RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 DAZ1Q9NQZ3 744 aaKnown RBP9.4□□□□□ -0.9
TSPAN9-201ENST00000011898 PRRC2AP48634 2157 aaKnown RBP9.4□□□□□ -0.9
TSPAN9-201ENST00000011898 RHODO00212 210 aa9.4□□□□□ -0.9
TSPAN9-201ENST00000011898 HRCT1Q6UXD1 115 aa9.4□□□□□ -0.9
TSPAN9-201ENST00000011898 DYNAPQ8N1N2 210 aa9.4□□□□□ -0.9
TSPAN9-201ENST00000011898 C3orf22Q8N5N4 141 aa9.4□□□□□ -0.9
TSPAN9-201ENST00000011898 CFAP54Q96N23 3096 aa9.4□□□□□ -0.91
TSPAN9-201ENST00000011898 B4DSR2 109 aa9.4□□□□□ -0.91
TSPAN9-201ENST00000011898 TEX22C9J3V5 150 aa9.4□□□□□ -0.91
TSPAN9-201ENST00000011898 SPRY2O43597 315 aa9.4□□□□□ -0.91
TSPAN9-201ENST00000011898 RASL10AQ92737 203 aa9.4□□□□□ -0.91
TSPAN9-201ENST00000011898 LINC00574Q9H8X3 128 aa9.4□□□□□ -0.91
TSPAN9-201ENST00000011898 CLEC2BQ92478 149 aa9.39□□□□□ -0.91
TSPAN9-201ENST00000011898 TMEM141Q96I45 108 aa9.39□□□□□ -0.91
TSPAN9-201ENST00000011898 RBAKDNA6NC62 111 aa9.39□□□□□ -0.91
TSPAN9-201ENST00000011898 NRGNQ92686 78 aa9.39□□□□□ -0.91
TSPAN9-201ENST00000011898 AGPAT4-IT1Q9H0P7 198 aa9.39□□□□□ -0.91
TSPAN9-201ENST00000011898 CRYGCP07315 174 aa9.39□□□□□ -0.91
TSPAN9-201ENST00000011898 LINC00643Q86TS7 51 aa9.39□□□□□ -0.91
TSPAN9-201ENST00000011898 HIST2H2BCQ6DN03 193 aa9.38□□□□□ -0.91
TSPAN9-201ENST00000011898 JPT2Q9H910 190 aa9.38□□□□□ -0.91
TSPAN9-201ENST00000011898 H3BT86 120 aa9.38□□□□□ -0.91
TSPAN9-201ENST00000011898 HOXD3P31249 432 aaPredicted RBP9.38□□□□□ -0.91
TSPAN9-201ENST00000011898 PPDPFQ9H3Y8 114 aa9.38□□□□□ -0.91
TSPAN9-201ENST00000011898 ICOSQ9Y6W8 199 aa9.38□□□□□ -0.91
TSPAN9-201ENST00000011898 ZNF843Q8N446 348 aa9.38□□□□□ -0.91
TSPAN9-201ENST00000011898 IGLV11-55A0A075B6I3 123 aa9.37□□□□□ -0.91
TSPAN9-201ENST00000011898 CTSGP08311 255 aa9.37□□□□□ -0.91
TSPAN9-201ENST00000011898 LINC00322Q6ZN03 302 aaPredicted RBP9.37□□□□□ -0.91
TSPAN9-201ENST00000011898 MAPKAPK5-AS1Q8N8E1 139 aa9.37□□□□□ -0.91
TSPAN9-201ENST00000011898 WFDC11Q8NEX6 87 aa9.37□□□□□ -0.91
TSPAN9-201ENST00000011898 CFAP126Q5VTH2 177 aa9.37□□□□□ -0.91
TSPAN9-201ENST00000011898 IGHV7-81A0A0B4J1V7 117 aa9.37□□□□□ -0.91
TSPAN9-201ENST00000011898 IGHV1-69DA0A0B4J2H0 117 aa9.37□□□□□ -0.91
TSPAN9-201ENST00000011898 IGHV1-69P01742 117 aa9.37□□□□□ -0.91
TSPAN9-201ENST00000011898 C20orf197Q8N268 126 aa9.37□□□□□ -0.91
TSPAN9-201ENST00000011898 ARHGAP32A7KAX9 2087 aa9.36□□□□□ -0.91
TSPAN9-201ENST00000011898 RNASE13Q5GAN3 156 aaKnown RBP9.36□□□□□ -0.91
TSPAN9-201ENST00000011898 PIP4P2Q8N4L2 257 aa9.36□□□□□ -0.91
TSPAN9-201ENST00000011898 PHLDA1Q8WV24 401 aaPredicted RBP9.36□□□□□ -0.91
TSPAN9-201ENST00000011898 Q8N7P7 452 aa9.36□□□□□ -0.91
TSPAN9-201ENST00000011898 C10orf105Q8TEF2 133 aa9.36□□□□□ -0.91
TSPAN9-201ENST00000011898 SPEGQ15772 3267 aa9.36□□□□□ -0.91
TSPAN9-201ENST00000011898 ACANP16112 2415 aa9.35□□□□□ -0.91
TSPAN9-201ENST00000011898 C19orf71A6NCJ1 209 aa9.35□□□□□ -0.91
TSPAN9-201ENST00000011898 NPBQ8NG41 125 aa9.35□□□□□ -0.91
TSPAN9-201ENST00000011898 RHOHQ15669 191 aa9.35□□□□□ -0.91
TSPAN9-201ENST00000011898 MBD6Q96DN6 1003 aa9.35□□□□□ -0.91
TSPAN9-201ENST00000011898 PRB2P02812 416 aaPredicted RBP9.35□□□□□ -0.91
TSPAN9-201ENST00000011898 NSUN5P1Q3KNT7 163 aa9.35□□□□□ -0.91
TSPAN9-201ENST00000011898 FOXE3Q13461 319 aa9.35□□□□□ -0.91
TSPAN9-201ENST00000011898 DEFB121Q5J5C9 76 aa9.35□□□□□ -0.91
TSPAN9-201ENST00000011898 RNF152Q8N8N0 203 aa9.35□□□□□ -0.91
TSPAN9-201ENST00000011898 VPREB3Q9UKI3 123 aa9.35□□□□□ -0.91
TSPAN9-201ENST00000011898 ATP5G1P05496 136 aa9.34□□□□□ -0.91
TSPAN9-201ENST00000011898 MSMBP08118 114 aa9.34□□□□□ -0.91
TSPAN9-201ENST00000011898 CFHR4Q92496 578 aa9.34□□□□□ -0.91
TSPAN9-201ENST00000011898 NDUFA4O00483 81 aa9.34□□□□□ -0.91
TSPAN9-201ENST00000011898 FAM19A5Q7Z5A7 132 aaPredicted RBP9.34□□□□□ -0.91
TSPAN9-201ENST00000011898 RPL39LQ96EH5 51 aaKnown RBP9.34□□□□□ -0.91
TSPAN9-201ENST00000011898 MLST8Q9BVC4 326 aa9.34□□□□□ -0.91
TSPAN9-201ENST00000011898 BUB3O43684 328 aa9.33□□□□□ -0.92
TSPAN9-201ENST00000011898 GHRHP01286 108 aa9.33□□□□□ -0.92
TSPAN9-201ENST00000011898 HOXB4P17483 251 aaPredicted RBP9.33□□□□□ -0.92
TSPAN9-201ENST00000011898 Q6ZQT7 251 aa9.33□□□□□ -0.92
TSPAN9-201ENST00000011898 TRGV2A0A075B6R0 118 aa9.33□□□□□ -0.92
TSPAN9-201ENST00000011898 LOC107984640A0A0U1RRK4 108 aa9.33□□□□□ -0.92
TSPAN9-201ENST00000011898 CENPVL3A0A0U1RRI6 287 aa9.33□□□□□ -0.92
TSPAN9-201ENST00000011898 C11orf86A6NJI1 115 aa9.33□□□□□ -0.92
TSPAN9-201ENST00000011898 F6UB75 175 aa9.33□□□□□ -0.92
TSPAN9-201ENST00000011898 IGHG2P01859 326 aa9.33□□□□□ -0.92
TSPAN9-201ENST00000011898 PFN2P35080 140 aa9.33□□□□□ -0.92
TSPAN9-201ENST00000011898 STHQ8IWL8 128 aa9.33□□□□□ -0.92
TSPAN9-201ENST00000011898 A0A0J9YXV3 536 aa9.32□□□□□ -0.92
TSPAN9-201ENST00000011898 MRPS12O15235 138 aaKnown RBP9.32□□□□□ -0.92
TSPAN9-201ENST00000011898 SPINK13Q1W4C9 94 aa9.32□□□□□ -0.92
TSPAN9-201ENST00000011898 FANCD2OSQ96PS1 177 aa9.32□□□□□ -0.92
TSPAN9-201ENST00000011898 LGALS9O00182 355 aa9.32□□□□□ -0.92
TSPAN9-201ENST00000011898 PSMB8P28062 276 aa9.32□□□□□ -0.92
TSPAN9-201ENST00000011898 DAND5Q8N907 189 aa9.32□□□□□ -0.92
TSPAN9-201ENST00000011898 BBC3Q96PG8 261 aaPredicted RBP9.32□□□□□ -0.92
TSPAN9-201ENST00000011898 Q8N9W7 124 aa9.32□□□□□ -0.92
TSPAN9-201ENST00000011898 MPLKIPQ8TAP9 179 aa9.32□□□□□ -0.92
TSPAN9-201ENST00000011898 WI2-2373I1.2A0A1W2PRP0 233 aa9.32□□□□□ -0.92
TSPAN9-201ENST00000011898 PRAC2D3DTV9 90 aa9.32□□□□□ -0.92
TSPAN9-201ENST00000011898 C6orf226Q5I0X4 101 aa9.32□□□□□ -0.92
TSPAN9-201ENST00000011898 SDIM1Q6ZPB5 146 aa9.32□□□□□ -0.92
TSPAN9-201ENST00000011898 DSCR9P59020 149 aa9.31□□□□□ -0.92
TSPAN9-201ENST00000011898 LRRC75A-AS1Q8N1F1 130 aa9.31□□□□□ -0.92
TSPAN9-201ENST00000011898 TRAV23DV6A0A075B6W5 121 aa9.31□□□□□ -0.92
TSPAN9-201ENST00000011898 U3KQE9 123 aa9.31□□□□□ -0.92
TSPAN9-201ENST00000011898 DSCAMO60469 2012 aa9.31□□□□□ -0.92
TSPAN9-201ENST00000011898 CSDC2Q9Y534 153 aaKnown RBP9.31□□□□□ -0.92
TSPAN9-201ENST00000011898 TRAV12-2A0A075B6T6 113 aa9.3□□□□□ -0.92
TSPAN9-201ENST00000011898 PIFOQ8TCI5 191 aa9.3□□□□□ -0.92
TSPAN9-201ENST00000011898 DSCR8Q96T75 97 aa9.3□□□□□ -0.92
TSPAN9-201ENST00000011898 DEFB131AP59861 70 aa9.3□□□□□ -0.92
TSPAN9-201ENST00000011898 GNRH2O43555 120 aa9.29□□□□□ -0.92
TSPAN9-201ENST00000011898 KLK9Q9UKQ9 250 aa9.29□□□□□ -0.92
TSPAN9-201ENST00000011898 KLK5Q9Y337 293 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms