RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 CSTL1Q9H114 145 aa12.71□□□□□ -0.38
PHGDH-232ENST00000641947 TNFRSF6BO95407 300 aa12.7□□□□□ -0.38
PHGDH-232ENST00000641947 FAM19A2Q8N3H0 131 aa12.7□□□□□ -0.38
PHGDH-232ENST00000641947 SYT8Q8NBV8 401 aa12.7□□□□□ -0.38
PHGDH-232ENST00000641947 C1QTNF4Q9BXJ3 329 aa12.7□□□□□ -0.38
PHGDH-232ENST00000641947 LOC389332A0A1B0GUA5 103 aa12.69□□□□□ -0.38
PHGDH-232ENST00000641947 PPBPP02775 128 aa12.69□□□□□ -0.38
PHGDH-232ENST00000641947 CRYGDP07320 174 aa12.69□□□□□ -0.38
PHGDH-232ENST00000641947 PMCHP20382 165 aa12.69□□□□□ -0.38
PHGDH-232ENST00000641947 IFI27P40305 119 aaPredicted RBP12.69□□□□□ -0.38
PHGDH-232ENST00000641947 GOLT1BQ9Y3E0 138 aa12.69□□□□□ -0.38
PHGDH-232ENST00000641947 PLAC8L1A1L4L8 177 aa12.69□□□□□ -0.38
PHGDH-232ENST00000641947 M0R2P5 195 aa12.69□□□□□ -0.38
PHGDH-232ENST00000641947 TMEM18Q96B42 140 aa12.69□□□□□ -0.38
PHGDH-232ENST00000641947 MDFIQ99750 246 aa12.69□□□□□ -0.38
PHGDH-232ENST00000641947 LINC00614P0C842 121 aa12.68□□□□□ -0.38
PHGDH-232ENST00000641947 PMCHL1Q16048 86 aa12.68□□□□□ -0.38
PHGDH-232ENST00000641947 FAM74A4Q5TZK3 123 aa12.68□□□□□ -0.38
PHGDH-232ENST00000641947 RASL10AQ92737 203 aa12.68□□□□□ -0.38
PHGDH-232ENST00000641947 MRAP2Q96G30 205 aa12.68□□□□□ -0.38
PHGDH-232ENST00000641947 MRPL16Q9NX20 251 aaKnown RBP12.68□□□□□ -0.38
PHGDH-232ENST00000641947 EGFEM1PQ0D2K5 195 aa12.67□□□□□ -0.38
PHGDH-232ENST00000641947 SUMO4Q6EEV6 95 aa12.67□□□□□ -0.38
PHGDH-232ENST00000641947 TMEM263Q8WUH6 116 aaKnown RBP12.67□□□□□ -0.38
PHGDH-232ENST00000641947 RPL39LQ96EH5 51 aaKnown RBP12.67□□□□□ -0.38
PHGDH-232ENST00000641947 AMTP48728 403 aa12.66□□□□□ -0.38
PHGDH-232ENST00000641947 PTH2Q96A98 100 aa12.66□□□□□ -0.38
PHGDH-232ENST00000641947 LAMTOR2Q9Y2Q5 125 aa12.66□□□□□ -0.38
PHGDH-232ENST00000641947 IGHV1-24A0A0C4DH33 117 aa12.66□□□□□ -0.38
PHGDH-232ENST00000641947 G3V4G9 280 aa12.66□□□□□ -0.38
PHGDH-232ENST00000641947 HSBP1O75506 76 aa12.66□□□□□ -0.38
PHGDH-232ENST00000641947 SMIM17P0DL12 118 aa12.66□□□□□ -0.38
PHGDH-232ENST00000641947 Q6ZWC4 215 aa12.66□□□□□ -0.38
PHGDH-232ENST00000641947 CHCHD1Q96BP2 118 aaKnown RBP12.66□□□□□ -0.38
PHGDH-232ENST00000641947 SPXQ9BT56 116 aa12.66□□□□□ -0.38
PHGDH-232ENST00000641947 IGHV4-30-4P0DP06 118 aa12.65□□□□□ -0.38
PHGDH-232ENST00000641947 UFSP1Q6NVU6 142 aa12.65□□□□□ -0.38
PHGDH-232ENST00000641947 NOTCH1P46531 2555 aa12.65□□□□□ -0.38
PHGDH-232ENST00000641947 NBEAL1Q6ZS30 2694 aa12.65□□□□□ -0.38
PHGDH-232ENST00000641947 IGLV2-18A0A075B6J9 118 aa12.64□□□□□ -0.39
PHGDH-232ENST00000641947 PYY3Q5JQD4 70 aa12.64□□□□□ -0.39
PHGDH-232ENST00000641947 PRSS3P2Q8NHM4 247 aa12.64□□□□□ -0.39
PHGDH-232ENST00000641947 MAP1LC3AQ9H492 121 aa12.64□□□□□ -0.39
PHGDH-232ENST00000641947 PIK3CD-AS1Q5SR53 167 aa12.64□□□□□ -0.39
PHGDH-232ENST00000641947 A0A096LNJ9 63 aa12.63□□□□□ -0.39
PHGDH-232ENST00000641947 IGHV3-73A0A0B4J1V6 119 aa12.63□□□□□ -0.39
PHGDH-232ENST00000641947 CFAP126Q5VTH2 177 aa12.63□□□□□ -0.39
PHGDH-232ENST00000641947 FA2HQ7L5A8 372 aa12.63□□□□□ -0.39
PHGDH-232ENST00000641947 LINC00518Q8N0U6 118 aa12.63□□□□□ -0.39
PHGDH-232ENST00000641947 X6R8D5 127 aa12.63□□□□□ -0.39
PHGDH-232ENST00000641947 PRSS47A8MTI9 375 aa12.62□□□□□ -0.39
PHGDH-232ENST00000641947 ZNF56Q15929 161 aa12.62□□□□□ -0.39
PHGDH-232ENST00000641947 RRN3P1Q2M238 152 aa12.62□□□□□ -0.39
PHGDH-232ENST00000641947 CDPF1Q6NVV7 123 aa12.62□□□□□ -0.39
PHGDH-232ENST00000641947 Q6ZTI0 123 aa12.62□□□□□ -0.39
PHGDH-232ENST00000641947 C16orf74Q96GX8 76 aa12.62□□□□□ -0.39
PHGDH-232ENST00000641947 AP5S1Q9NUS5 200 aa12.62□□□□□ -0.39
PHGDH-232ENST00000641947 TRGV1A0A0A0MS02 117 aa12.61□□□□□ -0.39
PHGDH-232ENST00000641947 KIR2DL5BA0A0G2JN68 375 aa12.61□□□□□ -0.39
PHGDH-232ENST00000641947 KIR2DL5BA0A0G2JPC4 375 aa12.61□□□□□ -0.39
PHGDH-232ENST00000641947 F5H697 171 aa12.61□□□□□ -0.39
PHGDH-232ENST00000641947 DEFB135Q30KP9 77 aa12.61□□□□□ -0.39
PHGDH-232ENST00000641947 KIR2DL5AQ8N109 375 aa12.61□□□□□ -0.39
PHGDH-232ENST00000641947 KIR2DL5BQ8NHK3 375 aa12.61□□□□□ -0.39
PHGDH-232ENST00000641947 NOP10Q9NPE3 64 aaKnown RBP12.61□□□□□ -0.39
PHGDH-232ENST00000641947 LINC01546A6NGU7 62 aa12.61□□□□□ -0.39
PHGDH-232ENST00000641947 A8MWV9 139 aa12.61□□□□□ -0.39
PHGDH-232ENST00000641947 M0QY20 66 aa12.61□□□□□ -0.39
PHGDH-232ENST00000641947 Q6ZSN1 163 aa12.61□□□□□ -0.39
PHGDH-232ENST00000641947 LINC00173Q6ZV60 143 aa12.61□□□□□ -0.39
PHGDH-232ENST00000641947 RS1O15537 224 aa12.6□□□□□ -0.39
PHGDH-232ENST00000641947 DAZ2Q13117 558 aaKnown RBP12.6□□□□□ -0.39
PHGDH-232ENST00000641947 SAMD5Q5TGI4 173 aa12.6□□□□□ -0.39
PHGDH-232ENST00000641947 Q8N8P6 123 aa12.6□□□□□ -0.39
PHGDH-232ENST00000641947 SMIM6P0DI80 62 aa12.59□□□□□ -0.39
PHGDH-232ENST00000641947 APOC4P55056 127 aa12.59□□□□□ -0.39
PHGDH-232ENST00000641947 SUMO2P61956 95 aaKnown RBP12.59□□□□□ -0.39
PHGDH-232ENST00000641947 SMIM2Q9BVW6 85 aa12.59□□□□□ -0.39
PHGDH-232ENST00000641947 C12orf57Q99622 126 aa12.58□□□□□ -0.39
PHGDH-232ENST00000641947 NXT2Q9NPJ8 142 aaKnown RBP12.58□□□□□ -0.39
PHGDH-232ENST00000641947 P0DMU3 169 aa12.58□□□□□ -0.4
PHGDH-232ENST00000641947 FAM231AP0DMU4 169 aa12.58□□□□□ -0.4
PHGDH-232ENST00000641947 FAM231CP0DMU5 169 aa12.58□□□□□ -0.4
PHGDH-232ENST00000641947 NEGR1Q7Z3B1 354 aa12.58□□□□□ -0.4
PHGDH-232ENST00000641947 C20orf78Q9BR46 151 aa12.58□□□□□ -0.4
PHGDH-232ENST00000641947 OVOL2Q9BRP0 275 aa12.58□□□□□ -0.4
PHGDH-232ENST00000641947 Q9UF83 564 aa12.58□□□□□ -0.4
PHGDH-232ENST00000641947 TCAPO15273 167 aa12.57□□□□□ -0.4
PHGDH-232ENST00000641947 JOSD1Q15040 202 aaPredicted RBP12.57□□□□□ -0.4
PHGDH-232ENST00000641947 LGALS9BQ3B8N2 356 aa12.56□□□□□ -0.4
PHGDH-232ENST00000641947 ZNF479Q96JC4 524 aa12.56□□□□□ -0.4
PHGDH-232ENST00000641947 NDUFAF3Q9BU61 184 aa12.56□□□□□ -0.4
PHGDH-232ENST00000641947 C3orf79P0CE67 100 aa12.56□□□□□ -0.4
PHGDH-232ENST00000641947 EMP1P54849 157 aa12.56□□□□□ -0.4
PHGDH-232ENST00000641947 EDA2RQ9HAV5 297 aa12.56□□□□□ -0.4
PHGDH-232ENST00000641947 POLR2KP53803 58 aaKnown RBP12.55□□□□□ -0.4
PHGDH-232ENST00000641947 Q8N976 141 aa12.55□□□□□ -0.4
PHGDH-232ENST00000641947 TMEM70Q9BUB7 260 aa12.55□□□□□ -0.4
PHGDH-232ENST00000641947 MGAM2Q2M2H8 2515 aa12.55□□□□□ -0.4
PHGDH-232ENST00000641947 DNHD1Q96M86 4753 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms