RNA–Protein interactions for RNA: ENST00000216492.9

CHGA-201, Transcript of chromogranin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHGA, Length 2,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-201ENST00000216492 A0A0J9YX75 114 aa12.52□□□□□ -0.4
CHGA-201ENST00000216492 H3BUT2 72 aa12.52□□□□□ -0.4
CHGA-201ENST00000216492 SMIM13P0DJ93 91 aa12.52□□□□□ -0.4
CHGA-201ENST00000216492 NEXN-AS1Q8NBZ9 246 aa12.52□□□□□ -0.4
CHGA-201ENST00000216492 KIF25-AS1Q9Y6Z4 181 aa12.52□□□□□ -0.4
CHGA-201ENST00000216492 SORL1Q92673 2214 aa12.52□□□□□ -0.41
CHGA-201ENST00000216492 TRAV25A0A0B4J276 109 aa12.52□□□□□ -0.41
CHGA-201ENST00000216492 SPAG8Q99932 426 aaPredicted RBP12.52□□□□□ -0.41
CHGA-201ENST00000216492 TTTY13Q9BZ97 58 aa12.52□□□□□ -0.41
CHGA-201ENST00000216492 SAP30O75446 220 aa12.51□□□□□ -0.41
CHGA-201ENST00000216492 DEFB131AP59861 70 aa12.51□□□□□ -0.41
CHGA-201ENST00000216492 SYT8Q8NBV8 401 aa12.5□□□□□ -0.41
CHGA-201ENST00000216492 DUSP14O95147 198 aaKnown RBP12.5□□□□□ -0.41
CHGA-201ENST00000216492 IGKV3-20P01619 116 aa12.5□□□□□ -0.41
CHGA-201ENST00000216492 PF4P02776 101 aa12.5□□□□□ -0.41
CHGA-201ENST00000216492 LINC00315P59091 139 aa12.5□□□□□ -0.41
CHGA-201ENST00000216492 TAL2Q16559 108 aa12.5□□□□□ -0.41
CHGA-201ENST00000216492 FOXI2Q6ZQN5 318 aa12.5□□□□□ -0.41
CHGA-201ENST00000216492 RAB37Q96AX2 223 aa12.5□□□□□ -0.41
CHGA-201ENST00000216492 CYSLTR1Q9Y271 337 aa12.5□□□□□ -0.41
CHGA-201ENST00000216492 ZNF256Q9Y2P7 627 aaPredicted RBP12.5□□□□□ -0.41
CHGA-201ENST00000216492 GAGE12BA1L429 117 aa12.49□□□□□ -0.41
CHGA-201ENST00000216492 BAALCQ8WXS3 180 aa12.49□□□□□ -0.41
CHGA-201ENST00000216492 OR11H12B2RN74 326 aa12.49□□□□□ -0.41
CHGA-201ENST00000216492 F5H697 171 aa12.49□□□□□ -0.41
CHGA-201ENST00000216492 K7EP34 96 aa12.49□□□□□ -0.41
CHGA-201ENST00000216492 SUMO4Q6EEV6 95 aa12.49□□□□□ -0.41
CHGA-201ENST00000216492 CEND1Q8N111 149 aa12.49□□□□□ -0.41
CHGA-201ENST00000216492 OR11H2Q8NH07 326 aa12.49□□□□□ -0.41
CHGA-201ENST00000216492 C9orf85Q96MD7 179 aa12.49□□□□□ -0.41
CHGA-201ENST00000216492 KIR2DL4Q99706 377 aa12.49□□□□□ -0.41
CHGA-201ENST00000216492 TM2D2Q9BX73 214 aa12.49□□□□□ -0.41
CHGA-201ENST00000216492 IGHV3-16A0A0C4DH30 117 aa12.48□□□□□ -0.41
CHGA-201ENST00000216492 VCYO14598 125 aa12.48□□□□□ -0.41
CHGA-201ENST00000216492 UFSP1Q6NVU6 142 aa12.48□□□□□ -0.41
CHGA-201ENST00000216492 A0A1W2PPM0 123 aa12.47□□□□□ -0.41
CHGA-201ENST00000216492 FXYD2P54710 66 aa12.47□□□□□ -0.41
CHGA-201ENST00000216492 A0A087WWL8 130 aa12.47□□□□□ -0.41
CHGA-201ENST00000216492 KNCNA6PVL3 124 aa12.47□□□□□ -0.41
CHGA-201ENST00000216492 MAPKAPK5-AS1Q8N8E1 139 aa12.47□□□□□ -0.41
CHGA-201ENST00000216492 CITED1Q99966 193 aa12.47□□□□□ -0.41
CHGA-201ENST00000216492 MAP6D1Q9H9H5 199 aa12.47□□□□□ -0.41
CHGA-201ENST00000216492 PRSS29PA6NIE9 313 aa12.46□□□□□ -0.41
CHGA-201ENST00000216492 FABP2P12104 132 aa12.46□□□□□ -0.41
CHGA-201ENST00000216492 OR5A1Q8NGJ0 315 aa12.46□□□□□ -0.41
CHGA-201ENST00000216492 TRAV12-2A0A075B6T6 113 aa12.46□□□□□ -0.42
CHGA-201ENST00000216492 IGHV1OR15-1A0A075B7D0 117 aa12.46□□□□□ -0.42
CHGA-201ENST00000216492 IGLV1-51P01701 117 aa12.46□□□□□ -0.42
CHGA-201ENST00000216492 POLR2KP53803 58 aaKnown RBP12.46□□□□□ -0.42
CHGA-201ENST00000216492 LINC00482Q8N8I6 264 aa12.46□□□□□ -0.42
CHGA-201ENST00000216492 JPT2Q9H910 190 aa12.46□□□□□ -0.42
CHGA-201ENST00000216492 MYMXA0A1B0GTQ4 84 aa12.45□□□□□ -0.42
CHGA-201ENST00000216492 PAPPA-AS1Q5QFB9 102 aa12.45□□□□□ -0.42
CHGA-201ENST00000216492 SAMD5Q5TGI4 173 aa12.45□□□□□ -0.42
CHGA-201ENST00000216492 ZFP2Q6ZN57 461 aa12.45□□□□□ -0.42
CHGA-201ENST00000216492 NEGR1Q7Z3B1 354 aa12.45□□□□□ -0.42
CHGA-201ENST00000216492 NAA38Q9BRA0 125 aaKnown RBP12.45□□□□□ -0.42
CHGA-201ENST00000216492 TP53TG1Q9Y2A0 90 aa12.45□□□□□ -0.42
CHGA-201ENST00000216492 SPCS1Q9Y6A9 102 aa12.45□□□□□ -0.42
CHGA-201ENST00000216492 MUC4Q99102 2169 aa12.45□□□□□ -0.42
CHGA-201ENST00000216492 TRBV6-5A0A0K0K1A5 114 aa12.44□□□□□ -0.42
CHGA-201ENST00000216492 H3BMM0 161 aa12.44□□□□□ -0.42
CHGA-201ENST00000216492 SPINK13Q1W4C9 94 aa12.44□□□□□ -0.42
CHGA-201ENST00000216492 FAM74A4Q5TZK3 123 aa12.44□□□□□ -0.42
CHGA-201ENST00000216492 Q8N1Y9 231 aa12.44□□□□□ -0.42
CHGA-201ENST00000216492 TMEM141Q96I45 108 aa12.44□□□□□ -0.42
CHGA-201ENST00000216492 E9PLD3 99 aa12.44□□□□□ -0.42
CHGA-201ENST00000216492 HIST1H4GQ99525 98 aa12.44□□□□□ -0.42
CHGA-201ENST00000216492 NHP2Q9NX24 153 aaKnown RBP12.44□□□□□ -0.42
CHGA-201ENST00000216492 TEP1Q99973 2627 aaKnown RBP12.44□□□□□ -0.42
CHGA-201ENST00000216492 TRGV11A0A075B6L2 103 aa12.43□□□□□ -0.42
CHGA-201ENST00000216492 SDHAF1A6NFY7 115 aa12.43□□□□□ -0.42
CHGA-201ENST00000216492 ZNF56Q15929 161 aa12.43□□□□□ -0.42
CHGA-201ENST00000216492 AMTNQ6UX39 209 aa12.43□□□□□ -0.42
CHGA-201ENST00000216492 MDFICQ9P1T7 246 aa12.43□□□□□ -0.42
CHGA-201ENST00000216492 TRBV27A0A0K0K1C4 114 aa12.42□□□□□ -0.42
CHGA-201ENST00000216492 TIMM17AQ99595 171 aa12.42□□□□□ -0.42
CHGA-201ENST00000216492 RIPPLY3P57055 190 aa12.42□□□□□ -0.42
CHGA-201ENST00000216492 PMVKQ15126 192 aa12.42□□□□□ -0.42
CHGA-201ENST00000216492 ODF3L2Q3SX64 289 aa12.42□□□□□ -0.42
CHGA-201ENST00000216492 IGIPA6NJ69 53 aa12.41□□□□□ -0.42
CHGA-201ENST00000216492 HERVK_113P61574 105 aa12.41□□□□□ -0.42
CHGA-201ENST00000216492 TRPT1Q86TN4 253 aaKnown RBP12.41□□□□□ -0.42
CHGA-201ENST00000216492 PRADC1Q9BSG0 188 aa12.41□□□□□ -0.42
CHGA-201ENST00000216492 AGRNO00468 2067 aa12.41□□□□□ -0.42
CHGA-201ENST00000216492 TMEM238LA0A1B0GVL6 79 aa12.41□□□□□ -0.42
CHGA-201ENST00000216492 K7ERJ3 54 aa12.41□□□□□ -0.42
CHGA-201ENST00000216492 KRTAP24-1Q3LI83 254 aa12.41□□□□□ -0.42
CHGA-201ENST00000216492 A8MTW9 85 aa12.4□□□□□ -0.42
CHGA-201ENST00000216492 CMC4P56277 68 aaPredicted RBP12.4□□□□□ -0.42
CHGA-201ENST00000216492 PHLDA1Q8WV24 401 aaPredicted RBP12.4□□□□□ -0.42
CHGA-201ENST00000216492 ATRQ13535 2644 aa12.4□□□□□ -0.42
CHGA-201ENST00000216492 G3V4G9 280 aa12.39□□□□□ -0.43
CHGA-201ENST00000216492 M0QY20 66 aa12.39□□□□□ -0.43
CHGA-201ENST00000216492 CRYGDP07320 174 aa12.39□□□□□ -0.43
CHGA-201ENST00000216492 RHOHQ15669 191 aa12.39□□□□□ -0.43
CHGA-201ENST00000216492 TSHBP01222 138 aa12.39□□□□□ -0.43
CHGA-201ENST00000216492 TRBV7-3A0A075B6L6 115 aa12.38□□□□□ -0.43
CHGA-201ENST00000216492 ZNF876PQ49A33 203 aa12.38□□□□□ -0.43
CHGA-201ENST00000216492 TENM1Q9UKZ4 2725 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms