RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 CHCHD10Q8WYQ3 142 aaPredicted RBP2.4□□□□□ -2.03
HERC3-213ENST00000598772 C9orf16Q9BUW7 83 aa2.4□□□□□ -2.03
HERC3-213ENST00000598772 C14orf166Q9Y224 244 aaKnown RBP2.4□□□□□ -2.03
HERC3-213ENST00000598772 LSM2Q9Y333 95 aaKnown RBP2.4□□□□□ -2.03
HERC3-213ENST00000598772 STRAPQ9Y3F4 350 aaKnown RBP2.4□□□□□ -2.03
HERC3-213ENST00000598772 A0A0A6YYH2 397 aa2.39□□□□□ -2.03
HERC3-213ENST00000598772 TRBV7-9A0A0J9YWB2 115 aa2.39□□□□□ -2.03
HERC3-213ENST00000598772 A6NJ64 397 aa2.39□□□□□ -2.03
HERC3-213ENST00000598772 RHODO00212 210 aa2.39□□□□□ -2.03
HERC3-213ENST00000598772 MED6O75586 246 aa2.39□□□□□ -2.03
HERC3-213ENST00000598772 Q6ZRG5 221 aa2.39□□□□□ -2.03
HERC3-213ENST00000598772 NTM-AS1Q6ZSK4 140 aa2.39□□□□□ -2.03
HERC3-213ENST00000598772 ISOC2Q96AB3 205 aa2.39□□□□□ -2.03
HERC3-213ENST00000598772 S100A16Q96FQ6 103 aaKnown RBP2.39□□□□□ -2.03
HERC3-213ENST00000598772 DIRAS2Q96HU8 199 aa2.39□□□□□ -2.03
HERC3-213ENST00000598772 AQP10Q96PS8 301 aa2.39□□□□□ -2.03
HERC3-213ENST00000598772 NAA60Q9H7X0 242 aa2.39□□□□□ -2.03
HERC3-213ENST00000598772 WFDC1Q9HC57 220 aa2.39□□□□□ -2.03
HERC3-213ENST00000598772 TREM1Q9NP99 234 aa2.39□□□□□ -2.03
HERC3-213ENST00000598772 CCDC59Q9P031 241 aaKnown RBP2.39□□□□□ -2.03
HERC3-213ENST00000598772 MGAT4CQ9UBM8 478 aa2.39□□□□□ -2.03
HERC3-213ENST00000598772 IGHV1-24A0A0C4DH33 117 aa2.38□□□□□ -2.03
HERC3-213ENST00000598772 IGHV1-58A0A0C4DH39 117 aa2.38□□□□□ -2.03
HERC3-213ENST00000598772 TRBV10-1A0A0K0K1A3 114 aa2.38□□□□□ -2.03
HERC3-213ENST00000598772 PRSS46E5RG02 174 aa2.38□□□□□ -2.03
HERC3-213ENST00000598772 M0QXV9 152 aa2.38□□□□□ -2.03
HERC3-213ENST00000598772 UBE2L6O14933 153 aa2.38□□□□□ -2.03
HERC3-213ENST00000598772 B3GALNT1O75752 331 aa2.38□□□□□ -2.03
HERC3-213ENST00000598772 APOMO95445 188 aa2.38□□□□□ -2.03
HERC3-213ENST00000598772 XCL1P47992 114 aa2.38□□□□□ -2.03
HERC3-213ENST00000598772 CAMPP49913 170 aa2.38□□□□□ -2.03
HERC3-213ENST00000598772 RANP62826 216 aaKnown RBP2.38□□□□□ -2.03
HERC3-213ENST00000598772 ARL16Q0P5N6 197 aa2.38□□□□□ -2.03
HERC3-213ENST00000598772 RNF151Q2KHN1 245 aa2.38□□□□□ -2.03
HERC3-213ENST00000598772 GAGE2EQ4V326 116 aa2.38□□□□□ -2.03
HERC3-213ENST00000598772 UFSP1Q6NVU6 142 aa2.38□□□□□ -2.03
HERC3-213ENST00000598772 SNX29P2Q8IUI4 249 aa2.38□□□□□ -2.03
HERC3-213ENST00000598772 NEXN-AS1Q8NBZ9 246 aa2.38□□□□□ -2.03
HERC3-213ENST00000598772 OR1L4Q8NGR5 311 aa2.38□□□□□ -2.03
HERC3-213ENST00000598772 SGK494Q96LW2 274 aa2.38□□□□□ -2.03
HERC3-213ENST00000598772 CIB3Q96Q77 187 aaPredicted RBP2.38□□□□□ -2.03
HERC3-213ENST00000598772 CAMK2N2Q96S95 79 aa2.38□□□□□ -2.03
HERC3-213ENST00000598772 KRTAP2-2Q9BYT5 123 aa2.38□□□□□ -2.03
HERC3-213ENST00000598772 KRTAP2-1Q9BYU5 128 aa2.38□□□□□ -2.03
HERC3-213ENST00000598772 CTDSP1Q9GZU7 261 aa2.38□□□□□ -2.03
HERC3-213ENST00000598772 C11orf21Q9P2W6 132 aa2.38□□□□□ -2.03
HERC3-213ENST00000598772 GAGE2DQ9UEU5 116 aa2.38□□□□□ -2.03
HERC3-213ENST00000598772 NDUFA12Q9UI09 145 aa2.38□□□□□ -2.03
HERC3-213ENST00000598772 KCNIP3Q9Y2W7 256 aa2.38□□□□□ -2.03
HERC3-213ENST00000598772 IGLV4-69A0A075B6H9 119 aa2.37□□□□□ -2.03
HERC3-213ENST00000598772 TRBV6-1A0A0K0K1D8 114 aa2.37□□□□□ -2.03
HERC3-213ENST00000598772 LOC100506127A0A0U1RQW1 187 aa2.37□□□□□ -2.03
HERC3-213ENST00000598772 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.37□□□□□ -2.03
HERC3-213ENST00000598772 M0R036 132 aa2.37□□□□□ -2.03
HERC3-213ENST00000598772 M0R381 172 aa2.37□□□□□ -2.03
HERC3-213ENST00000598772 SYNGR2O43760 224 aa2.37□□□□□ -2.03
HERC3-213ENST00000598772 CIB2O75838 187 aa2.37□□□□□ -2.03
HERC3-213ENST00000598772 MT2AP02795 61 aa2.37□□□□□ -2.03
HERC3-213ENST00000598772 NBEAP1P0C6P0 100 aa2.37□□□□□ -2.03
HERC3-213ENST00000598772 RNASE3P12724 160 aaKnown RBP2.37□□□□□ -2.03
HERC3-213ENST00000598772 RPL28P46779 137 aaKnown RBP2.37□□□□□ -2.03
HERC3-213ENST00000598772 GABARAPL2P60520 117 aa2.37□□□□□ -2.03
HERC3-213ENST00000598772 MEF2BQ02080 365 aaPredicted RBP2.37□□□□□ -2.03
HERC3-213ENST00000598772 MLLT11Q13015 90 aaPredicted RBP2.37□□□□□ -2.03
HERC3-213ENST00000598772 ZNF56Q15929 161 aa2.37□□□□□ -2.03
HERC3-213ENST00000598772 TMEM97Q5BJF2 176 aa2.37□□□□□ -2.03
HERC3-213ENST00000598772 RNASE10Q5GAN6 216 aaKnown RBP2.37□□□□□ -2.03
HERC3-213ENST00000598772 LINC00242Q5T6M2 205 aa2.37□□□□□ -2.03
HERC3-213ENST00000598772 MIC13Q5XKP0 118 aa2.37□□□□□ -2.03
HERC3-213ENST00000598772 C8orf59Q8N0T1 100 aaPredicted RBP2.37□□□□□ -2.03
HERC3-213ENST00000598772 OR5A1Q8NGJ0 315 aa2.37□□□□□ -2.03
HERC3-213ENST00000598772 MITD1Q8WV92 249 aa2.37□□□□□ -2.03
HERC3-213ENST00000598772 PTH2Q96A98 100 aa2.37□□□□□ -2.03
HERC3-213ENST00000598772 SCN3BQ9NY72 215 aa2.37□□□□□ -2.03
HERC3-213ENST00000598772 PSENENQ9NZ42 101 aa2.37□□□□□ -2.03
HERC3-213ENST00000598772 ANAPC10Q9UM13 185 aa2.37□□□□□ -2.03
HERC3-213ENST00000598772 PSG8Q9UQ74 426 aa2.37□□□□□ -2.03
HERC3-213ENST00000598772 TRDV1A0A1B0GX56 115 aa2.36□□□□□ -2.03
HERC3-213ENST00000598772 H3BVH4 76 aa2.36□□□□□ -2.03
HERC3-213ENST00000598772 CD3DP04234 171 aa2.36□□□□□ -2.03
HERC3-213ENST00000598772 GNAO1P09471 354 aa2.36□□□□□ -2.03
HERC3-213ENST00000598772 METTL15P1P0C7V9 234 aa2.36□□□□□ -2.03
HERC3-213ENST00000598772 SDC2P34741 201 aa2.36□□□□□ -2.03
HERC3-213ENST00000598772 CAMLGP49069 296 aa2.36□□□□□ -2.03
HERC3-213ENST00000598772 TAS2R19P59542 299 aa2.36□□□□□ -2.03
HERC3-213ENST00000598772 PDE6HQ13956 83 aa2.36□□□□□ -2.03
HERC3-213ENST00000598772 SPAG11AQ6PDA7 123 aa2.36□□□□□ -2.03
HERC3-213ENST00000598772 GOLT1AQ6ZVE7 132 aa2.36□□□□□ -2.03
HERC3-213ENST00000598772 C3orf22Q8N5N4 141 aa2.36□□□□□ -2.03
HERC3-213ENST00000598772 OR11H4Q8NGC9 324 aa2.36□□□□□ -2.03
HERC3-213ENST00000598772 TERB2Q8NHR7 220 aa2.36□□□□□ -2.03
HERC3-213ENST00000598772 PFDN5Q99471 154 aa2.36□□□□□ -2.03
HERC3-213ENST00000598772 RTBDNQ9BSG5 229 aaPredicted RBP2.36□□□□□ -2.03
HERC3-213ENST00000598772 TMEM243Q9BU79 118 aa2.36□□□□□ -2.03
HERC3-213ENST00000598772 KRTAP3-1Q9BYR8 98 aa2.36□□□□□ -2.03
HERC3-213ENST00000598772 SLIRPQ9GZT3 109 aaKnown RBP2.36□□□□□ -2.03
HERC3-213ENST00000598772 LENEPQ9Y5L5 61 aa2.36□□□□□ -2.03
HERC3-213ENST00000598772 GRIFINA4D1Z8 144 aa2.35□□□□□ -2.03
HERC3-213ENST00000598772 C9orf92A6NGG3 77 aa2.35□□□□□ -2.03
HERC3-213ENST00000598772 GCGP01275 180 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms