RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 LGALS3P17931 250 aaKnown RBP3.03□□□□□ -1.92
HMGB1P50-201ENST00000605814 MALP21145 153 aa3.03□□□□□ -1.92
HMGB1P50-201ENST00000605814 DLX1P56177 255 aa3.03□□□□□ -1.92
HMGB1P50-201ENST00000605814 ZNF415Q09FC8 603 aa3.03□□□□□ -1.92
HMGB1P50-201ENST00000605814 TCF15Q12870 199 aa3.03□□□□□ -1.92
HMGB1P50-201ENST00000605814 C10orf55Q5SWW7 151 aa3.03□□□□□ -1.92
HMGB1P50-201ENST00000605814 KRTAP5-11Q6L8G4 156 aa3.03□□□□□ -1.92
HMGB1P50-201ENST00000605814 HCP5Q6MZN7 132 aa3.03□□□□□ -1.92
HMGB1P50-201ENST00000605814 SFTA2Q6UW10 78 aa3.03□□□□□ -1.92
HMGB1P50-201ENST00000605814 C9orf47Q6ZRZ4 202 aa3.03□□□□□ -1.92
HMGB1P50-201ENST00000605814 TIMM21Q9BVV7 248 aa3.03□□□□□ -1.92
HMGB1P50-201ENST00000605814 TTTY12Q9BZ98 90 aa3.03□□□□□ -1.92
HMGB1P50-201ENST00000605814 DPH3P1Q9H4G8 78 aa3.03□□□□□ -1.92
HMGB1P50-201ENST00000605814 SMAD5-AS1Q9Y6J3 95 aa3.03□□□□□ -1.92
HMGB1P50-201ENST00000605814 ICOSQ9Y6W8 199 aa3.03□□□□□ -1.92
HMGB1P50-201ENST00000605814 GOLGB1Q14789 3259 aaKnown RBP3.03□□□□□ -1.92
HMGB1P50-201ENST00000605814 CACNA1EQ15878 2313 aa3.03□□□□□ -1.92
HMGB1P50-201ENST00000605814 CENPFP49454 3210 aa3.02□□□□□ -1.93
HMGB1P50-201ENST00000605814 NACAE9PAV3 2078 aa3.02□□□□□ -1.93
HMGB1P50-201ENST00000605814 IGHV1-18A0A0C4DH31 117 aa3.02□□□□□ -1.93
HMGB1P50-201ENST00000605814 IGHV3-64DA0A0J9YX35 117 aa3.02□□□□□ -1.93
HMGB1P50-201ENST00000605814 BUB3O43684 328 aa3.02□□□□□ -1.93
HMGB1P50-201ENST00000605814 NXPH4O95158 308 aa3.02□□□□□ -1.93
HMGB1P50-201ENST00000605814 TRGV3P03979 118 aa3.02□□□□□ -1.93
HMGB1P50-201ENST00000605814 ZNF883P0CG24 379 aa3.02□□□□□ -1.93
HMGB1P50-201ENST00000605814 INAFM2P0DMQ5 153 aa3.02□□□□□ -1.93
HMGB1P50-201ENST00000605814 TSPEAR-AS2P59090 65 aa3.02□□□□□ -1.93
HMGB1P50-201ENST00000605814 MRPS36P82909 103 aaKnown RBP3.02□□□□□ -1.93
HMGB1P50-201ENST00000605814 RPL18AQ02543 176 aaKnown RBP3.02□□□□□ -1.93
HMGB1P50-201ENST00000605814 SPINK14Q6IE38 97 aa3.02□□□□□ -1.93
HMGB1P50-201ENST00000605814 LITAFQ99732 161 aa3.02□□□□□ -1.93
HMGB1P50-201ENST00000605814 PRORYQ9H606 182 aa3.02□□□□□ -1.93
HMGB1P50-201ENST00000605814 EDA2RQ9HAV5 297 aa3.02□□□□□ -1.93
HMGB1P50-201ENST00000605814 KAAG1Q9UBP8 84 aa3.02□□□□□ -1.93
HMGB1P50-201ENST00000605814 LINC00527Q9UJ94 153 aa3.02□□□□□ -1.93
HMGB1P50-201ENST00000605814 PYGO1Q9Y3Y4 419 aa3.02□□□□□ -1.93
HMGB1P50-201ENST00000605814 CEP350Q5VT06 3117 aa3.01□□□□□ -1.93
HMGB1P50-201ENST00000605814 IGLV11-55A0A075B6I3 123 aa3.01□□□□□ -1.93
HMGB1P50-201ENST00000605814 TRAV12-2A0A075B6T6 113 aa3.01□□□□□ -1.93
HMGB1P50-201ENST00000605814 IGKV2-40A0A087WW87 121 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P50-201ENST00000605814 TRGV5A0A0B4J1U4 118 aa3.01□□□□□ -1.93
HMGB1P50-201ENST00000605814 TRAV13-1A0A0B4J241 112 aa3.01□□□□□ -1.93
HMGB1P50-201ENST00000605814 IGHV1-3A0A0C4DH29 117 aa3.01□□□□□ -1.93
HMGB1P50-201ENST00000605814 TRBV27A0A0K0K1C4 114 aa3.01□□□□□ -1.93
HMGB1P50-201ENST00000605814 I3L3M4 83 aa3.01□□□□□ -1.93
HMGB1P50-201ENST00000605814 CDX4O14627 284 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P50-201ENST00000605814 IGKV2D-40P01614 121 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P50-201ENST00000605814 IGLV1-47P01700 117 aa3.01□□□□□ -1.93
HMGB1P50-201ENST00000605814 IGHV4-39P01824 125 aa3.01□□□□□ -1.93
HMGB1P50-201ENST00000605814 UBE2E1P51965 193 aa3.01□□□□□ -1.93
HMGB1P50-201ENST00000605814 LINC00315P59091 139 aa3.01□□□□□ -1.93
HMGB1P50-201ENST00000605814 RHOHQ15669 191 aa3.01□□□□□ -1.93
HMGB1P50-201ENST00000605814 SPANXN1Q5VSR9 72 aa3.01□□□□□ -1.93
HMGB1P50-201ENST00000605814 Q6JHZ5 121 aa3.01□□□□□ -1.93
HMGB1P50-201ENST00000605814 GFRALQ6UXV0 394 aa3.01□□□□□ -1.93
HMGB1P50-201ENST00000605814 ASCL5Q7RTU5 278 aa3.01□□□□□ -1.93
HMGB1P50-201ENST00000605814 APRG1Q8IVJ8 170 aa3.01□□□□□ -1.93
HMGB1P50-201ENST00000605814 DYNAPQ8N1N2 210 aa3.01□□□□□ -1.93
HMGB1P50-201ENST00000605814 C14orf178Q8N769 122 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P50-201ENST00000605814 MDS2Q8NDY4 140 aa3.01□□□□□ -1.93
HMGB1P50-201ENST00000605814 NPBQ8NG41 125 aa3.01□□□□□ -1.93
HMGB1P50-201ENST00000605814 SAP25Q8TEE9 199 aa3.01□□□□□ -1.93
HMGB1P50-201ENST00000605814 LINC00477Q96M19 166 aa3.01□□□□□ -1.93
HMGB1P50-201ENST00000605814 CCL13Q99616 98 aa3.01□□□□□ -1.93
HMGB1P50-201ENST00000605814 JPT2Q9H910 190 aa3.01□□□□□ -1.93
HMGB1P50-201ENST00000605814 SLC25A15Q9Y619 301 aa3.01□□□□□ -1.93
HMGB1P50-201ENST00000605814 KIF25-AS1Q9Y6Z4 181 aa3.01□□□□□ -1.93
HMGB1P50-201ENST00000605814 CACNA1GO43497 2377 aa3.01□□□□□ -1.93
HMGB1P50-201ENST00000605814 COL27A1Q8IZC6 1860 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P50-201ENST00000605814 TRBV10-3A0A0K0K1G6 114 aa3□□□□□ -1.93
HMGB1P50-201ENST00000605814 TINCRA0A1B0GVN0 87 aa3□□□□□ -1.93
HMGB1P50-201ENST00000605814 hADV29S1A0JD25 119 aa3□□□□□ -1.93
HMGB1P50-201ENST00000605814 LY6LH3BQJ8 138 aa3□□□□□ -1.93
HMGB1P50-201ENST00000605814 COX7A2LO14548 114 aa3□□□□□ -1.93
HMGB1P50-201ENST00000605814 RNASE4P34096 147 aaKnown RBP3□□□□□ -1.93
HMGB1P50-201ENST00000605814 MIAQ16674 131 aa3□□□□□ -1.93
HMGB1P50-201ENST00000605814 C4orf26Q17RF5 130 aa3□□□□□ -1.93
HMGB1P50-201ENST00000605814 NSUN5P1Q3KNT7 163 aa3□□□□□ -1.93
HMGB1P50-201ENST00000605814 TMEM61Q8N0U2 210 aa3□□□□□ -1.93
HMGB1P50-201ENST00000605814 C3orf56Q8N813 242 aa3□□□□□ -1.93
HMGB1P50-201ENST00000605814 SMCR5Q8TEV8 140 aa3□□□□□ -1.93
HMGB1P50-201ENST00000605814 COPS9Q8WXC6 57 aa3□□□□□ -1.93
HMGB1P50-201ENST00000605814 FAM19A4Q96LR4 140 aa3□□□□□ -1.93
HMGB1P50-201ENST00000605814 OBSCN-AS1Q96MR7 158 aa3□□□□□ -1.93
HMGB1P50-201ENST00000605814 PIMREGQ9BSJ6 248 aa3□□□□□ -1.93
HMGB1P50-201ENST00000605814 C1orf43Q9BWL3 253 aa3□□□□□ -1.93
HMGB1P50-201ENST00000605814 KLK5Q9Y337 293 aaPredicted RBP3□□□□□ -1.93
HMGB1P50-201ENST00000605814 SERP1Q9Y6X1 66 aa3□□□□□ -1.93
HMGB1P50-201ENST00000605814 ARHGAP32A7KAX9 2087 aa2.99□□□□□ -1.93
HMGB1P50-201ENST00000605814 IGHV3OR16-10A0A075B7F0 116 aa2.99□□□□□ -1.93
HMGB1P50-201ENST00000605814 SMIM26A0A096LP01 95 aa2.99□□□□□ -1.93
HMGB1P50-201ENST00000605814 TRAV26-2A0A0B4J265 109 aa2.99□□□□□ -1.93
HMGB1P50-201ENST00000605814 TRAV21A0A0B4J279 112 aa2.99□□□□□ -1.93
HMGB1P50-201ENST00000605814 MBD3L4A6NDZ8 208 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P50-201ENST00000605814 MBD3L3A6NE82 208 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P50-201ENST00000605814 MBD3L5A6NJ08 208 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P50-201ENST00000605814 BUB1B-PAK6H3BSN5 160 aa2.99□□□□□ -1.93
HMGB1P50-201ENST00000605814 J3QLI3 93 aa2.99□□□□□ -1.93
HMGB1P50-201ENST00000605814 LINC01565O15544 149 aa2.99□□□□□ -1.93
HMGB1P50-201ENST00000605814 NDUFB3O43676 98 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms