28
COL21A1-201ENST00000244728 CARD19Q96LW7 228 aa7.03□□□□□ -1.28
COL21A1-201ENST00000244728 C11orf21Q9P2W6 132 aa7.03□□□□□ -1.28
COL21A1-201ENST00000244728 RHODO00212 210 aa7.03□□□□□ -1.28
COL21A1-201ENST00000244728 NEXN-AS1Q8NBZ9 246 aa7.03□□□□□ -1.28
COL21A1-201ENST00000244728 LAMA1P25391 3075 aa7.02□□□□□ -1.29
COL21A1-201ENST00000244728 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.02□□□□□ -1.29
COL21A1-201ENST00000244728 A0A0J9YY99 117 aa7.02□□□□□ -1.29
COL21A1-201ENST00000244728 IGKV2-29A2NJV5 120 aaPredicted RBP7.02□□□□□ -1.29
COL21A1-201ENST00000244728 ODF3BA8MYP8 253 aa7.02□□□□□ -1.29
COL21A1-201ENST00000244728 H3BUA1 57 aa7.02□□□□□ -1.29
COL21A1-201ENST00000244728 Q8N1Y9 231 aa7.02□□□□□ -1.29
COL21A1-201ENST00000244728 DSPP15924 2871 aaKnown RBP7.02□□□□□ -1.29
COL21A1-201ENST00000244728 MRPS12O15235 138 aaKnown RBP7.02□□□□□ -1.29
COL21A1-201ENST00000244728 LINC01620Q4KN68 170 aa7.02□□□□□ -1.29
COL21A1-201ENST00000244728 NRACQ8N912 160 aa7.02□□□□□ -1.29
COL21A1-201ENST00000244728 CLUHP3Q96NS8 147 aa7.02□□□□□ -1.29
COL21A1-201ENST00000244728 OPRPNQ99935 248 aaPredicted RBP7.02□□□□□ -1.29
COL21A1-201ENST00000244728 A0A1W2PPR1 153 aa7.01□□□□□ -1.29
COL21A1-201ENST00000244728 LY6LH3BQJ8 138 aa7.01□□□□□ -1.29
COL21A1-201ENST00000244728 DAD1P61803 113 aa7.01□□□□□ -1.29
COL21A1-201ENST00000244728 LEPROTO15243 131 aa7.01□□□□□ -1.29
COL21A1-201ENST00000244728 NXPH4O95158 308 aa7.01□□□□□ -1.29
COL21A1-201ENST00000244728 PIFOQ8TCI5 191 aa7.01□□□□□ -1.29
COL21A1-201ENST00000244728 MDFICQ9P1T7 246 aa7.01□□□□□ -1.29
COL21A1-201ENST00000244728 SPATA25Q9BR10 227 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms