RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 A0A0B4J2C4 111 aa2.73□□□□□ -1.97
VMP1-216ENST00000592790 IGHV7-4-1A0A0J9YVY3 117 aa2.73□□□□□ -1.97
VMP1-216ENST00000592790 RBMY1BA6NDE4 496 aaKnown RBP2.73□□□□□ -1.97
VMP1-216ENST00000592790 RBMY1EA6NEQ0 496 aaKnown RBP2.73□□□□□ -1.97
VMP1-216ENST00000592790 RBMY1DP0C7P1 496 aaKnown RBP2.73□□□□□ -1.97
VMP1-216ENST00000592790 RBMY1A1P0DJD3 496 aaKnown RBP2.73□□□□□ -1.97
VMP1-216ENST00000592790 RBMY1CP0DJD4 496 aa2.73□□□□□ -1.97
VMP1-216ENST00000592790 IGFL4Q6B9Z1 124 aa2.73□□□□□ -1.97
VMP1-216ENST00000592790 ANKRD29Q8N6D5 301 aa2.73□□□□□ -1.97
VMP1-216ENST00000592790 NEXN-AS1Q8NBZ9 246 aa2.73□□□□□ -1.97
VMP1-216ENST00000592790 ODF3Q96PU9 254 aa2.73□□□□□ -1.97
VMP1-216ENST00000592790 FN1P02751 2386 aaKnown RBP2.73□□□□□ -1.97
VMP1-216ENST00000592790 ANK2Q01484 3957 aa2.73□□□□□ -1.97
VMP1-216ENST00000592790 ZNF561-AS1K7EIQ3 104 aa2.72□□□□□ -1.97
VMP1-216ENST00000592790 K7EMT4 169 aa2.72□□□□□ -1.97
VMP1-216ENST00000592790 M0QXV9 152 aa2.72□□□□□ -1.97
VMP1-216ENST00000592790 MRPS12O15235 138 aaKnown RBP2.72□□□□□ -1.97
VMP1-216ENST00000592790 FCN3O75636 299 aa2.72□□□□□ -1.97
VMP1-216ENST00000592790 ZNF876PQ49A33 203 aa2.72□□□□□ -1.97
VMP1-216ENST00000592790 DUX3Q96PT4 197 aa2.72□□□□□ -1.97
VMP1-216ENST00000592790 SPAG8Q99932 426 aaPredicted RBP2.72□□□□□ -1.97
VMP1-216ENST00000592790 MSRB1Q9NZV6 116 aa2.72□□□□□ -1.97
VMP1-216ENST00000592790 CMYA5Q8N3K9 4069 aa2.72□□□□□ -1.97
VMP1-216ENST00000592790 IGHV1OR15-1A0A075B7D0 117 aa2.72□□□□□ -1.97
VMP1-216ENST00000592790 TRAV26-2A0A0B4J265 109 aa2.72□□□□□ -1.97
VMP1-216ENST00000592790 TMEM89A2RUT3 159 aa2.72□□□□□ -1.97
VMP1-216ENST00000592790 ATP5G1P05496 136 aa2.72□□□□□ -1.97
VMP1-216ENST00000592790 AMTNQ6UX39 209 aa2.72□□□□□ -1.97
VMP1-216ENST00000592790 ZFP2Q6ZN57 461 aa2.72□□□□□ -1.97
VMP1-216ENST00000592790 SH2D6Q7Z4S9 175 aa2.72□□□□□ -1.97
VMP1-216ENST00000592790 DNAJC30Q96LL9 226 aa2.72□□□□□ -1.97
VMP1-216ENST00000592790 P0DMU3 169 aa2.72□□□□□ -1.97
VMP1-216ENST00000592790 FAM231AP0DMU4 169 aa2.72□□□□□ -1.97
VMP1-216ENST00000592790 FAM231CP0DMU5 169 aa2.72□□□□□ -1.97
VMP1-216ENST00000592790 SRD5A1P18405 259 aa2.72□□□□□ -1.97
VMP1-216ENST00000592790 C5orf47Q569G3 176 aa2.72□□□□□ -1.97
VMP1-216ENST00000592790 SFTA2Q6UW10 78 aa2.72□□□□□ -1.97
VMP1-216ENST00000592790 NDUFA11Q86Y39 141 aa2.72□□□□□ -1.97
VMP1-216ENST00000592790 C11orf44Q8N8P7 122 aa2.72□□□□□ -1.97
VMP1-216ENST00000592790 Q8N9W7 124 aa2.72□□□□□ -1.97
VMP1-216ENST00000592790 TMEM126AQ9H061 195 aa2.72□□□□□ -1.97
VMP1-216ENST00000592790 F8P00451 2351 aa2.72□□□□□ -1.97
VMP1-216ENST00000592790 IGKV3D-20A0A0C4DH25 116 aa2.72□□□□□ -1.97
VMP1-216ENST00000592790 TRBV10-2A0A0K0K1G8 114 aa2.72□□□□□ -1.97
VMP1-216ENST00000592790 CENPVL3A0A0U1RRI6 287 aa2.72□□□□□ -1.97
VMP1-216ENST00000592790 ZNF80P51504 273 aaPredicted RBP2.72□□□□□ -1.97
VMP1-216ENST00000592790 PRB3Q04118 309 aaPredicted RBP2.72□□□□□ -1.97
VMP1-216ENST00000592790 SLC25A29Q8N8R3 303 aa2.72□□□□□ -1.97
VMP1-216ENST00000592790 MDFICQ9P1T7 246 aa2.72□□□□□ -1.97
VMP1-216ENST00000592790 HHLA3Q9XRX5 114 aa2.72□□□□□ -1.97
VMP1-216ENST00000592790 U3KQE9 123 aa2.72□□□□□ -1.97
VMP1-216ENST00000592790 INTS1Q8N201 2190 aaKnown RBP2.71□□□□□ -1.97
VMP1-216ENST00000592790 TRBV7-3A0A075B6L6 115 aa2.71□□□□□ -1.98
VMP1-216ENST00000592790 TRAV12-3A0A0B4J271 114 aa2.71□□□□□ -1.98
VMP1-216ENST00000592790 K7ENP7 123 aa2.71□□□□□ -1.98
VMP1-216ENST00000592790 GATA1P15976 413 aaPredicted RBP2.71□□□□□ -1.98
VMP1-216ENST00000592790 NDPQ00604 133 aa2.71□□□□□ -1.98
VMP1-216ENST00000592790 LY6EQ16553 131 aa2.71□□□□□ -1.98
VMP1-216ENST00000592790 Q6ZUT4 128 aa2.71□□□□□ -1.98
VMP1-216ENST00000592790 NRACQ8N912 160 aa2.71□□□□□ -1.98
VMP1-216ENST00000592790 DPH3Q96FX2 82 aa2.71□□□□□ -1.98
VMP1-216ENST00000592790 CCL19Q99731 98 aa2.71□□□□□ -1.98
VMP1-216ENST00000592790 IGHV4OR15-8A0A075B7B6 117 aa2.71□□□□□ -1.98
VMP1-216ENST00000592790 A0A087WW49 117 aa2.71□□□□□ -1.98
VMP1-216ENST00000592790 A0A096LNJ9 63 aa2.71□□□□□ -1.98
VMP1-216ENST00000592790 TRBV6-5A0A0K0K1A5 114 aa2.71□□□□□ -1.98
VMP1-216ENST00000592790 HERVK_113P63121 156 aa2.71□□□□□ -1.98
VMP1-216ENST00000592790 LINC01620Q4KN68 170 aa2.71□□□□□ -1.98
VMP1-216ENST00000592790 CFAP126Q5VTH2 177 aa2.71□□□□□ -1.98
VMP1-216ENST00000592790 PSMG3-AS1Q96PY0 264 aa2.71□□□□□ -1.98
VMP1-216ENST00000592790 NDUFA12Q9UI09 145 aa2.71□□□□□ -1.98
VMP1-216ENST00000592790 PLA2G2DQ9UNK4 145 aa2.71□□□□□ -1.98
VMP1-216ENST00000592790 SVILO95425 2214 aa2.71□□□□□ -1.98
VMP1-216ENST00000592790 TLN1Q9Y490 2541 aaKnown RBP2.71□□□□□ -1.98
VMP1-216ENST00000592790 IGKV2D-26A0A0A0MRZ7 120 aa2.71□□□□□ -1.98
VMP1-216ENST00000592790 A0A0J9YXY3 114 aa2.71□□□□□ -1.98
VMP1-216ENST00000592790 PCNX2A6NKB5 2137 aa2.71□□□□□ -1.98
VMP1-216ENST00000592790 IGHV3-11P01762 117 aa2.71□□□□□ -1.98
VMP1-216ENST00000592790 CRPP02741 224 aa2.71□□□□□ -1.98
VMP1-216ENST00000592790 HTN1P15515 57 aa2.71□□□□□ -1.98
VMP1-216ENST00000592790 MALP21145 153 aa2.71□□□□□ -1.98
VMP1-216ENST00000592790 HERV-K104P63124 156 aa2.71□□□□□ -1.98
VMP1-216ENST00000592790 RPL36AP83881 106 aaKnown RBP2.71□□□□□ -1.98
VMP1-216ENST00000592790 TCF15Q12870 199 aa2.71□□□□□ -1.98
VMP1-216ENST00000592790 NSUN5P1Q3KNT7 163 aa2.71□□□□□ -1.98
VMP1-216ENST00000592790 TET2Q6N021 2002 aaPredicted RBP2.71□□□□□ -1.98
VMP1-216ENST00000592790 Q6Q795 121 aa2.71□□□□□ -1.98
VMP1-216ENST00000592790 Q8N6K4 173 aa2.71□□□□□ -1.98
VMP1-216ENST00000592790 RPL36ALQ969Q0 106 aaKnown RBP2.71□□□□□ -1.98
VMP1-216ENST00000592790 A0A0J9YX75 114 aa2.7□□□□□ -1.98
VMP1-216ENST00000592790 PRAC2D3DTV9 90 aa2.7□□□□□ -1.98
VMP1-216ENST00000592790 LCE2BO14633 110 aa2.7□□□□□ -1.98
VMP1-216ENST00000592790 ATP5J2P56134 94 aa2.7□□□□□ -1.98
VMP1-216ENST00000592790 SUMO4Q6EEV6 95 aa2.7□□□□□ -1.98
VMP1-216ENST00000592790 C5orf56Q8N8D9 126 aa2.7□□□□□ -1.98
VMP1-216ENST00000592790 NTN5Q8WTR8 489 aaPredicted RBP2.7□□□□□ -1.98
VMP1-216ENST00000592790 LINC01587Q99440 93 aa2.7□□□□□ -1.98
VMP1-216ENST00000592790 SELENOKQ9Y6D0 94 aa2.7□□□□□ -1.98
VMP1-216ENST00000592790 GTF3C1Q12789 2109 aa2.7□□□□□ -1.98
VMP1-216ENST00000592790 A0A087WWL8 130 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms