RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 LINC01549A6NIU2 74 aa12.4□□□□□ -0.42
HNRNPU-228ENST00000640306 HOXA3O43365 443 aaPredicted RBP12.4□□□□□ -0.42
HNRNPU-228ENST00000640306 ZNF688P0C7X2 276 aa12.4□□□□□ -0.42
HNRNPU-228ENST00000640306 GAGE13Q4V321 117 aa12.4□□□□□ -0.42
HNRNPU-228ENST00000640306 SUMO4Q6EEV6 95 aa12.4□□□□□ -0.42
HNRNPU-228ENST00000640306 MORN3Q6PF18 240 aaPredicted RBP12.4□□□□□ -0.42
HNRNPU-228ENST00000640306 LOC107984156A0A0G2JMH3 177 aa12.39□□□□□ -0.43
HNRNPU-228ENST00000640306 ARL17AQ8IVW1 177 aa12.39□□□□□ -0.43
HNRNPU-228ENST00000640306 FAM208BQ5VWN6 2430 aa12.39□□□□□ -0.43
HNRNPU-228ENST00000640306 DOPEY1Q5JWR5 2465 aa12.39□□□□□ -0.43
HNRNPU-228ENST00000640306 TGFAP01135 160 aa12.39□□□□□ -0.43
HNRNPU-228ENST00000640306 OPRPNQ99935 248 aaPredicted RBP12.39□□□□□ -0.43
HNRNPU-228ENST00000640306 DAZ1Q9NQZ3 744 aaKnown RBP12.39□□□□□ -0.43
HNRNPU-228ENST00000640306 IGHG2P01859 326 aa12.38□□□□□ -0.43
HNRNPU-228ENST00000640306 LINC00315P59091 139 aa12.38□□□□□ -0.43
HNRNPU-228ENST00000640306 TMEM170BQ5T4T1 132 aa12.38□□□□□ -0.43
HNRNPU-228ENST00000640306 FAM19A4Q96LR4 140 aa12.38□□□□□ -0.43
HNRNPU-228ENST00000640306 F8W1H4 67 aa12.38□□□□□ -0.43
HNRNPU-228ENST00000640306 SPAG8Q99932 426 aaPredicted RBP12.38□□□□□ -0.43
HNRNPU-228ENST00000640306 A0A1B0GWB2 263 aa12.38□□□□□ -0.43
HNRNPU-228ENST00000640306 AZU1P20160 251 aa12.38□□□□□ -0.43
HNRNPU-228ENST00000640306 ZFP2Q6ZN57 461 aa12.38□□□□□ -0.43
HNRNPU-228ENST00000640306 USMG5Q96IX5 58 aa12.38□□□□□ -0.43
HNRNPU-228ENST00000640306 KIF25-AS1Q9Y6Z4 181 aa12.38□□□□□ -0.43
HNRNPU-228ENST00000640306 IGHV4-30-2A0A087WSY4 118 aa12.37□□□□□ -0.43
HNRNPU-228ENST00000640306 SDHAF1A6NFY7 115 aa12.37□□□□□ -0.43
HNRNPU-228ENST00000640306 SAMD13Q5VXD3 122 aa12.37□□□□□ -0.43
HNRNPU-228ENST00000640306 MDFICQ9P1T7 246 aa12.37□□□□□ -0.43
HNRNPU-228ENST00000640306 IGLV4-69A0A075B6H9 119 aa12.36□□□□□ -0.43
HNRNPU-228ENST00000640306 PIMREGQ9BSJ6 248 aa12.36□□□□□ -0.43
HNRNPU-228ENST00000640306 LRRK2Q5S007 2527 aa12.36□□□□□ -0.43
HNRNPU-228ENST00000640306 IGHV3-64A0A075B6Q5 118 aa12.36□□□□□ -0.43
HNRNPU-228ENST00000640306 AVPP01185 164 aa12.36□□□□□ -0.43
HNRNPU-228ENST00000640306 CRIP2P52943 208 aaPredicted RBP12.36□□□□□ -0.43
HNRNPU-228ENST00000640306 TSPEAR-AS2P59090 65 aa12.36□□□□□ -0.43
HNRNPU-228ENST00000640306 DUX5Q96PT3 197 aa12.35□□□□□ -0.43
HNRNPU-228ENST00000640306 A6NDX4 124 aa12.35□□□□□ -0.43
HNRNPU-228ENST00000640306 HTN1P15515 57 aa12.35□□□□□ -0.43
HNRNPU-228ENST00000640306 PSMB2P49721 201 aa12.35□□□□□ -0.43
HNRNPU-228ENST00000640306 ZNF56Q15929 161 aa12.35□□□□□ -0.43
HNRNPU-228ENST00000640306 CLEC2AQ6UVW9 174 aa12.35□□□□□ -0.43
HNRNPU-228ENST00000640306 ZNF418Q8TF45 676 aaPredicted RBP12.35□□□□□ -0.43
HNRNPU-228ENST00000640306 KIR2DL4Q99706 377 aa12.35□□□□□ -0.43
HNRNPU-228ENST00000640306 COX6B1P14854 86 aa12.34□□□□□ -0.43
HNRNPU-228ENST00000640306 GAGE12HA6NDE8 117 aa12.34□□□□□ -0.43
HNRNPU-228ENST00000640306 ATP5J2P56134 94 aa12.34□□□□□ -0.43
HNRNPU-228ENST00000640306 ATP6V0BQ99437 205 aa12.34□□□□□ -0.43
HNRNPU-228ENST00000640306 CCL19Q99731 98 aa12.34□□□□□ -0.43
HNRNPU-228ENST00000640306 PRO0461Q9UI25 63 aa12.34□□□□□ -0.43
HNRNPU-228ENST00000640306 IGIPA6NJ69 53 aa12.34□□□□□ -0.43
HNRNPU-228ENST00000640306 KLLNB2CW77 178 aa12.34□□□□□ -0.43
HNRNPU-228ENST00000640306 DCANP1Q8TF63 244 aa12.34□□□□□ -0.43
HNRNPU-228ENST00000640306 POLR2KP53803 58 aaKnown RBP12.33□□□□□ -0.44
HNRNPU-228ENST00000640306 SPINK13Q1W4C9 94 aa12.33□□□□□ -0.44
HNRNPU-228ENST00000640306 ZNRF2Q8NHG8 242 aa12.33□□□□□ -0.44
HNRNPU-228ENST00000640306 NRGNQ92686 78 aa12.33□□□□□ -0.44
HNRNPU-228ENST00000640306 PTH2Q96A98 100 aa12.33□□□□□ -0.44
HNRNPU-228ENST00000640306 PMVKQ15126 192 aa12.33□□□□□ -0.44
HNRNPU-228ENST00000640306 ZNF843Q8N446 348 aa12.33□□□□□ -0.44
HNRNPU-228ENST00000640306 TSPAN13O95857 204 aa12.32□□□□□ -0.44
HNRNPU-228ENST00000640306 MED14OSP0DP75 135 aa12.32□□□□□ -0.44
HNRNPU-228ENST00000640306 APRG1Q8IVJ8 170 aa12.32□□□□□ -0.44
HNRNPU-228ENST00000640306 SIGMAR1Q99720 223 aa12.32□□□□□ -0.44
HNRNPU-228ENST00000640306 VCYO14598 125 aa12.32□□□□□ -0.44
HNRNPU-228ENST00000640306 PPP1R17O96001 155 aa12.31□□□□□ -0.44
HNRNPU-228ENST00000640306 ID1P41134 155 aa12.31□□□□□ -0.44
HNRNPU-228ENST00000640306 C10orf105Q8TEF2 133 aa12.31□□□□□ -0.44
HNRNPU-228ENST00000640306 A0A0J9YY99 117 aa12.31□□□□□ -0.44
HNRNPU-228ENST00000640306 Q8N1Y9 231 aa12.31□□□□□ -0.44
HNRNPU-228ENST00000640306 IGHV3-73A0A0B4J1V6 119 aa12.31□□□□□ -0.44
HNRNPU-228ENST00000640306 J3QR89 54 aa12.31□□□□□ -0.44
HNRNPU-228ENST00000640306 IGLV1-40P01703 118 aa12.31□□□□□ -0.44
HNRNPU-228ENST00000640306 IGHV4-59P01825 116 aa12.31□□□□□ -0.44
HNRNPU-228ENST00000640306 HERVK_113P61574 105 aa12.31□□□□□ -0.44
HNRNPU-228ENST00000640306 MAPK1IP1LQ8NDC0 245 aa12.31□□□□□ -0.44
HNRNPU-228ENST00000640306 IGHV4OR15-8A0A075B7B6 117 aa12.3□□□□□ -0.44
HNRNPU-228ENST00000640306 A0A087WW49 117 aa12.3□□□□□ -0.44
HNRNPU-228ENST00000640306 TMEM238LA0A1B0GVL6 79 aa12.3□□□□□ -0.44
HNRNPU-228ENST00000640306 A6NJY4 79 aa12.3□□□□□ -0.44
HNRNPU-228ENST00000640306 NXPH4O95158 308 aa12.3□□□□□ -0.44
HNRNPU-228ENST00000640306 SMCPP49901 116 aaPredicted RBP12.3□□□□□ -0.44
HNRNPU-228ENST00000640306 PRM2P04554 102 aa12.29□□□□□ -0.44
HNRNPU-228ENST00000640306 MSMBP08118 114 aa12.29□□□□□ -0.44
HNRNPU-228ENST00000640306 LINC01619G3V211 115 aa12.29□□□□□ -0.44
HNRNPU-228ENST00000640306 H3BUA1 57 aa12.28□□□□□ -0.44
HNRNPU-228ENST00000640306 H7C2G1 150 aa12.28□□□□□ -0.44
HNRNPU-228ENST00000640306 NDUFS8O00217 210 aa12.28□□□□□ -0.44
HNRNPU-228ENST00000640306 UBE2D1P51668 147 aa12.28□□□□□ -0.44
HNRNPU-228ENST00000640306 SYNJ2BPP57105 145 aa12.28□□□□□ -0.44
HNRNPU-228ENST00000640306 DLX4Q92988 240 aaPredicted RBP12.28□□□□□ -0.44
HNRNPU-228ENST00000640306 IGHV3-16A0A0C4DH30 117 aa12.28□□□□□ -0.44
HNRNPU-228ENST00000640306 ZNF580Q9UK33 172 aa12.28□□□□□ -0.44
HNRNPU-228ENST00000640306 MXRA5Q9NR99 2828 aa12.28□□□□□ -0.44
HNRNPU-228ENST00000640306 NDUFA11Q86Y39 141 aa12.27□□□□□ -0.45
HNRNPU-228ENST00000640306 POM121L12Q8N7R1 296 aa12.27□□□□□ -0.45
HNRNPU-228ENST00000640306 NOTCH3Q9UM47 2321 aa12.27□□□□□ -0.45
HNRNPU-228ENST00000640306 MYO9AB2RTY4 2548 aa12.27□□□□□ -0.45
HNRNPU-228ENST00000640306 RAX2Q96IS3 184 aa12.27□□□□□ -0.45
HNRNPU-228ENST00000640306 J3QQQ9 107 aa12.26□□□□□ -0.45
HNRNPU-228ENST00000640306 P0DMU3 169 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms