RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 H3BMM0 161 aa13.19□□□□□ -0.3
PHGDH-226ENST00000641756 ODF1Q14990 250 aa13.19□□□□□ -0.3
PHGDH-226ENST00000641756 UNC79Q9P2D8 2635 aa13.19□□□□□ -0.3
PHGDH-226ENST00000641756 COL5A1-AS1Q5SY13 56 aa13.18□□□□□ -0.3
PHGDH-226ENST00000641756 FAM74A4Q5TZK3 123 aa13.18□□□□□ -0.3
PHGDH-226ENST00000641756 SUMO4Q6EEV6 95 aa13.18□□□□□ -0.3
PHGDH-226ENST00000641756 NEGR1Q7Z3B1 354 aa13.18□□□□□ -0.3
PHGDH-226ENST00000641756 MAP6D1Q9H9H5 199 aa13.18□□□□□ -0.3
PHGDH-226ENST00000641756 TRAV2A0A0B4J234 112 aa13.18□□□□□ -0.3
PHGDH-226ENST00000641756 F5H697 171 aa13.18□□□□□ -0.3
PHGDH-226ENST00000641756 COX8AP10176 69 aa13.18□□□□□ -0.3
PHGDH-226ENST00000641756 HTN1P15515 57 aa13.18□□□□□ -0.3
PHGDH-226ENST00000641756 CITED2Q99967 270 aaPredicted RBP13.18□□□□□ -0.3
PHGDH-226ENST00000641756 LINC01006Q8NI28 216 aa13.17□□□□□ -0.3
PHGDH-226ENST00000641756 SMR3AQ99954 134 aa13.17□□□□□ -0.3
PHGDH-226ENST00000641756 CBY3A6NI87 242 aa13.16□□□□□ -0.3
PHGDH-226ENST00000641756 CCL24O00175 119 aa13.16□□□□□ -0.3
PHGDH-226ENST00000641756 ATP5LO75964 103 aa13.16□□□□□ -0.3
PHGDH-226ENST00000641756 RNASE1P07998 156 aaKnown RBP13.16□□□□□ -0.3
PHGDH-226ENST00000641756 DEFB104AQ8WTQ1 72 aa13.16□□□□□ -0.3
PHGDH-226ENST00000641756 CSTL1Q9H114 145 aa13.16□□□□□ -0.3
PHGDH-226ENST00000641756 ORMDL2Q53FV1 153 aa13.16□□□□□ -0.3
PHGDH-226ENST00000641756 SYT8Q8NBV8 401 aa13.16□□□□□ -0.3
PHGDH-226ENST00000641756 PRM2P04554 102 aa13.15□□□□□ -0.3
PHGDH-226ENST00000641756 PPP1R17O96001 155 aa13.15□□□□□ -0.3
PHGDH-226ENST00000641756 G0S2P27469 103 aa13.15□□□□□ -0.3
PHGDH-226ENST00000641756 FHL3Q13643 280 aa13.15□□□□□ -0.3
PHGDH-226ENST00000641756 MPV17L2Q567V2 206 aa13.15□□□□□ -0.3
PHGDH-226ENST00000641756 WNK1Q9H4A3 2382 aa13.14□□□□□ -0.31
PHGDH-226ENST00000641756 TRGV11A0A075B6L2 103 aa13.14□□□□□ -0.31
PHGDH-226ENST00000641756 A8MTW9 85 aa13.14□□□□□ -0.31
PHGDH-226ENST00000641756 MTORP42345 2549 aa13.14□□□□□ -0.31
PHGDH-226ENST00000641756 FASNP49327 2511 aaKnown RBP13.14□□□□□ -0.31
PHGDH-226ENST00000641756 FGF6P10767 208 aa13.13□□□□□ -0.31
PHGDH-226ENST00000641756 ZMAT4Q9H898 229 aa13.13□□□□□ -0.31
PHGDH-226ENST00000641756 ZNF256Q9Y2P7 627 aaPredicted RBP13.13□□□□□ -0.31
PHGDH-226ENST00000641756 IGKCP01834 107 aa13.13□□□□□ -0.31
PHGDH-226ENST00000641756 ZNF56Q15929 161 aa13.13□□□□□ -0.31
PHGDH-226ENST00000641756 ZNF876PQ49A33 203 aa13.13□□□□□ -0.31
PHGDH-226ENST00000641756 TOMM6Q96B49 74 aa13.13□□□□□ -0.31
PHGDH-226ENST00000641756 SPAG8Q99932 426 aaPredicted RBP13.13□□□□□ -0.31
PHGDH-226ENST00000641756 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.12□□□□□ -0.31
PHGDH-226ENST00000641756 CRYGDP07320 174 aa13.12□□□□□ -0.31
PHGDH-226ENST00000641756 ZNF25P17030 456 aaPredicted RBP13.12□□□□□ -0.31
PHGDH-226ENST00000641756 NMUP48645 174 aa13.12□□□□□ -0.31
PHGDH-226ENST00000641756 C2orf91Q6ZV80 131 aa13.12□□□□□ -0.31
PHGDH-226ENST00000641756 SCGB3A1Q96QR1 104 aa13.12□□□□□ -0.31
PHGDH-226ENST00000641756 C16orf95Q9H693 158 aa13.12□□□□□ -0.31
PHGDH-226ENST00000641756 MRPL35Q9NZE8 188 aaKnown RBP13.12□□□□□ -0.31
PHGDH-226ENST00000641756 TSSC4Q9Y5U2 329 aaPredicted RBP13.12□□□□□ -0.31
PHGDH-226ENST00000641756 C2orf66Q6UXQ4 117 aa13.12□□□□□ -0.31
PHGDH-226ENST00000641756 TMEM160Q9NX00 188 aa13.12□□□□□ -0.31
PHGDH-226ENST00000641756 HHLA3Q9XRX5 114 aa13.12□□□□□ -0.31
PHGDH-226ENST00000641756 DPM2O94777 84 aa13.11□□□□□ -0.31
PHGDH-226ENST00000641756 ZNF418Q8TF45 676 aaPredicted RBP13.11□□□□□ -0.31
PHGDH-226ENST00000641756 GCN1Q92616 2671 aaKnown RBP13.11□□□□□ -0.31
PHGDH-226ENST00000641756 K7EMI3 77 aa13.1□□□□□ -0.31
PHGDH-226ENST00000641756 PCP2Q8IVA1 136 aa13.1□□□□□ -0.31
PHGDH-226ENST00000641756 POLR2KP53803 58 aaKnown RBP13.1□□□□□ -0.31
PHGDH-226ENST00000641756 ODF3L2Q3SX64 289 aa13.1□□□□□ -0.31
PHGDH-226ENST00000641756 Q6ZVH6 145 aa13.1□□□□□ -0.31
PHGDH-226ENST00000641756 SETD2Q9BYW2 2564 aaPredicted RBP13.1□□□□□ -0.31
PHGDH-226ENST00000641756 A0A087WX48 190 aa13.09□□□□□ -0.31
PHGDH-226ENST00000641756 SDHAF1A6NFY7 115 aa13.09□□□□□ -0.31
PHGDH-226ENST00000641756 HILS1P60008 231 aa13.09□□□□□ -0.31
PHGDH-226ENST00000641756 SCGB2A2Q13296 93 aa13.09□□□□□ -0.31
PHGDH-226ENST00000641756 MORN3Q6PF18 240 aaPredicted RBP13.09□□□□□ -0.31
PHGDH-226ENST00000641756 GTSCR1Q86UQ5 136 aa13.09□□□□□ -0.31
PHGDH-226ENST00000641756 BOD1L2Q8IYS8 172 aa13.09□□□□□ -0.31
PHGDH-226ENST00000641756 IGKV2D-26A0A0A0MRZ7 120 aa13.09□□□□□ -0.31
PHGDH-226ENST00000641756 BVES-AS1Q5T3Y7 98 aa13.09□□□□□ -0.31
PHGDH-226ENST00000641756 M0QY20 66 aa13.08□□□□□ -0.32
PHGDH-226ENST00000641756 ZC2HC1BQ5TFG8 222 aa13.08□□□□□ -0.32
PHGDH-226ENST00000641756 TRAV25A0A0B4J276 109 aa13.07□□□□□ -0.32
PHGDH-226ENST00000641756 RPL32P62910 135 aaKnown RBP13.07□□□□□ -0.32
PHGDH-226ENST00000641756 LINC01587Q99440 93 aa13.07□□□□□ -0.32
PHGDH-226ENST00000641756 HECTD1Q9ULT8 2610 aa13.07□□□□□ -0.32
PHGDH-226ENST00000641756 IGHV3-73A0A0B4J1V6 119 aa13.07□□□□□ -0.32
PHGDH-226ENST00000641756 VCYO14598 125 aa13.07□□□□□ -0.32
PHGDH-226ENST00000641756 ZFP2Q6ZN57 461 aa13.07□□□□□ -0.32
PHGDH-226ENST00000641756 TMEM208Q9BTX3 173 aa13.07□□□□□ -0.32
PHGDH-226ENST00000641756 TTTY13Q9BZ97 58 aa13.06□□□□□ -0.32
PHGDH-226ENST00000641756 C12orf54Q6X4T0 127 aa13.06□□□□□ -0.32
PHGDH-226ENST00000641756 NEXN-AS1Q8NBZ9 246 aa13.06□□□□□ -0.32
PHGDH-226ENST00000641756 BAALCQ8WXS3 180 aa13.06□□□□□ -0.32
PHGDH-226ENST00000641756 KIR2DL4Q99706 377 aa13.06□□□□□ -0.32
PHGDH-226ENST00000641756 TP53TG1Q9Y2A0 90 aa13.06□□□□□ -0.32
PHGDH-226ENST00000641756 TRAV12-1A0A0B4J245 112 aa13.05□□□□□ -0.32
PHGDH-226ENST00000641756 TRBV6-5A0A0K0K1A5 114 aa13.05□□□□□ -0.32
PHGDH-226ENST00000641756 INSP01308 110 aa13.05□□□□□ -0.32
PHGDH-226ENST00000641756 NSUN5P1Q3KNT7 163 aa13.05□□□□□ -0.32
PHGDH-226ENST00000641756 XCL2Q9UBD3 114 aa13.05□□□□□ -0.32
PHGDH-226ENST00000641756 CHTOPQ9Y3Y2 248 aaKnown RBP13.05□□□□□ -0.32
PHGDH-226ENST00000641756 H7C1H1 209 aa13.04□□□□□ -0.32
PHGDH-226ENST00000641756 SAP30O75446 220 aa13.04□□□□□ -0.32
PHGDH-226ENST00000641756 LY6G6DO95868 133 aa13.04□□□□□ -0.32
PHGDH-226ENST00000641756 RPL39P62891 51 aaKnown RBP13.04□□□□□ -0.32
PHGDH-226ENST00000641756 ERASQ7Z444 233 aa13.04□□□□□ -0.32
PHGDH-226ENST00000641756 STHQ8IWL8 128 aa13.04□□□□□ -0.32
PHGDH-226ENST00000641756 CYSLTR1Q9Y271 337 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms