RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 SPG11Q96JI7 2443 aa10.3□□□□□ -0.76
PAX6-280ENST00000640872 IGHV4OR15-8A0A075B7B6 117 aa10.3□□□□□ -0.76
PAX6-280ENST00000640872 A0A087WW49 117 aa10.3□□□□□ -0.76
PAX6-280ENST00000640872 IGHV3-30P01768 117 aa10.3□□□□□ -0.76
PAX6-280ENST00000640872 MT-ATP8P03928 68 aa10.3□□□□□ -0.76
PAX6-280ENST00000640872 SPINK8P0C7L1 97 aa10.3□□□□□ -0.76
PAX6-280ENST00000640872 IGHV3-30-5P0DP03 117 aa10.3□□□□□ -0.76
PAX6-280ENST00000640872 TSPEAR-AS2P59090 65 aa10.3□□□□□ -0.76
PAX6-280ENST00000640872 UNQ9165/PRO28630Q6UXU0 137 aa10.3□□□□□ -0.76
PAX6-280ENST00000640872 Q6ZS46 218 aa10.3□□□□□ -0.76
PAX6-280ENST00000640872 MYO18BQ8IUG5 2567 aa10.3□□□□□ -0.76
PAX6-280ENST00000640872 USP9XQ93008 2570 aaPredicted RBP10.3□□□□□ -0.76
PAX6-280ENST00000640872 RNASE4P34096 147 aaKnown RBP10.3□□□□□ -0.76
PAX6-280ENST00000640872 EMP1P54849 157 aa10.3□□□□□ -0.76
PAX6-280ENST00000640872 XGP55808 180 aa10.3□□□□□ -0.76
PAX6-280ENST00000640872 PMVKQ15126 192 aa10.3□□□□□ -0.76
PAX6-280ENST00000640872 Q6ZUT4 128 aa10.3□□□□□ -0.76
PAX6-280ENST00000640872 FAM223BA6NKX1 122 aa10.29□□□□□ -0.76
PAX6-280ENST00000640872 CFC1BP0CG36 223 aa10.29□□□□□ -0.76
PAX6-280ENST00000640872 CFC1P0CG37 223 aa10.29□□□□□ -0.76
PAX6-280ENST00000640872 ARL3P36405 182 aa10.29□□□□□ -0.76
PAX6-280ENST00000640872 POLR2KP53803 58 aaKnown RBP10.29□□□□□ -0.76
PAX6-280ENST00000640872 FAM223AQ8IWN6 122 aa10.29□□□□□ -0.76
PAX6-280ENST00000640872 GEMIN7Q9H840 131 aaKnown RBP10.29□□□□□ -0.76
PAX6-280ENST00000640872 TRBV20-1A0A075B6N2 111 aa10.29□□□□□ -0.76
PAX6-280ENST00000640872 TRAV41A0A0B4J266 112 aa10.29□□□□□ -0.76
PAX6-280ENST00000640872 SLC25A29Q8N8R3 303 aa10.29□□□□□ -0.76
PAX6-280ENST00000640872 TRAV26-1A0A087WT03 109 aa10.28□□□□□ -0.76
PAX6-280ENST00000640872 C10orf126Q8N4M7 172 aa10.28□□□□□ -0.76
PAX6-280ENST00000640872 TMEM141Q96I45 108 aa10.28□□□□□ -0.76
PAX6-280ENST00000640872 AMELXQ99217 191 aa10.28□□□□□ -0.76
PAX6-280ENST00000640872 MUC4Q99102 2169 aa10.28□□□□□ -0.76
PAX6-280ENST00000640872 TRBV7-9A0A0J9YWB2 115 aa10.28□□□□□ -0.76
PAX6-280ENST00000640872 F6UB75 175 aa10.28□□□□□ -0.76
PAX6-280ENST00000640872 TRBV12-3P01733 135 aa10.28□□□□□ -0.76
PAX6-280ENST00000640872 RPL39P62891 51 aaKnown RBP10.28□□□□□ -0.76
PAX6-280ENST00000640872 TIMM17AQ99595 171 aa10.28□□□□□ -0.76
PAX6-280ENST00000640872 NDUFA4O00483 81 aa10.27□□□□□ -0.77
PAX6-280ENST00000640872 WFDC12Q8WWY7 111 aa10.27□□□□□ -0.77
PAX6-280ENST00000640872 LINC00527Q9UJ94 153 aa10.27□□□□□ -0.77
PAX6-280ENST00000640872 NPFFO15130 113 aa10.26□□□□□ -0.77
PAX6-280ENST00000640872 CRIP2P52943 208 aaPredicted RBP10.26□□□□□ -0.77
PAX6-280ENST00000640872 SUMO4Q6EEV6 95 aa10.26□□□□□ -0.77
PAX6-280ENST00000640872 ZNRF2Q8NHG8 242 aa10.26□□□□□ -0.77
PAX6-280ENST00000640872 VCX2Q9H322 139 aa10.26□□□□□ -0.77
PAX6-280ENST00000640872 A8MWV9 139 aa10.26□□□□□ -0.77
PAX6-280ENST00000640872 ZNF876PQ49A33 203 aa10.26□□□□□ -0.77
PAX6-280ENST00000640872 TMEM219Q86XT9 240 aa10.26□□□□□ -0.77
PAX6-280ENST00000640872 VCYO14598 125 aa10.25□□□□□ -0.77
PAX6-280ENST00000640872 TMEM170BQ5T4T1 132 aa10.25□□□□□ -0.77
PAX6-280ENST00000640872 ANKRD29Q8N6D5 301 aa10.25□□□□□ -0.77
PAX6-280ENST00000640872 DEFB104AQ8WTQ1 72 aa10.25□□□□□ -0.77
PAX6-280ENST00000640872 JPT2Q9H910 190 aa10.25□□□□□ -0.77
PAX6-280ENST00000640872 PRO1854Q9UHT4 67 aa10.25□□□□□ -0.77
PAX6-280ENST00000640872 MOB4Q9Y3A3 225 aa10.25□□□□□ -0.77
PAX6-280ENST00000640872 KIR2DL4Q99706 377 aa10.24□□□□□ -0.77
PAX6-280ENST00000640872 KLLNB2CW77 178 aa10.24□□□□□ -0.77
PAX6-280ENST00000640872 J3QQQ9 107 aa10.24□□□□□ -0.77
PAX6-280ENST00000640872 ZNF688P0C7X2 276 aa10.24□□□□□ -0.77
PAX6-280ENST00000640872 Q5PR19 223 aa10.24□□□□□ -0.77
PAX6-280ENST00000640872 TRBV27A0A0K0K1C4 114 aa10.23□□□□□ -0.77
PAX6-280ENST00000640872 SDHAF1A6NFY7 115 aa10.23□□□□□ -0.77
PAX6-280ENST00000640872 C19orf84I3L1E1 186 aa10.23□□□□□ -0.77
PAX6-280ENST00000640872 EIF4EBP3O60516 100 aaPredicted RBP10.23□□□□□ -0.77
PAX6-280ENST00000640872 TGFAP01135 160 aa10.23□□□□□ -0.77
PAX6-280ENST00000640872 PRORYQ9H606 182 aa10.23□□□□□ -0.77
PAX6-280ENST00000640872 A0A087WWL8 130 aa10.22□□□□□ -0.77
PAX6-280ENST00000640872 TRBV6-5A0A0K0K1A5 114 aa10.22□□□□□ -0.77
PAX6-280ENST00000640872 LMO4P61968 165 aa10.22□□□□□ -0.77
PAX6-280ENST00000640872 RPL11P62913 178 aaKnown RBP10.22□□□□□ -0.77
PAX6-280ENST00000640872 M0QXV9 152 aa10.22□□□□□ -0.77
PAX6-280ENST00000640872 LGALS9O00182 355 aa10.22□□□□□ -0.77
PAX6-280ENST00000640872 SCGB1C2P0DMR2 95 aa10.22□□□□□ -0.77
PAX6-280ENST00000640872 LGALS3P17931 250 aaKnown RBP10.22□□□□□ -0.77
PAX6-280ENST00000640872 GNLYP22749 145 aa10.21□□□□□ -0.77
PAX6-280ENST00000640872 FAM159AQ6UWV7 190 aa10.21□□□□□ -0.77
PAX6-280ENST00000640872 ERG28Q9UKR5 140 aa10.21□□□□□ -0.77
PAX6-280ENST00000640872 IGKV3-7A0A075B6H7 116 aa10.21□□□□□ -0.78
PAX6-280ENST00000640872 A4D1N5 150 aa10.21□□□□□ -0.78
PAX6-280ENST00000640872 IGHV3-33P01772 117 aa10.21□□□□□ -0.78
PAX6-280ENST00000640872 TMEM263Q8WUH6 116 aaKnown RBP10.21□□□□□ -0.78
PAX6-280ENST00000640872 TMEM223A0PJW6 202 aa10.2□□□□□ -0.78
PAX6-280ENST00000640872 F5H697 171 aa10.2□□□□□ -0.78
PAX6-280ENST00000640872 SLC25A20O43772 301 aa10.2□□□□□ -0.78
PAX6-280ENST00000640872 RHPN1-AS1Q9BWJ2 59 aa10.2□□□□□ -0.78
PAX6-280ENST00000640872 UBTD1Q9HAC8 227 aa10.2□□□□□ -0.78
PAX6-280ENST00000640872 TMEM262E9PQX1 116 aa10.19□□□□□ -0.78
PAX6-280ENST00000640872 LEPROTO15243 131 aa10.19□□□□□ -0.78
PAX6-280ENST00000640872 BRI3O95415 125 aa10.19□□□□□ -0.78
PAX6-280ENST00000640872 IGHV1-69P01742 117 aa10.19□□□□□ -0.78
PAX6-280ENST00000640872 USP24Q9UPU5 2620 aa10.19□□□□□ -0.78
PAX6-280ENST00000640872 A0A0B4J2C4 111 aa10.19□□□□□ -0.78
PAX6-280ENST00000640872 IGHV3-11P01762 117 aa10.19□□□□□ -0.78
PAX6-280ENST00000640872 NSUN5P1Q3KNT7 163 aa10.19□□□□□ -0.78
PAX6-280ENST00000640872 RAX2Q96IS3 184 aa10.19□□□□□ -0.78
PAX6-280ENST00000640872 BPESC1Q9GZL8 116 aa10.19□□□□□ -0.78
PAX6-280ENST00000640872 RNF183Q96D59 192 aa10.18□□□□□ -0.78
PAX6-280ENST00000640872 USMG5Q96IX5 58 aa10.18□□□□□ -0.78
PAX6-280ENST00000640872 OPRPNQ99935 248 aaPredicted RBP10.18□□□□□ -0.78
PAX6-280ENST00000640872 POLQO75417 2590 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms