RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 ZNF491Q8N8L2 437 aa5.66□□□□□ -1.5
PDE6A-205ENST00000617647 ADAMTS20P59510 1910 aa5.66□□□□□ -1.5
PDE6A-205ENST00000617647 SDHAF1A6NFY7 115 aa5.66□□□□□ -1.5
PDE6A-205ENST00000617647 PRB1P04280 392 aa5.66□□□□□ -1.5
PDE6A-205ENST00000617647 SIRPDQ9H106 197 aa5.66□□□□□ -1.5
PDE6A-205ENST00000617647 Q9HAA7 133 aa5.66□□□□□ -1.5
PDE6A-205ENST00000617647 C14orf132Q9NPU4 83 aa5.66□□□□□ -1.5
PDE6A-205ENST00000617647 TET2Q6N021 2002 aaPredicted RBP5.66□□□□□ -1.5
PDE6A-205ENST00000617647 TIMM17BO60830 172 aa5.65□□□□□ -1.5
PDE6A-205ENST00000617647 IGHV1-2P23083 117 aa5.65□□□□□ -1.5
PDE6A-205ENST00000617647 PRORYQ9H606 182 aa5.65□□□□□ -1.5
PDE6A-205ENST00000617647 COL5A1P20908 1838 aaPredicted RBP5.65□□□□□ -1.5
PDE6A-205ENST00000617647 A0A0J9YXY3 114 aa5.65□□□□□ -1.5
PDE6A-205ENST00000617647 TIRAPP58753 221 aa5.65□□□□□ -1.5
PDE6A-205ENST00000617647 PRIMA1Q86XR5 153 aa5.65□□□□□ -1.5
PDE6A-205ENST00000617647 FAM223AQ8IWN6 122 aa5.65□□□□□ -1.5
PDE6A-205ENST00000617647 SERP1Q9Y6X1 66 aa5.65□□□□□ -1.5
PDE6A-205ENST00000617647 DNAH14Q0VDD8 3507 aa5.65□□□□□ -1.51
PDE6A-205ENST00000617647 UNC80Q8N2C7 3258 aa5.65□□□□□ -1.51
PDE6A-205ENST00000617647 IGHV1-69DA0A0B4J2H0 117 aa5.65□□□□□ -1.51
PDE6A-205ENST00000617647 A0A1W2PRX2 142 aa5.65□□□□□ -1.51
PDE6A-205ENST00000617647 PSMB8P28062 276 aa5.65□□□□□ -1.51
PDE6A-205ENST00000617647 TSPEAR-AS2P59090 65 aa5.65□□□□□ -1.51
PDE6A-205ENST00000617647 TMEM200BQ69YZ2 307 aa5.65□□□□□ -1.51
PDE6A-205ENST00000617647 Q6ZSV7 163 aa5.65□□□□□ -1.51
PDE6A-205ENST00000617647 MRPL55Q7Z7F7 128 aaKnown RBP5.65□□□□□ -1.51
PDE6A-205ENST00000617647 C9orf85Q96MD7 179 aa5.65□□□□□ -1.51
PDE6A-205ENST00000617647 OPRPNQ99935 248 aaPredicted RBP5.65□□□□□ -1.51
PDE6A-205ENST00000617647 NXPH4O95158 308 aa5.64□□□□□ -1.51
PDE6A-205ENST00000617647 IGKV1-17P01599 117 aa5.64□□□□□ -1.51
PDE6A-205ENST00000617647 CRPP02741 224 aa5.64□□□□□ -1.51
PDE6A-205ENST00000617647 PAX8Q06710 450 aa5.64□□□□□ -1.51
PDE6A-205ENST00000617647 POM121L12Q8N7R1 296 aa5.64□□□□□ -1.51
PDE6A-205ENST00000617647 NRACQ8N912 160 aa5.64□□□□□ -1.51
PDE6A-205ENST00000617647 RNF138Q8WVD3 245 aa5.64□□□□□ -1.51
PDE6A-205ENST00000617647 ZNF71Q9NQZ8 489 aaPredicted RBP5.64□□□□□ -1.51
PDE6A-205ENST00000617647 TMEM223A0PJW6 202 aa5.64□□□□□ -1.51
PDE6A-205ENST00000617647 CCL11P51671 97 aa5.64□□□□□ -1.51
PDE6A-205ENST00000617647 ECSCRQ19T08 205 aa5.64□□□□□ -1.51
PDE6A-205ENST00000617647 ZNF876PQ49A33 203 aa5.64□□□□□ -1.51
PDE6A-205ENST00000617647 RNASE13Q5GAN3 156 aaKnown RBP5.64□□□□□ -1.51
PDE6A-205ENST00000617647 MRPL14Q6P1L8 145 aaKnown RBP5.64□□□□□ -1.51
PDE6A-205ENST00000617647 LY6G5BQ8NDX9 201 aa5.64□□□□□ -1.51
PDE6A-205ENST00000617647 FANCD2OSQ96PS1 177 aa5.64□□□□□ -1.51
PDE6A-205ENST00000617647 PTPRBP23467 1997 aa5.64□□□□□ -1.51
PDE6A-205ENST00000617647 ZNF833PQ6ZTB9 187 aa5.64□□□□□ -1.51
PDE6A-205ENST00000617647 LRP4O75096 1905 aa5.64□□□□□ -1.51
PDE6A-205ENST00000617647 MKI67P46013 3256 aaKnown RBP5.64□□□□□ -1.51
PDE6A-205ENST00000617647 EPOPA6NHQ4 379 aa5.64□□□□□ -1.51
PDE6A-205ENST00000617647 UBL5Q9BZL1 73 aa5.64□□□□□ -1.51
PDE6A-205ENST00000617647 IGLV3-19P01714 112 aa5.63□□□□□ -1.51
PDE6A-205ENST00000617647 GATA4P43694 442 aa5.63□□□□□ -1.51
PDE6A-205ENST00000617647 ARHGAP32A7KAX9 2087 aa5.63□□□□□ -1.51
PDE6A-205ENST00000617647 CDH23Q9H251 3354 aa5.63□□□□□ -1.51
PDE6A-205ENST00000617647 WDR87Q6ZQQ6 2873 aa5.63□□□□□ -1.51
PDE6A-205ENST00000617647 HAMPP81172 84 aa5.63□□□□□ -1.51
PDE6A-205ENST00000617647 GFRALQ6UXV0 394 aa5.63□□□□□ -1.51
PDE6A-205ENST00000617647 RUSC1-AS1Q66K80 236 aa5.63□□□□□ -1.51
PDE6A-205ENST00000617647 LINC00311Q8N616 119 aa5.63□□□□□ -1.51
PDE6A-205ENST00000617647 SPTBN1Q01082 2364 aaKnown RBP5.63□□□□□ -1.51
PDE6A-205ENST00000617647 CHD7Q9P2D1 2997 aa5.62□□□□□ -1.51
PDE6A-205ENST00000617647 PRAC2D3DTV9 90 aa5.62□□□□□ -1.51
PDE6A-205ENST00000617647 FSTL3O95633 263 aa5.62□□□□□ -1.51
PDE6A-205ENST00000617647 ZFAND3Q9H8U3 227 aa5.62□□□□□ -1.51
PDE6A-205ENST00000617647 SNURFQ9Y675 71 aa5.62□□□□□ -1.51
PDE6A-205ENST00000617647 ATRXP46100 2492 aa5.62□□□□□ -1.51
PDE6A-205ENST00000617647 IGHV3-30-3P0DP02 117 aa5.62□□□□□ -1.51
PDE6A-205ENST00000617647 COX6B1P14854 86 aa5.62□□□□□ -1.51
PDE6A-205ENST00000617647 IL17DQ8TAD2 202 aa5.62□□□□□ -1.51
PDE6A-205ENST00000617647 CHD9Q3L8U1 2897 aa5.62□□□□□ -1.51
PDE6A-205ENST00000617647 IGLV2-18A0A075B6J9 118 aa5.62□□□□□ -1.51
PDE6A-205ENST00000617647 COX7A2LO14548 114 aa5.62□□□□□ -1.51
PDE6A-205ENST00000617647 GAFA1Q96PS6 74 aa5.62□□□□□ -1.51
PDE6A-205ENST00000617647 OVOL2Q9BRP0 275 aa5.62□□□□□ -1.51
PDE6A-205ENST00000617647 CRYGDP07320 174 aa5.61□□□□□ -1.51
PDE6A-205ENST00000617647 MIAQ16674 131 aa5.61□□□□□ -1.51
PDE6A-205ENST00000617647 WFDC9Q8NEX5 89 aa5.61□□□□□ -1.51
PDE6A-205ENST00000617647 POLEQ07864 2286 aa5.61□□□□□ -1.51
PDE6A-205ENST00000617647 IGKV3-20P01619 116 aa5.61□□□□□ -1.51
PDE6A-205ENST00000617647 DAD1P61803 113 aa5.61□□□□□ -1.51
PDE6A-205ENST00000617647 C19orf54Q5BKX5 351 aa5.61□□□□□ -1.51
PDE6A-205ENST00000617647 SOSTDC1Q6X4U4 206 aa5.61□□□□□ -1.51
PDE6A-205ENST00000617647 TMEM86BQ8N661 226 aa5.61□□□□□ -1.51
PDE6A-205ENST00000617647 TOMM7Q9P0U1 55 aa5.61□□□□□ -1.51
PDE6A-205ENST00000617647 MOB4Q9Y3A3 225 aa5.61□□□□□ -1.51
PDE6A-205ENST00000617647 PKDREJQ9NTG1 2253 aa5.61□□□□□ -1.51
PDE6A-205ENST00000617647 SMCR5Q8TEV8 140 aa5.61□□□□□ -1.51
PDE6A-205ENST00000617647 TIMM17AQ99595 171 aa5.61□□□□□ -1.51
PDE6A-205ENST00000617647 CACNA1BQ00975 2339 aa5.61□□□□□ -1.51
PDE6A-205ENST00000617647 SPTBN5Q9NRC6 3674 aaKnown RBP5.6□□□□□ -1.51
PDE6A-205ENST00000617647 FAM27E3Q08E93 113 aa5.6□□□□□ -1.51
PDE6A-205ENST00000617647 FAM223BA6NKX1 122 aa5.6□□□□□ -1.51
PDE6A-205ENST00000617647 BUB1B-PAK6H3BSN5 160 aa5.6□□□□□ -1.51
PDE6A-205ENST00000617647 CD59P13987 128 aa5.6□□□□□ -1.51
PDE6A-205ENST00000617647 ENHOQ6UWT2 76 aa5.6□□□□□ -1.51
PDE6A-205ENST00000617647 CLEC19AQ6UXS0 136 aa5.6□□□□□ -1.51
PDE6A-205ENST00000617647 APC2O95996 2303 aa5.6□□□□□ -1.51
PDE6A-205ENST00000617647 TRANK1O15050 2925 aa5.6□□□□□ -1.51
PDE6A-205ENST00000617647 IGLV4-69A0A075B6H9 119 aa5.59□□□□□ -1.51
PDE6A-205ENST00000617647 I3L2K1 104 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms