RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 TRPT1Q86TN4 253 aaKnown RBP12.49□□□□□ -0.41
HOXC6-201ENST00000243108 CSTL1Q9H114 145 aa12.49□□□□□ -0.41
HOXC6-201ENST00000243108 CBY3A6NI87 242 aa12.48□□□□□ -0.41
HOXC6-201ENST00000243108 MGPP08493 103 aa12.48□□□□□ -0.41
HOXC6-201ENST00000243108 DDTP30046 118 aa12.48□□□□□ -0.41
HOXC6-201ENST00000243108 STHQ8IWL8 128 aa12.48□□□□□ -0.41
HOXC6-201ENST00000243108 C20orf78Q9BR46 151 aa12.48□□□□□ -0.41
HOXC6-201ENST00000243108 INSP01308 110 aa12.48□□□□□ -0.41
HOXC6-201ENST00000243108 SMIM17P0DL12 118 aa12.48□□□□□ -0.41
HOXC6-201ENST00000243108 JPT2Q9H910 190 aa12.48□□□□□ -0.41
HOXC6-201ENST00000243108 PPP1R17O96001 155 aa12.47□□□□□ -0.41
HOXC6-201ENST00000243108 FCER1GP30273 86 aa12.47□□□□□ -0.41
HOXC6-201ENST00000243108 SMIM2Q9BVW6 85 aa12.47□□□□□ -0.41
HOXC6-201ENST00000243108 PAM16Q9Y3D7 125 aa12.47□□□□□ -0.41
HOXC6-201ENST00000243108 C20orf202A1L168 122 aa12.46□□□□□ -0.41
HOXC6-201ENST00000243108 GIG44P09565 113 aaPredicted RBP12.46□□□□□ -0.41
HOXC6-201ENST00000243108 SUMO2P61956 95 aaKnown RBP12.46□□□□□ -0.41
HOXC6-201ENST00000243108 LINC01545Q5VT33 79 aa12.45□□□□□ -0.42
HOXC6-201ENST00000243108 PTH2Q96A98 100 aa12.45□□□□□ -0.42
HOXC6-201ENST00000243108 RPL39LQ96EH5 51 aaKnown RBP12.45□□□□□ -0.42
HOXC6-201ENST00000243108 CRYGDP07320 174 aa12.44□□□□□ -0.42
HOXC6-201ENST00000243108 RPL32P62910 135 aaKnown RBP12.44□□□□□ -0.42
HOXC6-201ENST00000243108 PIK3CD-AS1Q5SR53 167 aa12.44□□□□□ -0.42
HOXC6-201ENST00000243108 SUMO4Q6EEV6 95 aa12.44□□□□□ -0.42
HOXC6-201ENST00000243108 A0A087WWL8 130 aa12.43□□□□□ -0.42
HOXC6-201ENST00000243108 K7EMI3 77 aa12.43□□□□□ -0.42
HOXC6-201ENST00000243108 ZNF415Q09FC8 603 aa12.43□□□□□ -0.42
HOXC6-201ENST00000243108 LAGE3Q14657 143 aa12.43□□□□□ -0.42
HOXC6-201ENST00000243108 ZNF876PQ49A33 203 aa12.43□□□□□ -0.42
HOXC6-201ENST00000243108 ATOH7Q8N100 152 aa12.43□□□□□ -0.42
HOXC6-201ENST00000243108 LINC01587Q99440 93 aa12.43□□□□□ -0.42
HOXC6-201ENST00000243108 KMT2AQ03164 3969 aa12.43□□□□□ -0.42
HOXC6-201ENST00000243108 TRAV9-2A0A087WT02 112 aa12.42□□□□□ -0.42
HOXC6-201ENST00000243108 NUTF2P61970 127 aaKnown RBP12.42□□□□□ -0.42
HOXC6-201ENST00000243108 SPATA45Q537H7 98 aa12.42□□□□□ -0.42
HOXC6-201ENST00000243108 OR11H2Q8NH07 326 aa12.42□□□□□ -0.42
HOXC6-201ENST00000243108 C11orf72Q8NBR9 251 aa12.42□□□□□ -0.42
HOXC6-201ENST00000243108 IFI27L1Q96BM0 104 aa12.42□□□□□ -0.42
HOXC6-201ENST00000243108 NDUFAF3Q9BU61 184 aa12.42□□□□□ -0.42
HOXC6-201ENST00000243108 XCL2Q9UBD3 114 aa12.42□□□□□ -0.42
HOXC6-201ENST00000243108 M0R2P5 195 aa12.41□□□□□ -0.42
HOXC6-201ENST00000243108 HTN1P15515 57 aa12.41□□□□□ -0.42
HOXC6-201ENST00000243108 C1orf158Q8N1D5 194 aa12.41□□□□□ -0.42
HOXC6-201ENST00000243108 TRBV6-5A0A0K0K1A5 114 aa12.4□□□□□ -0.42
HOXC6-201ENST00000243108 DEFB4AO15263 64 aa12.4□□□□□ -0.42
HOXC6-201ENST00000243108 TCAPO15273 167 aa12.4□□□□□ -0.42
HOXC6-201ENST00000243108 PRM2P04554 102 aa12.4□□□□□ -0.42
HOXC6-201ENST00000243108 ZNF705AQ6ZN79 300 aaPredicted RBP12.4□□□□□ -0.42
HOXC6-201ENST00000243108 SPXQ9BT56 116 aa12.4□□□□□ -0.42
HOXC6-201ENST00000243108 LGALS9BQ3B8N2 356 aa12.4□□□□□ -0.43
HOXC6-201ENST00000243108 MAJINQ3KP22 176 aa12.4□□□□□ -0.43
HOXC6-201ENST00000243108 ORMDL2Q53FV1 153 aa12.4□□□□□ -0.43
HOXC6-201ENST00000243108 FAM74A4Q5TZK3 123 aa12.4□□□□□ -0.43
HOXC6-201ENST00000243108 LGALS9CQ6DKI2 356 aa12.4□□□□□ -0.43
HOXC6-201ENST00000243108 MIEN1Q9BRT3 115 aa12.4□□□□□ -0.43
HOXC6-201ENST00000243108 F5H697 171 aa12.39□□□□□ -0.43
HOXC6-201ENST00000243108 M0QY20 66 aa12.39□□□□□ -0.43
HOXC6-201ENST00000243108 POLR2KP53803 58 aaKnown RBP12.39□□□□□ -0.43
HOXC6-201ENST00000243108 CEMP1Q6PRD7 247 aaPredicted RBP12.39□□□□□ -0.43
HOXC6-201ENST00000243108 C14orf144Q96I85 54 aa12.39□□□□□ -0.43
HOXC6-201ENST00000243108 ST20Q9HBF5 79 aa12.39□□□□□ -0.43
HOXC6-201ENST00000243108 H0Y8G0 127 aa12.38□□□□□ -0.43
HOXC6-201ENST00000243108 NUPR2A6NF83 97 aa12.37□□□□□ -0.43
HOXC6-201ENST00000243108 A8MWV9 139 aa12.37□□□□□ -0.43
HOXC6-201ENST00000243108 IGLC3P0DOY3 106 aa12.37□□□□□ -0.43
HOXC6-201ENST00000243108 NANOS2P60321 138 aaKnown RBP12.37□□□□□ -0.43
HOXC6-201ENST00000243108 ZNF56Q15929 161 aa12.37□□□□□ -0.43
HOXC6-201ENST00000243108 UFSP1Q6NVU6 142 aa12.37□□□□□ -0.43
HOXC6-201ENST00000243108 CSNK1G2-AS1Q8NCQ2 148 aa12.37□□□□□ -0.43
HOXC6-201ENST00000243108 LINC00476Q8WZB0 136 aa12.37□□□□□ -0.43
HOXC6-201ENST00000243108 C11orf68Q9H3H3 251 aaKnown RBP12.37□□□□□ -0.43
HOXC6-201ENST00000243108 VPS13DQ5THJ4 4388 aa12.37□□□□□ -0.43
HOXC6-201ENST00000243108 ATP5LO75964 103 aa12.37□□□□□ -0.43
HOXC6-201ENST00000243108 MORN3Q6PF18 240 aaPredicted RBP12.37□□□□□ -0.43
HOXC6-201ENST00000243108 Q8NAQ8 132 aa12.37□□□□□ -0.43
HOXC6-201ENST00000243108 C18orf15Q96N68 181 aa12.37□□□□□ -0.43
HOXC6-201ENST00000243108 TMEM208Q9BTX3 173 aa12.37□□□□□ -0.43
HOXC6-201ENST00000243108 FRAS1Q86XX4 4008 aa12.36□□□□□ -0.43
HOXC6-201ENST00000243108 NUDT3O95989 172 aa12.36□□□□□ -0.43
HOXC6-201ENST00000243108 PHLDA1Q8WV24 401 aaPredicted RBP12.36□□□□□ -0.43
HOXC6-201ENST00000243108 AZU1P20160 251 aa12.35□□□□□ -0.43
HOXC6-201ENST00000243108 PMCHL2Q9BQD1 86 aa12.35□□□□□ -0.43
HOXC6-201ENST00000243108 X6R8D5 127 aa12.35□□□□□ -0.43
HOXC6-201ENST00000243108 TRBV27A0A0K0K1C4 114 aa12.34□□□□□ -0.43
HOXC6-201ENST00000243108 VCYO14598 125 aa12.34□□□□□ -0.43
HOXC6-201ENST00000243108 C11orf45Q8TAV5 145 aa12.34□□□□□ -0.43
HOXC6-201ENST00000243108 RNASE8Q8TDE3 154 aaKnown RBP12.34□□□□□ -0.43
HOXC6-201ENST00000243108 TOMM6Q96B49 74 aa12.34□□□□□ -0.43
HOXC6-201ENST00000243108 C1QTNF4Q9BXJ3 329 aa12.34□□□□□ -0.43
HOXC6-201ENST00000243108 GOLT1BQ9Y3E0 138 aa12.34□□□□□ -0.43
HOXC6-201ENST00000243108 hDV102S1A0JD36 115 aa12.34□□□□□ -0.43
HOXC6-201ENST00000243108 SDHAF1A6NFY7 115 aa12.34□□□□□ -0.43
HOXC6-201ENST00000243108 UQCR10Q9UDW1 63 aa12.34□□□□□ -0.43
HOXC6-201ENST00000243108 BIRC6Q9NR09 4857 aa12.34□□□□□ -0.43
HOXC6-201ENST00000243108 IGHV4-28A0A0C4DH34 117 aa12.33□□□□□ -0.44
HOXC6-201ENST00000243108 CFAP126Q5VTH2 177 aa12.33□□□□□ -0.44
HOXC6-201ENST00000243108 NACAE9PAV3 2078 aa12.32□□□□□ -0.44
HOXC6-201ENST00000243108 IGHV3OR16-12A0A075B7B8 117 aa12.32□□□□□ -0.44
HOXC6-201ENST00000243108 HSBP1L1C9JCN9 74 aa12.32□□□□□ -0.44
HOXC6-201ENST00000243108 H7C1H1 209 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms