RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 PIPP12273 146 aaPredicted RBP0.58□□□□□ -2.32
TARDBP-220ENST00000618606 RBM3P98179 157 aaKnown RBP0.58□□□□□ -2.32
TARDBP-220ENST00000618606 RPL7L1Q6DKI1 246 aaKnown RBP0.58□□□□□ -2.32
TARDBP-220ENST00000618606 CYP2G1PQ6ZSU1 146 aa0.58□□□□□ -2.32
TARDBP-220ENST00000618606 C2orf88Q9BSF0 95 aa0.58□□□□□ -2.32
TARDBP-220ENST00000618606 SNRNP25Q9BV90 132 aaKnown RBP0.58□□□□□ -2.32
TARDBP-220ENST00000618606 SCN3BQ9NY72 215 aa0.58□□□□□ -2.32
TARDBP-220ENST00000618606 MYH6P13533 1939 aa0.58□□□□□ -2.32
TARDBP-220ENST00000618606 MYH13Q9UKX3 1938 aa0.58□□□□□ -2.32
TARDBP-220ENST00000618606 MUC22E2RYF6 1773 aaPredicted RBP0.57□□□□□ -2.32
TARDBP-220ENST00000618606 MUC5BQ9HC84 5762 aaPredicted RBP0.57□□□□□ -2.32
TARDBP-220ENST00000618606 FOCADQ5VW36 1801 aa0.57□□□□□ -2.32
TARDBP-220ENST00000618606 NCOA3Q9Y6Q9 1424 aa0.57□□□□□ -2.32
TARDBP-220ENST00000618606 A0A087WTM6 91 aa0.57□□□□□ -2.32
TARDBP-220ENST00000618606 TEX49A0A1B0GTD5 131 aa0.57□□□□□ -2.32
TARDBP-220ENST00000618606 K7EIL1 84 aa0.57□□□□□ -2.32
TARDBP-220ENST00000618606 AKAIN1P0CW23 69 aa0.57□□□□□ -2.32
TARDBP-220ENST00000618606 CBLN1P23435 193 aa0.57□□□□□ -2.32
TARDBP-220ENST00000618606 SPINT3P49223 89 aa0.57□□□□□ -2.32
TARDBP-220ENST00000618606 INSL4Q14641 139 aa0.57□□□□□ -2.32
TARDBP-220ENST00000618606 NDUFA11Q86Y39 141 aa0.57□□□□□ -2.32
TARDBP-220ENST00000618606 RERGLQ9H628 205 aa0.57□□□□□ -2.32
TARDBP-220ENST00000618606 RPRMQ9NS64 109 aa0.57□□□□□ -2.32
TARDBP-220ENST00000618606 ROS1P08922 2347 aa0.56□□□□□ -2.32
TARDBP-220ENST00000618606 NOTCH1P46531 2555 aa0.56□□□□□ -2.32
TARDBP-220ENST00000618606 PLXNA2O75051 1894 aa0.56□□□□□ -2.32
TARDBP-220ENST00000618606 BLMP54132 1417 aaPredicted RBP0.56□□□□□ -2.32
TARDBP-220ENST00000618606 DLEC1Q9Y238 1755 aa0.56□□□□□ -2.32
TARDBP-220ENST00000618606 CLPSL1A2RUU4 121 aa0.56□□□□□ -2.32
TARDBP-220ENST00000618606 MIF4GDA9UHW6 222 aaKnown RBP0.56□□□□□ -2.32
TARDBP-220ENST00000618606 MCRIP1C9JLW8 97 aa0.56□□□□□ -2.32
TARDBP-220ENST00000618606 SNAPC5O75971 98 aa0.56□□□□□ -2.32
TARDBP-220ENST00000618606 CCL3L1P16619 93 aa0.56□□□□□ -2.32
TARDBP-220ENST00000618606 PRB3Q04118 309 aaPredicted RBP0.56□□□□□ -2.32
TARDBP-220ENST00000618606 KLKP1Q107X0 134 aa0.56□□□□□ -2.32
TARDBP-220ENST00000618606 C10orf99Q6UWK7 81 aa0.56□□□□□ -2.32
TARDBP-220ENST00000618606 COX7B2Q8TF08 81 aa0.56□□□□□ -2.32
TARDBP-220ENST00000618606 PP6455Q8WZ26 134 aa0.56□□□□□ -2.32
TARDBP-220ENST00000618606 TMEM14BQ9NUH8 114 aa0.56□□□□□ -2.32
TARDBP-220ENST00000618606 SERP1Q9Y6X1 66 aa0.56□□□□□ -2.32
TARDBP-220ENST00000618606 LAMA4Q16363 1823 aa0.56□□□□□ -2.32
TARDBP-220ENST00000618606 SNRNP200O75643 2136 aaKnown RBP0.56□□□□□ -2.32
TARDBP-220ENST00000618606 CFTRP13569 1480 aa0.55□□□□□ -2.32
TARDBP-220ENST00000618606 ZGRF1Q86YA3 2104 aa0.55□□□□□ -2.32
TARDBP-220ENST00000618606 F6UZH7 168 aa0.55□□□□□ -2.32
TARDBP-220ENST00000618606 FGF7P21781 194 aa0.55□□□□□ -2.32
TARDBP-220ENST00000618606 S100A1P23297 94 aa0.55□□□□□ -2.32
TARDBP-220ENST00000618606 UBE2D1P51668 147 aa0.55□□□□□ -2.32
TARDBP-220ENST00000618606 BTG2P78543 158 aa0.55□□□□□ -2.32
TARDBP-220ENST00000618606 Q56UQ5 140 aa0.55□□□□□ -2.32
TARDBP-220ENST00000618606 Q6AWC8 147 aa0.55□□□□□ -2.32
TARDBP-220ENST00000618606 C4orf33Q8N1A6 199 aa0.55□□□□□ -2.32
TARDBP-220ENST00000618606 Q8N8P6 123 aa0.55□□□□□ -2.32
TARDBP-220ENST00000618606 DSCR8Q96T75 97 aa0.55□□□□□ -2.32
TARDBP-220ENST00000618606 NAA60Q9H7X0 242 aa0.55□□□□□ -2.32
TARDBP-220ENST00000618606 COA4Q9NYJ1 87 aa0.55□□□□□ -2.32
TARDBP-220ENST00000618606 BET1LQ9NYM9 111 aa0.55□□□□□ -2.32
TARDBP-220ENST00000618606 GNG8Q9UK08 70 aa0.55□□□□□ -2.32
TARDBP-220ENST00000618606 ZNF518AQ6AHZ1 1483 aa0.54□□□□□ -2.32
TARDBP-220ENST00000618606 A0A0D9SG42 100 aa0.54□□□□□ -2.32
TARDBP-220ENST00000618606 OOSP1A8MZH6 123 aa0.54□□□□□ -2.32
TARDBP-220ENST00000618606 HCG22E2RYF7 251 aa0.54□□□□□ -2.32
TARDBP-220ENST00000618606 IFNGP01579 166 aa0.54□□□□□ -2.32
TARDBP-220ENST00000618606 SSBP1Q04837 148 aaKnown RBP0.54□□□□□ -2.32
TARDBP-220ENST00000618606 CATR1Q13166 79 aa0.54□□□□□ -2.32
TARDBP-220ENST00000618606 C6orf52Q5T4I8 152 aa0.54□□□□□ -2.32
TARDBP-220ENST00000618606 COPS9Q8WXC6 57 aa0.54□□□□□ -2.32
TARDBP-220ENST00000618606 Q96NJ1 140 aa0.54□□□□□ -2.32
TARDBP-220ENST00000618606 LINC00312Q9Y6C7 94 aa0.54□□□□□ -2.32
TARDBP-220ENST00000618606 SPEF2Q9C093 1822 aa0.54□□□□□ -2.32
TARDBP-220ENST00000618606 CNTRLQ7Z7A1 2325 aa0.54□□□□□ -2.32
TARDBP-220ENST00000618606 DAPK1P53355 1430 aa0.54□□□□□ -2.32
TARDBP-220ENST00000618606 AKAP11Q9UKA4 1901 aa0.54□□□□□ -2.32
TARDBP-220ENST00000618606 NINQ8N4C6 2090 aa0.53□□□□□ -2.32
TARDBP-220ENST00000618606 RBBP6Q7Z6E9 1792 aaKnown RBP0.53□□□□□ -2.32
TARDBP-220ENST00000618606 AFDNP55196 1824 aaKnown RBP0.53□□□□□ -2.32
TARDBP-220ENST00000618606 RBAKDNA6NC62 111 aa0.53□□□□□ -2.32
TARDBP-220ENST00000618606 APOC4-APOC2K7ER74 178 aa0.53□□□□□ -2.32
TARDBP-220ENST00000618606 CORTO00230 105 aa0.53□□□□□ -2.32
TARDBP-220ENST00000618606 APOC2P02655 101 aa0.53□□□□□ -2.32
TARDBP-220ENST00000618606 ZNF137PP52743 207 aa0.53□□□□□ -2.32
TARDBP-220ENST00000618606 RPL37P61927 97 aaKnown RBP0.53□□□□□ -2.32
TARDBP-220ENST00000618606 MRPL54Q6P161 138 aaKnown RBP0.53□□□□□ -2.32
TARDBP-220ENST00000618606 V9GYV3 84 aa0.53□□□□□ -2.32
TARDBP-220ENST00000618606 NAIPQ13075 1403 aa0.53□□□□□ -2.32
TARDBP-220ENST00000618606 A0A096LNT2 108 aa0.52□□□□□ -2.33
TARDBP-220ENST00000618606 TRBV7-1A0A0A6YYK4 115 aa0.52□□□□□ -2.33
TARDBP-220ENST00000618606 TRBV10-3A0A0K0K1G6 114 aa0.52□□□□□ -2.33
TARDBP-220ENST00000618606 IFNA17P01571 189 aa0.52□□□□□ -2.33
TARDBP-220ENST00000618606 EDDM3BP56851 147 aa0.52□□□□□ -2.33
TARDBP-220ENST00000618606 CCL8P80075 99 aa0.52□□□□□ -2.33
TARDBP-220ENST00000618606 SPINK13Q1W4C9 94 aa0.52□□□□□ -2.33
TARDBP-220ENST00000618606 SPINK9Q5DT21 86 aa0.52□□□□□ -2.33
TARDBP-220ENST00000618606 C9orf153Q5TBE3 101 aa0.52□□□□□ -2.33
TARDBP-220ENST00000618606 TMEM203Q969S6 136 aa0.52□□□□□ -2.33
TARDBP-220ENST00000618606 CASKIN1Q8WXD9 1431 aa0.52□□□□□ -2.33
TARDBP-220ENST00000618606 A2ML1A8K2U0 1454 aa0.52□□□□□ -2.33
TARDBP-220ENST00000618606 BCL9LQ86UU0 1499 aa0.52□□□□□ -2.33
TARDBP-220ENST00000618606 IFT140Q96RY7 1462 aa0.52□□□□□ -2.33
TARDBP-220ENST00000618606 PEG3Q9GZU2 1588 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms