RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 PRELID3AQ96N28 172 aa9.48□□□□□ -0.89
PHGDH-221ENST00000641573 SPXQ9BT56 116 aa9.48□□□□□ -0.89
PHGDH-221ENST00000641573 M0R2P5 195 aa9.47□□□□□ -0.89
PHGDH-221ENST00000641573 NUPR1O60356 82 aa9.47□□□□□ -0.89
PHGDH-221ENST00000641573 SERF1AO75920 110 aa9.47□□□□□ -0.89
PHGDH-221ENST00000641573 NCR2O95944 276 aa9.47□□□□□ -0.89
PHGDH-221ENST00000641573 PPBPP02775 128 aa9.47□□□□□ -0.89
PHGDH-221ENST00000641573 SMIM17P0DL12 118 aa9.47□□□□□ -0.89
PHGDH-221ENST00000641573 LINC00310P59036 64 aa9.47□□□□□ -0.89
PHGDH-221ENST00000641573 ZNF876PQ49A33 203 aa9.47□□□□□ -0.89
PHGDH-221ENST00000641573 JPT2Q9H910 190 aa9.47□□□□□ -0.89
PHGDH-221ENST00000641573 ZMAT5Q9UDW3 170 aaKnown RBP9.47□□□□□ -0.89
PHGDH-221ENST00000641573 KIF25-AS1Q9Y6Z4 181 aa9.47□□□□□ -0.89
PHGDH-221ENST00000641573 KIR2DL5BA0A0G2JN68 375 aa9.46□□□□□ -0.9
PHGDH-221ENST00000641573 KIR2DL5BA0A0G2JPC4 375 aa9.46□□□□□ -0.9
PHGDH-221ENST00000641573 IFITM10A6NMD0 228 aa9.46□□□□□ -0.9
PHGDH-221ENST00000641573 MGPP08493 103 aa9.46□□□□□ -0.9
PHGDH-221ENST00000641573 NHLRC4P0CG21 123 aaPredicted RBP9.46□□□□□ -0.9
PHGDH-221ENST00000641573 S100A2P29034 98 aa9.46□□□□□ -0.9
PHGDH-221ENST00000641573 APOC4P55056 127 aa9.46□□□□□ -0.9
PHGDH-221ENST00000641573 ZNF705AQ6ZN79 300 aaPredicted RBP9.46□□□□□ -0.9
PHGDH-221ENST00000641573 KIR2DL5AQ8N109 375 aa9.46□□□□□ -0.9
PHGDH-221ENST00000641573 KIR2DL5BQ8NHK3 375 aa9.46□□□□□ -0.9
PHGDH-221ENST00000641573 PTH2Q96A98 100 aa9.46□□□□□ -0.9
PHGDH-221ENST00000641573 MRAP2Q96G30 205 aa9.46□□□□□ -0.9
PHGDH-221ENST00000641573 A0A087WWL8 130 aa9.45□□□□□ -0.9
PHGDH-221ENST00000641573 TRAV26-2A0A0B4J265 109 aa9.45□□□□□ -0.9
PHGDH-221ENST00000641573 GAS8-AS1O95177 125 aa9.45□□□□□ -0.9
PHGDH-221ENST00000641573 NPYP01303 97 aa9.45□□□□□ -0.9
PHGDH-221ENST00000641573 IGHV4-30-4P0DP06 118 aa9.45□□□□□ -0.9
PHGDH-221ENST00000641573 ESDP10768 282 aa9.45□□□□□ -0.9
PHGDH-221ENST00000641573 GATA1P15976 413 aaPredicted RBP9.45□□□□□ -0.9
PHGDH-221ENST00000641573 LINC00315P59091 139 aa9.45□□□□□ -0.9
PHGDH-221ENST00000641573 NIT1Q86X76 327 aa9.45□□□□□ -0.9
PHGDH-221ENST00000641573 POM121L12Q8N7R1 296 aa9.45□□□□□ -0.9
PHGDH-221ENST00000641573 IL17DQ8TAD2 202 aa9.45□□□□□ -0.9
PHGDH-221ENST00000641573 RNASE8Q8TDE3 154 aaKnown RBP9.45□□□□□ -0.9
PHGDH-221ENST00000641573 TMEM263Q8WUH6 116 aaKnown RBP9.45□□□□□ -0.9
PHGDH-221ENST00000641573 TENM2Q9NT68 2774 aa9.45□□□□□ -0.9
PHGDH-221ENST00000641573 DNAH9Q9NYC9 4486 aa9.44□□□□□ -0.9
PHGDH-221ENST00000641573 MUC4Q99102 2169 aa9.44□□□□□ -0.9
PHGDH-221ENST00000641573 AKR1D1P51857 326 aa9.44□□□□□ -0.9
PHGDH-221ENST00000641573 RRN3P1Q2M238 152 aa9.44□□□□□ -0.9
PHGDH-221ENST00000641573 PIK3CD-AS1Q5SR53 167 aa9.44□□□□□ -0.9
PHGDH-221ENST00000641573 C16orf74Q96GX8 76 aa9.44□□□□□ -0.9
PHGDH-221ENST00000641573 URB1-AS1Q96HZ7 61 aa9.44□□□□□ -0.9
PHGDH-221ENST00000641573 SAMD10Q9BYL1 202 aa9.44□□□□□ -0.9
PHGDH-221ENST00000641573 LAMTOR2Q9Y2Q5 125 aa9.44□□□□□ -0.9
PHGDH-221ENST00000641573 RYR2Q92736 4967 aa9.43□□□□□ -0.9
PHGDH-221ENST00000641573 LOC389332A0A1B0GUA5 103 aa9.43□□□□□ -0.9
PHGDH-221ENST00000641573 TNFRSF6BO95407 300 aa9.43□□□□□ -0.9
PHGDH-221ENST00000641573 CRYGDP07320 174 aa9.43□□□□□ -0.9
PHGDH-221ENST00000641573 FABP4P15090 132 aa9.43□□□□□ -0.9
PHGDH-221ENST00000641573 RNASEKQ6P5S7 137 aaKnown RBP9.43□□□□□ -0.9
PHGDH-221ENST00000641573 NRACQ8N912 160 aa9.43□□□□□ -0.9
PHGDH-221ENST00000641573 HIST1H2BLQ99880 126 aa9.43□□□□□ -0.9
PHGDH-221ENST00000641573 KRTAP17-1Q9BYP8 105 aa9.43□□□□□ -0.9
PHGDH-221ENST00000641573 MRPL16Q9NX20 251 aaKnown RBP9.43□□□□□ -0.9
PHGDH-221ENST00000641573 STAB2Q8WWQ8 2551 aa9.42□□□□□ -0.9
PHGDH-221ENST00000641573 A8MWV9 139 aa9.42□□□□□ -0.9
PHGDH-221ENST00000641573 F5H697 171 aa9.42□□□□□ -0.9
PHGDH-221ENST00000641573 FAM74A4Q5TZK3 123 aa9.42□□□□□ -0.9
PHGDH-221ENST00000641573 PRSS3P2Q8NHM4 247 aa9.42□□□□□ -0.9
PHGDH-221ENST00000641573 TMEM18Q96B42 140 aa9.42□□□□□ -0.9
PHGDH-221ENST00000641573 CHCHD1Q96BP2 118 aaKnown RBP9.42□□□□□ -0.9
PHGDH-221ENST00000641573 MAP1LC3AQ9H492 121 aa9.42□□□□□ -0.9
PHGDH-221ENST00000641573 TRGV1A0A0A0MS02 117 aa9.41□□□□□ -0.9
PHGDH-221ENST00000641573 PLAC8L1A1L4L8 177 aa9.41□□□□□ -0.9
PHGDH-221ENST00000641573 LINC00614P0C842 121 aa9.41□□□□□ -0.9
PHGDH-221ENST00000641573 IFI27P40305 119 aaPredicted RBP9.41□□□□□ -0.9
PHGDH-221ENST00000641573 DAZ2Q13117 558 aaKnown RBP9.41□□□□□ -0.9
PHGDH-221ENST00000641573 ZNF56Q15929 161 aa9.41□□□□□ -0.9
PHGDH-221ENST00000641573 CASC10Q5T4H9 136 aa9.41□□□□□ -0.9
PHGDH-221ENST00000641573 SUMO4Q6EEV6 95 aa9.41□□□□□ -0.9
PHGDH-221ENST00000641573 FA2HQ7L5A8 372 aa9.41□□□□□ -0.9
PHGDH-221ENST00000641573 RASL10AQ92737 203 aa9.41□□□□□ -0.9
PHGDH-221ENST00000641573 NDUFAF3Q9BU61 184 aa9.41□□□□□ -0.9
PHGDH-221ENST00000641573 SMIM9A6NGZ8 99 aa9.4□□□□□ -0.9
PHGDH-221ENST00000641573 RS1O15537 224 aa9.4□□□□□ -0.9
PHGDH-221ENST00000641573 HSBP1O75506 76 aa9.4□□□□□ -0.9
PHGDH-221ENST00000641573 PMCHP20382 165 aa9.4□□□□□ -0.9
PHGDH-221ENST00000641573 DEFB135Q30KP9 77 aa9.4□□□□□ -0.9
PHGDH-221ENST00000641573 CFAP126Q5VTH2 177 aa9.4□□□□□ -0.9
PHGDH-221ENST00000641573 OR10D4PQ8NGN7 298 aa9.4□□□□□ -0.9
PHGDH-221ENST00000641573 MUC7Q8TAX7 377 aa9.4□□□□□ -0.9
PHGDH-221ENST00000641573 NOP10Q9NPE3 64 aaKnown RBP9.4□□□□□ -0.9
PHGDH-221ENST00000641573 X6R8D5 127 aa9.4□□□□□ -0.9
PHGDH-221ENST00000641573 LCE6AA0A183 80 aa9.39□□□□□ -0.91
PHGDH-221ENST00000641573 PRSS47A8MTI9 375 aa9.39□□□□□ -0.91
PHGDH-221ENST00000641573 A8MZ25 164 aa9.39□□□□□ -0.91
PHGDH-221ENST00000641573 PPP1R17O96001 155 aa9.39□□□□□ -0.91
PHGDH-221ENST00000641573 AMTP48728 403 aa9.39□□□□□ -0.91
PHGDH-221ENST00000641573 LGALS9BQ3B8N2 356 aa9.39□□□□□ -0.91
PHGDH-221ENST00000641573 UFSP1Q6NVU6 142 aa9.39□□□□□ -0.91
PHGDH-221ENST00000641573 Q6ZTI0 123 aa9.39□□□□□ -0.91
PHGDH-221ENST00000641573 FAM19A2Q8N3H0 131 aa9.39□□□□□ -0.91
PHGDH-221ENST00000641573 RPL39LQ96EH5 51 aaKnown RBP9.39□□□□□ -0.91
PHGDH-221ENST00000641573 PACRGQ96M98 296 aaPredicted RBP9.39□□□□□ -0.91
PHGDH-221ENST00000641573 OVOL2Q9BRP0 275 aa9.39□□□□□ -0.91
PHGDH-221ENST00000641573 IGHV3-73A0A0B4J1V6 119 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms