RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 C10orf126Q8N4M7 172 aa9.82□□□□□ -0.84
SRP54-201ENST00000216774 LINC01356Q8N9X3 169 aa9.82□□□□□ -0.84
SRP54-201ENST00000216774 J3QLI3 93 aa9.81□□□□□ -0.84
SRP54-201ENST00000216774 FOXI1Q12951 378 aa9.81□□□□□ -0.84
SRP54-201ENST00000216774 ELANEP08246 267 aa9.81□□□□□ -0.84
SRP54-201ENST00000216774 INSL3P51460 131 aa9.81□□□□□ -0.84
SRP54-201ENST00000216774 PRO1854Q9UHT4 67 aa9.81□□□□□ -0.84
SRP54-201ENST00000216774 COL12A1Q99715 3063 aa9.81□□□□□ -0.84
SRP54-201ENST00000216774 RHODO00212 210 aa9.8□□□□□ -0.84
SRP54-201ENST00000216774 OPRPNQ99935 248 aaPredicted RBP9.8□□□□□ -0.84
SRP54-201ENST00000216774 IGLV4-3A0A075B6K6 122 aa9.8□□□□□ -0.84
SRP54-201ENST00000216774 ZNF22P17026 224 aaPredicted RBP9.8□□□□□ -0.84
SRP54-201ENST00000216774 HOXD3P31249 432 aaPredicted RBP9.8□□□□□ -0.84
SRP54-201ENST00000216774 SMAGPQ0VAQ4 97 aa9.8□□□□□ -0.84
SRP54-201ENST00000216774 UBE2E2Q96LR5 201 aa9.8□□□□□ -0.84
SRP54-201ENST00000216774 VCX2Q9H322 139 aa9.8□□□□□ -0.84
SRP54-201ENST00000216774 PYGO1Q9Y3Y4 419 aa9.8□□□□□ -0.84
SRP54-201ENST00000216774 CELSR2Q9HCU4 2923 aa9.8□□□□□ -0.84
SRP54-201ENST00000216774 SFTA2Q6UW10 78 aa9.79□□□□□ -0.84
SRP54-201ENST00000216774 VPREB3Q9UKI3 123 aa9.79□□□□□ -0.84
SRP54-201ENST00000216774 CRYBA4P53673 196 aa9.79□□□□□ -0.84
SRP54-201ENST00000216774 TCL1BO95988 128 aa9.78□□□□□ -0.84
SRP54-201ENST00000216774 SBSPONQ8IVN8 264 aa9.78□□□□□ -0.84
SRP54-201ENST00000216774 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.78□□□□□ -0.847e-8■■■■■ 26.8
SRP54-201ENST00000216774 A8MTW9 85 aa9.77□□□□□ -0.84
SRP54-201ENST00000216774 A0A0B4J2C4 111 aa9.77□□□□□ -0.85
SRP54-201ENST00000216774 A0A0J9YXV3 536 aa9.77□□□□□ -0.85
SRP54-201ENST00000216774 PIK3CD-AS1Q5SR53 167 aa9.77□□□□□ -0.85
SRP54-201ENST00000216774 TEN1Q86WV5 123 aa9.77□□□□□ -0.85
SRP54-201ENST00000216774 ZNF418Q8TF45 676 aaPredicted RBP9.77□□□□□ -0.85
SRP54-201ENST00000216774 A0A096LNT2 108 aa9.76□□□□□ -0.85
SRP54-201ENST00000216774 A4D1N5 150 aa9.76□□□□□ -0.85
SRP54-201ENST00000216774 RBMY1A1P0DJD3 496 aaKnown RBP9.76□□□□□ -0.85
SRP54-201ENST00000216774 RBMY1CP0DJD4 496 aa9.76□□□□□ -0.85
SRP54-201ENST00000216774 RBMY1FQ15415 496 aaKnown RBP9.76□□□□□ -0.85
SRP54-201ENST00000216774 TCTEX1D4Q5JR98 221 aa9.76□□□□□ -0.85
SRP54-201ENST00000216774 ZNF702PQ9H963 129 aa9.76□□□□□ -0.85
SRP54-201ENST00000216774 Q5PR19 223 aa9.76□□□□□ -0.85
SRP54-201ENST00000216774 PPDPFLQ8WWR9 84 aa9.76□□□□□ -0.85
SRP54-201ENST00000216774 DUX5Q96PT3 197 aa9.76□□□□□ -0.85
SRP54-201ENST00000216774 MAP1AP78559 2803 aaPredicted RBP9.76□□□□□ -0.85
SRP54-201ENST00000216774 A8MWV9 139 aa9.75□□□□□ -0.85
SRP54-201ENST00000216774 MRPS36P82909 103 aaKnown RBP9.75□□□□□ -0.85
SRP54-201ENST00000216774 TMEM263Q8WUH6 116 aaKnown RBP9.75□□□□□ -0.85
SRP54-201ENST00000216774 DOPEY1Q5JWR5 2465 aa9.75□□□□□ -0.85
SRP54-201ENST00000216774 CFAP46Q8IYW2 2715 aa9.75□□□□□ -0.85
SRP54-201ENST00000216774 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.75□□□□□ -0.85
SRP54-201ENST00000216774 TRAV2A0A0B4J234 112 aa9.75□□□□□ -0.85
SRP54-201ENST00000216774 M0R2P5 195 aa9.75□□□□□ -0.85
SRP54-201ENST00000216774 IGHV3-33P01772 117 aa9.75□□□□□ -0.85
SRP54-201ENST00000216774 SCGB1C2P0DMR2 95 aa9.75□□□□□ -0.85
SRP54-201ENST00000216774 CD28P10747 220 aa9.75□□□□□ -0.85
SRP54-201ENST00000216774 Q6YL49 198 aa9.75□□□□□ -0.85
SRP54-201ENST00000216774 PTH2Q96A98 100 aa9.75□□□□□ -0.85
SRP54-201ENST00000216774 CRYBG3Q68DQ2 2970 aa9.74□□□□□ -0.85
SRP54-201ENST00000216774 M0QXV9 152 aa9.74□□□□□ -0.85
SRP54-201ENST00000216774 TGFAP01135 160 aa9.74□□□□□ -0.85
SRP54-201ENST00000216774 TNFRSF18Q9Y5U5 241 aa9.74□□□□□ -0.85
SRP54-201ENST00000216774 A0A0J9YXY3 114 aa9.73□□□□□ -0.85
SRP54-201ENST00000216774 KNCNA6PVL3 124 aa9.73□□□□□ -0.85
SRP54-201ENST00000216774 H3BMM0 161 aa9.73□□□□□ -0.85
SRP54-201ENST00000216774 FSHBP01225 129 aa9.73□□□□□ -0.85
SRP54-201ENST00000216774 MUSTN1Q8IVN3 82 aa9.73□□□□□ -0.85
SRP54-201ENST00000216774 NRGNQ92686 78 aa9.73□□□□□ -0.85
SRP54-201ENST00000216774 FAM104AQ969W3 186 aa9.73□□□□□ -0.85
SRP54-201ENST00000216774 ERG28Q9UKR5 140 aa9.73□□□□□ -0.85
SRP54-201ENST00000216774 IGHV3-64A0A075B6Q5 118 aa9.73□□□□□ -0.85
SRP54-201ENST00000216774 IGHV3-30-3P0DP02 117 aa9.73□□□□□ -0.85
SRP54-201ENST00000216774 TIMM21Q9BVV7 248 aa9.73□□□□□ -0.85
SRP54-201ENST00000216774 CDIP1Q9H305 208 aa9.73□□□□□ -0.85
SRP54-201ENST00000216774 SPG11Q96JI7 2443 aa9.73□□□□□ -0.85
SRP54-201ENST00000216774 PKD1L2Q7Z442 2459 aa9.73□□□□□ -0.85
SRP54-201ENST00000216774 EIF4EBP3O60516 100 aaPredicted RBP9.72□□□□□ -0.85
SRP54-201ENST00000216774 DEFB131AP59861 70 aa9.72□□□□□ -0.85
SRP54-201ENST00000216774 SPANXA1Q9NS26 97 aa9.72□□□□□ -0.85
SRP54-201ENST00000216774 IGHV3-73A0A0B4J1V6 119 aa9.72□□□□□ -0.85
SRP54-201ENST00000216774 HTN1P15515 57 aa9.72□□□□□ -0.85
SRP54-201ENST00000216774 ZNF415Q09FC8 603 aa9.72□□□□□ -0.85
SRP54-201ENST00000216774 RAX2Q96IS3 184 aa9.72□□□□□ -0.85
SRP54-201ENST00000216774 CARD19Q96LW7 228 aa9.72□□□□□ -0.85
SRP54-201ENST00000216774 DUX3Q96PT4 197 aa9.72□□□□□ -0.85
SRP54-201ENST00000216774 SPXQ9BT56 116 aa9.71□□□□□ -0.85
SRP54-201ENST00000216774 CSPG4Q6UVK1 2322 aa9.71□□□□□ -0.85
SRP54-201ENST00000216774 DOPEY2Q9Y3R5 2298 aa9.71□□□□□ -0.85
SRP54-201ENST00000216774 FLNCQ14315 2725 aa9.71□□□□□ -0.86
SRP54-201ENST00000216774 IGHV1-58A0A0C4DH39 117 aa9.71□□□□□ -0.86
SRP54-201ENST00000216774 TINCRA0A1B0GVN0 87 aa9.71□□□□□ -0.86
SRP54-201ENST00000216774 RBMY1BA6NDE4 496 aaKnown RBP9.71□□□□□ -0.86
SRP54-201ENST00000216774 RBMY1EA6NEQ0 496 aaKnown RBP9.71□□□□□ -0.86
SRP54-201ENST00000216774 CIDEAO60543 219 aa9.71□□□□□ -0.86
SRP54-201ENST00000216774 RBMY1DP0C7P1 496 aaKnown RBP9.71□□□□□ -0.86
SRP54-201ENST00000216774 PROK1P58294 105 aa9.71□□□□□ -0.86
SRP54-201ENST00000216774 LINC00467Q9BRT7 94 aa9.71□□□□□ -0.86
SRP54-201ENST00000216774 SLURP1P55000 103 aa9.7□□□□□ -0.86
SRP54-201ENST00000216774 LITAFQ99732 161 aa9.7□□□□□ -0.86
SRP54-201ENST00000216774 A0A1B0GV72 72 aa9.7□□□□□ -0.86
SRP54-201ENST00000216774 ANKRD29Q8N6D5 301 aa9.7□□□□□ -0.86
SRP54-201ENST00000216774 CHCHD7Q9BUK0 85 aa9.7□□□□□ -0.86
SRP54-201ENST00000216774 PEMTQ9UBM1 199 aa9.7□□□□□ -0.86
SRP54-201ENST00000216774 SLC25A20O43772 301 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms