RNA–Protein interactions for RNA: ENST00000619587.1

LHX3-203, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,698 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-203ENST00000619587 SPTA1P02549 2419 aa13.01□□□□□ -0.33
LHX3-203ENST00000619587 JPT2Q9H910 190 aa13.01□□□□□ -0.33
LHX3-203ENST00000619587 RNASE4P34096 147 aaKnown RBP13□□□□□ -0.33
LHX3-203ENST00000619587 PRR30Q53SZ7 412 aaPredicted RBP13□□□□□ -0.33
LHX3-203ENST00000619587 ITLN2Q8WWU7 325 aaPredicted RBP13□□□□□ -0.33
LHX3-203ENST00000619587 TRAV21A0A0B4J279 112 aa13□□□□□ -0.33
LHX3-203ENST00000619587 F6UB75 175 aa12.99□□□□□ -0.33
LHX3-203ENST00000619587 J3QQQ9 107 aa12.99□□□□□ -0.33
LHX3-203ENST00000619587 RNASE3P12724 160 aaKnown RBP12.99□□□□□ -0.33
LHX3-203ENST00000619587 GRNP28799 593 aaKnown RBP12.99□□□□□ -0.33
LHX3-203ENST00000619587 PAPPA-AS1Q5QFB9 102 aa12.99□□□□□ -0.33
LHX3-203ENST00000619587 U3KQE9 123 aa12.99□□□□□ -0.33
LHX3-203ENST00000619587 IGHV3-33P01772 117 aa12.99□□□□□ -0.33
LHX3-203ENST00000619587 TRAV8-4A0A0B4J246 113 aa12.98□□□□□ -0.33
LHX3-203ENST00000619587 LINC00315P59091 139 aa12.98□□□□□ -0.33
LHX3-203ENST00000619587 C15orf53Q8NAA6 179 aa12.98□□□□□ -0.33
LHX3-203ENST00000619587 ODF3Q96PU9 254 aa12.98□□□□□ -0.33
LHX3-203ENST00000619587 AKAP6Q13023 2319 aa12.98□□□□□ -0.33
LHX3-203ENST00000619587 EEF1AKMT3Q96AZ1 226 aa12.97□□□□□ -0.33
LHX3-203ENST00000619587 OPRPNQ99935 248 aaPredicted RBP12.97□□□□□ -0.33
LHX3-203ENST00000619587 CELSR1Q9NYQ6 3014 aa12.97□□□□□ -0.33
LHX3-203ENST00000619587 ZNF292O60281 2723 aa12.97□□□□□ -0.33
LHX3-203ENST00000619587 IGHV3-64A0A075B6Q5 118 aa12.97□□□□□ -0.33
LHX3-203ENST00000619587 TRAV2A0A0B4J234 112 aa12.97□□□□□ -0.33
LHX3-203ENST00000619587 IGHV1-69DA0A0B4J2H0 117 aa12.97□□□□□ -0.33
LHX3-203ENST00000619587 LGALS3P17931 250 aaKnown RBP12.97□□□□□ -0.33
LHX3-203ENST00000619587 Q8NA96 180 aa12.97□□□□□ -0.33
LHX3-203ENST00000619587 TMEM263Q8WUH6 116 aaKnown RBP12.97□□□□□ -0.33
LHX3-203ENST00000619587 TEX49A0A1B0GTD5 131 aa12.96□□□□□ -0.33
LHX3-203ENST00000619587 C9orf139Q6ZV77 190 aa12.96□□□□□ -0.33
LHX3-203ENST00000619587 LENEPQ9Y5L5 61 aa12.96□□□□□ -0.33
LHX3-203ENST00000619587 KIF25-AS1Q9Y6Z4 181 aa12.96□□□□□ -0.33
LHX3-203ENST00000619587 A0A087WWL8 130 aa12.96□□□□□ -0.33
LHX3-203ENST00000619587 OR10J6PQ8NGY7 276 aa12.96□□□□□ -0.33
LHX3-203ENST00000619587 LINC00477Q96M19 166 aa12.96□□□□□ -0.33
LHX3-203ENST00000619587 P0DMU3 169 aa12.96□□□□□ -0.34
LHX3-203ENST00000619587 FAM231AP0DMU4 169 aa12.96□□□□□ -0.34
LHX3-203ENST00000619587 FAM231CP0DMU5 169 aa12.96□□□□□ -0.34
LHX3-203ENST00000619587 POLR2KP53803 58 aaKnown RBP12.96□□□□□ -0.34
LHX3-203ENST00000619587 ATXN8Q156A1 80 aa12.96□□□□□ -0.34
LHX3-203ENST00000619587 LINC01620Q4KN68 170 aa12.96□□□□□ -0.34
LHX3-203ENST00000619587 SUMO4Q6EEV6 95 aa12.96□□□□□ -0.34
LHX3-203ENST00000619587 LINC00527Q9UJ94 153 aa12.96□□□□□ -0.34
LHX3-203ENST00000619587 IGKV3-7A0A075B6H7 116 aa12.95□□□□□ -0.34
LHX3-203ENST00000619587 IGHV4-39P01824 125 aa12.95□□□□□ -0.34
LHX3-203ENST00000619587 ZFP36P26651 326 aaKnown RBP12.95□□□□□ -0.34
LHX3-203ENST00000619587 ZNF876PQ49A33 203 aa12.95□□□□□ -0.34
LHX3-203ENST00000619587 BEX4Q9NWD9 120 aaPredicted RBP12.95□□□□□ -0.34
LHX3-203ENST00000619587 PTPRZ1P23471 2315 aaPredicted RBP12.95□□□□□ -0.34
LHX3-203ENST00000619587 TCF15Q12870 199 aa12.95□□□□□ -0.34
LHX3-203ENST00000619587 Q1RN00 199 aa12.95□□□□□ -0.34
LHX3-203ENST00000619587 MEIG1Q5JSS6 88 aa12.95□□□□□ -0.34
LHX3-203ENST00000619587 MUSTN1Q8IVN3 82 aa12.95□□□□□ -0.34
LHX3-203ENST00000619587 PPP1R17O96001 155 aa12.94□□□□□ -0.34
LHX3-203ENST00000619587 UNQ9165/PRO28630Q6UXU0 137 aa12.94□□□□□ -0.34
LHX3-203ENST00000619587 SPANXA1Q9NS26 97 aa12.94□□□□□ -0.34
LHX3-203ENST00000619587 OOSP1A8MZH6 123 aa12.94□□□□□ -0.34
LHX3-203ENST00000619587 BRI3O95415 125 aa12.94□□□□□ -0.34
LHX3-203ENST00000619587 RPL13AP40429 203 aaKnown RBP12.94□□□□□ -0.34
LHX3-203ENST00000619587 C1orf122Q6ZSJ8 110 aa12.94□□□□□ -0.34
LHX3-203ENST00000619587 MINOS1Q5TGZ0 78 aa12.93□□□□□ -0.34
LHX3-203ENST00000619587 TMEM141Q96I45 108 aa12.93□□□□□ -0.34
LHX3-203ENST00000619587 ZNF580Q9UK33 172 aa12.93□□□□□ -0.34
LHX3-203ENST00000619587 TNFRSF18Q9Y5U5 241 aa12.93□□□□□ -0.34
LHX3-203ENST00000619587 MINOS1-NBL1R4GNA1 71 aa12.93□□□□□ -0.34
LHX3-203ENST00000619587 TRBV7-1A0A0A6YYK4 115 aa12.93□□□□□ -0.34
LHX3-203ENST00000619587 SDHAF1A6NFY7 115 aa12.93□□□□□ -0.34
LHX3-203ENST00000619587 F5H697 171 aa12.93□□□□□ -0.34
LHX3-203ENST00000619587 POM121L12Q8N7R1 296 aa12.93□□□□□ -0.34
LHX3-203ENST00000619587 TIMM17AQ99595 171 aa12.93□□□□□ -0.34
LHX3-203ENST00000619587 IGHV4OR15-8A0A075B7B6 117 aa12.92□□□□□ -0.34
LHX3-203ENST00000619587 A0A087WW49 117 aa12.92□□□□□ -0.34
LHX3-203ENST00000619587 A0A0B4J2C4 111 aa12.92□□□□□ -0.34
LHX3-203ENST00000619587 H3BMM0 161 aa12.92□□□□□ -0.34
LHX3-203ENST00000619587 TRBV12-3P01733 135 aa12.92□□□□□ -0.34
LHX3-203ENST00000619587 KLK9Q2XQG4 91 aa12.92□□□□□ -0.34
LHX3-203ENST00000619587 UBE2WQ96B02 151 aa12.92□□□□□ -0.34
LHX3-203ENST00000619587 KLK9Q9UKQ9 250 aa12.92□□□□□ -0.34
LHX3-203ENST00000619587 ZNF256Q9Y2P7 627 aaPredicted RBP12.92□□□□□ -0.34
LHX3-203ENST00000619587 IGF2-ASQ6U949 168 aa12.92□□□□□ -0.34
LHX3-203ENST00000619587 TRBV10-2A0A0K0K1G8 114 aa12.91□□□□□ -0.34
LHX3-203ENST00000619587 MED14OSP0DP75 135 aa12.91□□□□□ -0.34
LHX3-203ENST00000619587 SPTAN1Q13813 2472 aaKnown RBP12.91□□□□□ -0.34
LHX3-203ENST00000619587 SOCS3O14543 225 aa12.91□□□□□ -0.34
LHX3-203ENST00000619587 VCYO14598 125 aa12.91□□□□□ -0.34
LHX3-203ENST00000619587 RPL11P62913 178 aaKnown RBP12.91□□□□□ -0.34
LHX3-203ENST00000619587 MDFICQ9P1T7 246 aa12.91□□□□□ -0.34
LHX3-203ENST00000619587 CEP295Q9C0D2 2601 aa12.9□□□□□ -0.34
LHX3-203ENST00000619587 LGALS9O00182 355 aa12.9□□□□□ -0.34
LHX3-203ENST00000619587 OVOL1O14753 267 aa12.9□□□□□ -0.34
LHX3-203ENST00000619587 PRRC2AP48634 2157 aaKnown RBP12.9□□□□□ -0.34
LHX3-203ENST00000619587 NXPH4O95158 308 aa12.9□□□□□ -0.34
LHX3-203ENST00000619587 FAM19A4Q96LR4 140 aa12.9□□□□□ -0.34
LHX3-203ENST00000619587 COL6A6A6NMZ7 2263 aa12.9□□□□□ -0.34
LHX3-203ENST00000619587 TMEM223A0PJW6 202 aa12.89□□□□□ -0.35
LHX3-203ENST00000619587 ADARB2-AS1A8MUL3 147 aa12.89□□□□□ -0.35
LHX3-203ENST00000619587 LEPROTO15243 131 aa12.89□□□□□ -0.35
LHX3-203ENST00000619587 FOXC1Q12948 553 aa12.89□□□□□ -0.35
LHX3-203ENST00000619587 FAM74A4Q5TZK3 123 aa12.89□□□□□ -0.35
LHX3-203ENST00000619587 LINC01600Q96MT4 127 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms