RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 PRSS1P07477 247 aa13.42□□□□□ -0.26
CTSA-201ENST00000191018 CTAG1AP78358 180 aa13.42□□□□□ -0.26
CTSA-201ENST00000191018 C2orf66Q6UXQ4 117 aa13.42□□□□□ -0.26
CTSA-201ENST00000191018 KIR2DL4Q99706 377 aa13.42□□□□□ -0.26
CTSA-201ENST00000191018 ZMAT4Q9H898 229 aa13.42□□□□□ -0.26
CTSA-201ENST00000191018 DKK2Q9UBU2 259 aa13.42□□□□□ -0.26
CTSA-201ENST00000191018 RS1O15537 224 aa13.42□□□□□ -0.26
CTSA-201ENST00000191018 ZFP2Q6ZN57 461 aa13.42□□□□□ -0.26
CTSA-201ENST00000191018 TEP1Q99973 2627 aaKnown RBP13.42□□□□□ -0.26
CTSA-201ENST00000191018 IGHV3-73A0A0B4J1V6 119 aa13.41□□□□□ -0.26
CTSA-201ENST00000191018 RHODO00212 210 aa13.41□□□□□ -0.26
CTSA-201ENST00000191018 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.4□□□□□ -0.26
CTSA-201ENST00000191018 G0S2P27469 103 aa13.4□□□□□ -0.26
CTSA-201ENST00000191018 RIPPLY3P57055 190 aa13.4□□□□□ -0.26
CTSA-201ENST00000191018 GTSCR1Q86UQ5 136 aa13.4□□□□□ -0.26
CTSA-201ENST00000191018 SCGB3A1Q96QR1 104 aa13.4□□□□□ -0.26
CTSA-201ENST00000191018 LINC01549A6NIU2 74 aa13.39□□□□□ -0.27
CTSA-201ENST00000191018 ATRQ13535 2644 aa13.38□□□□□ -0.27
CTSA-201ENST00000191018 PLAC8L1A1L4L8 177 aa13.38□□□□□ -0.27
CTSA-201ENST00000191018 Q6ZN92 141 aa13.38□□□□□ -0.27
CTSA-201ENST00000191018 Q6ZSN1 163 aa13.38□□□□□ -0.27
CTSA-201ENST00000191018 ERASQ7Z444 233 aa13.38□□□□□ -0.27
CTSA-201ENST00000191018 MRPL52Q86TS9 123 aaKnown RBP13.38□□□□□ -0.27
CTSA-201ENST00000191018 WFDC9Q8NEX5 89 aa13.38□□□□□ -0.27
CTSA-201ENST00000191018 CYSLTR1Q9Y271 337 aa13.38□□□□□ -0.27
CTSA-201ENST00000191018 TRAV12-1A0A0B4J245 112 aa13.38□□□□□ -0.27
CTSA-201ENST00000191018 IGHV3-53P01767 116 aa13.38□□□□□ -0.27
CTSA-201ENST00000191018 DAZ2Q13117 558 aaKnown RBP13.38□□□□□ -0.27
CTSA-201ENST00000191018 C16orf74Q96GX8 76 aa13.38□□□□□ -0.27
CTSA-201ENST00000191018 A0A087WX48 190 aa13.37□□□□□ -0.27
CTSA-201ENST00000191018 P0DMU3 169 aa13.37□□□□□ -0.27
CTSA-201ENST00000191018 FAM231AP0DMU4 169 aa13.37□□□□□ -0.27
CTSA-201ENST00000191018 FAM231CP0DMU5 169 aa13.37□□□□□ -0.27
CTSA-201ENST00000191018 SNHG12Q9BXW3 62 aa13.37□□□□□ -0.27
CTSA-201ENST00000191018 TRGV1A0A0A0MS02 117 aa13.36□□□□□ -0.27
CTSA-201ENST00000191018 I3L3M4 83 aa13.36□□□□□ -0.27
CTSA-201ENST00000191018 TSHBP01222 138 aa13.36□□□□□ -0.27
CTSA-201ENST00000191018 RHOHQ15669 191 aa13.36□□□□□ -0.27
CTSA-201ENST00000191018 EREGO14944 169 aa13.36□□□□□ -0.27
CTSA-201ENST00000191018 HNRNPA3P51991 378 aaKnown RBP13.36□□□□□ -0.27
CTSA-201ENST00000191018 ANKRD39Q53RE8 183 aa13.36□□□□□ -0.27
CTSA-201ENST00000191018 NEXN-AS1Q8NBZ9 246 aa13.36□□□□□ -0.27
CTSA-201ENST00000191018 DEFB104AQ8WTQ1 72 aa13.36□□□□□ -0.27
CTSA-201ENST00000191018 HHLA3Q9XRX5 114 aa13.36□□□□□ -0.27
CTSA-201ENST00000191018 TP53TG1Q9Y2A0 90 aa13.36□□□□□ -0.27
CTSA-201ENST00000191018 IGIPA6NJ69 53 aa13.35□□□□□ -0.27
CTSA-201ENST00000191018 IGKCP01834 107 aa13.35□□□□□ -0.27
CTSA-201ENST00000191018 LBHQ53QV2 105 aaPredicted RBP13.35□□□□□ -0.27
CTSA-201ENST00000191018 Q6ZTI0 123 aa13.35□□□□□ -0.27
CTSA-201ENST00000191018 STPG4Q8N801 248 aa13.35□□□□□ -0.27
CTSA-201ENST00000191018 MRPL35Q9NZE8 188 aaKnown RBP13.35□□□□□ -0.27
CTSA-201ENST00000191018 M0R143 59 aa13.34□□□□□ -0.27
CTSA-201ENST00000191018 WIPF1O43516 503 aa13.34□□□□□ -0.27
CTSA-201ENST00000191018 DPM2O94777 84 aa13.34□□□□□ -0.27
CTSA-201ENST00000191018 KRTAP24-1Q3LI83 254 aa13.34□□□□□ -0.27
CTSA-201ENST00000191018 BAALCQ8WXS3 180 aa13.34□□□□□ -0.27
CTSA-201ENST00000191018 Q9UF83 564 aa13.34□□□□□ -0.27
CTSA-201ENST00000191018 MRPS16Q9Y3D3 137 aaKnown RBP13.34□□□□□ -0.27
CTSA-201ENST00000191018 CYSRT1A8MQ03 144 aa13.33□□□□□ -0.27
CTSA-201ENST00000191018 RRN3P1Q2M238 152 aa13.33□□□□□ -0.27
CTSA-201ENST00000191018 SLC25A34Q6PIV7 304 aa13.33□□□□□ -0.27
CTSA-201ENST00000191018 OR4C5Q8NGB2 326 aa13.33□□□□□ -0.27
CTSA-201ENST00000191018 OVOL2Q9BRP0 275 aa13.33□□□□□ -0.27
CTSA-201ENST00000191018 NOP10Q9NPE3 64 aaKnown RBP13.33□□□□□ -0.27
CTSA-201ENST00000191018 COX8AP10176 69 aa13.33□□□□□ -0.28
CTSA-201ENST00000191018 RPL39P62891 51 aaKnown RBP13.33□□□□□ -0.28
CTSA-201ENST00000191018 DNAJC30Q96LL9 226 aa13.33□□□□□ -0.28
CTSA-201ENST00000191018 TIMM17AQ99595 171 aa13.33□□□□□ -0.28
CTSA-201ENST00000191018 TP73-AS1Q9UF72 201 aa13.33□□□□□ -0.28
CTSA-201ENST00000191018 TNFRSF18Q9Y5U5 241 aa13.33□□□□□ -0.28
CTSA-201ENST00000191018 F8VRH5 84 aa13.32□□□□□ -0.28
CTSA-201ENST00000191018 C2orf88Q9BSF0 95 aa13.32□□□□□ -0.28
CTSA-201ENST00000191018 TRAV4A0A0B4J268 109 aa13.31□□□□□ -0.28
CTSA-201ENST00000191018 TMEM141Q96I45 108 aa13.31□□□□□ -0.28
CTSA-201ENST00000191018 ZNF479Q96JC4 524 aa13.31□□□□□ -0.28
CTSA-201ENST00000191018 BAHCC1Q9P281 2608 aa13.31□□□□□ -0.28
CTSA-201ENST00000191018 NOTCH3Q9UM47 2321 aa13.31□□□□□ -0.28
CTSA-201ENST00000191018 C20orf203Q8NBC4 194 aa13.31□□□□□ -0.28
CTSA-201ENST00000191018 PLNP26678 52 aa13.3□□□□□ -0.28
CTSA-201ENST00000191018 FGF6P10767 208 aa13.29□□□□□ -0.28
CTSA-201ENST00000191018 CHTOPQ9Y3Y2 248 aaKnown RBP13.29□□□□□ -0.28
CTSA-201ENST00000191018 PRSS29PA6NIE9 313 aa13.29□□□□□ -0.28
CTSA-201ENST00000191018 ZC2HC1BQ5TFG8 222 aa13.28□□□□□ -0.28
CTSA-201ENST00000191018 BOD1L2Q8IYS8 172 aa13.27□□□□□ -0.29
CTSA-201ENST00000191018 TRBV10-1A0A0K0K1A3 114 aa13.26□□□□□ -0.29
CTSA-201ENST00000191018 CIDEAO60543 219 aa13.26□□□□□ -0.29
CTSA-201ENST00000191018 PMVKQ15126 192 aa13.26□□□□□ -0.29
CTSA-201ENST00000191018 KIR2DL5BQ8NHK3 375 aa13.26□□□□□ -0.29
CTSA-201ENST00000191018 X6R8D5 127 aa13.26□□□□□ -0.29
CTSA-201ENST00000191018 TRRAPQ9Y4A5 3859 aa13.26□□□□□ -0.29
CTSA-201ENST00000191018 GAGE12BA1L429 117 aa13.25□□□□□ -0.29
CTSA-201ENST00000191018 K7EQD1 137 aa13.25□□□□□ -0.29
CTSA-201ENST00000191018 DLEU1O43261 78 aa13.25□□□□□ -0.29
CTSA-201ENST00000191018 GAGE7O76087 117 aa13.25□□□□□ -0.29
CTSA-201ENST00000191018 GAGE12FP0CL80 117 aa13.25□□□□□ -0.29
CTSA-201ENST00000191018 GAGE12GP0CL81 117 aa13.25□□□□□ -0.29
CTSA-201ENST00000191018 GAGE12IP0CL82 117 aa13.25□□□□□ -0.29
CTSA-201ENST00000191018 TCTAP57738 103 aa13.25□□□□□ -0.29
CTSA-201ENST00000191018 IGKV2D-26A0A0A0MRZ7 120 aa13.25□□□□□ -0.29
CTSA-201ENST00000191018 C2orf91Q6ZV80 131 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms