RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 FAM74A4Q5TZK3 123 aa11.9□□□□□ -0.5
PRKCSH-211ENST00000590098 FMC1Q96HJ9 113 aa11.9□□□□□ -0.5
PRKCSH-211ENST00000590098 FAM30AQ9NZY2 134 aa11.9□□□□□ -0.5
PRKCSH-211ENST00000590098 PHLDA3Q9Y5J5 127 aa11.9□□□□□ -0.5
PRKCSH-211ENST00000590098 COX11Q9Y6N1 276 aa11.9□□□□□ -0.5
PRKCSH-211ENST00000590098 LECT2O14960 151 aa11.89□□□□□ -0.51
PRKCSH-211ENST00000590098 SH2D1AO60880 128 aa11.89□□□□□ -0.51
PRKCSH-211ENST00000590098 WFDC2Q14508 124 aa11.89□□□□□ -0.51
PRKCSH-211ENST00000590098 RMI2Q96E14 147 aa11.89□□□□□ -0.51
PRKCSH-211ENST00000590098 A0A087WWL8 130 aa11.88□□□□□ -0.51
PRKCSH-211ENST00000590098 MAP1LC3B2A6NCE7 125 aa11.88□□□□□ -0.51
PRKCSH-211ENST00000590098 SEC11BP0C7V7 166 aa11.88□□□□□ -0.51
PRKCSH-211ENST00000590098 TPT1P13693 172 aaKnown RBP11.88□□□□□ -0.51
PRKCSH-211ENST00000590098 COX8CQ7Z4L0 72 aa11.88□□□□□ -0.51
PRKCSH-211ENST00000590098 STOML3Q8TAV4 291 aa11.88□□□□□ -0.51
PRKCSH-211ENST00000590098 MAP1LC3BQ9GZQ8 125 aa11.88□□□□□ -0.51
PRKCSH-211ENST00000590098 TMSB15BA0A087X1C1 80 aa11.87□□□□□ -0.51
PRKCSH-211ENST00000590098 M0R381 172 aa11.87□□□□□ -0.51
PRKCSH-211ENST00000590098 CST9LP1Q5W188 147 aa11.87□□□□□ -0.51
PRKCSH-211ENST00000590098 SFRP2Q96HF1 295 aa11.87□□□□□ -0.51
PRKCSH-211ENST00000590098 TCEAL7Q9BRU2 100 aa11.87□□□□□ -0.51
PRKCSH-211ENST00000590098 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.86□□□□□ -0.51
PRKCSH-211ENST00000590098 ZNF674Q2M3X9 581 aa11.86□□□□□ -0.51
PRKCSH-211ENST00000590098 NIT1Q86X76 327 aa11.86□□□□□ -0.51
PRKCSH-211ENST00000590098 BAALCQ8WXS3 180 aa11.86□□□□□ -0.51
PRKCSH-211ENST00000590098 A0A087WX48 190 aa11.85□□□□□ -0.51
PRKCSH-211ENST00000590098 TRBV6-1A0A0K0K1D8 114 aa11.85□□□□□ -0.51
PRKCSH-211ENST00000590098 FHITP49789 147 aa11.85□□□□□ -0.51
PRKCSH-211ENST00000590098 LINC01559Q495D7 138 aa11.85□□□□□ -0.51
PRKCSH-211ENST00000590098 KCNIP4Q6PIL6 250 aa11.85□□□□□ -0.51
PRKCSH-211ENST00000590098 ZFP82Q8N141 532 aa11.85□□□□□ -0.51
PRKCSH-211ENST00000590098 KLK12Q9UKR0 248 aa11.85□□□□□ -0.51
PRKCSH-211ENST00000590098 IGKV2D-24A0A075B6R9 120 aa11.84□□□□□ -0.51
PRKCSH-211ENST00000590098 TRBV10-1A0A0K0K1A3 114 aa11.84□□□□□ -0.51
PRKCSH-211ENST00000590098 ARPC5O15511 151 aa11.84□□□□□ -0.51
PRKCSH-211ENST00000590098 LTAP01374 205 aa11.84□□□□□ -0.51
PRKCSH-211ENST00000590098 AKR1C3P42330 323 aa11.84□□□□□ -0.51
PRKCSH-211ENST00000590098 RPL36AP83881 106 aaKnown RBP11.84□□□□□ -0.51
PRKCSH-211ENST00000590098 ELOBQ15370 118 aa11.84□□□□□ -0.51
PRKCSH-211ENST00000590098 RPL36ALQ969Q0 106 aaKnown RBP11.84□□□□□ -0.51
PRKCSH-211ENST00000590098 RBFOX3A6NFN3 312 aa11.83□□□□□ -0.52
PRKCSH-211ENST00000590098 PLA2G1BP04054 148 aaKnown RBP11.83□□□□□ -0.52
PRKCSH-211ENST00000590098 Q6ZSA8 131 aa11.83□□□□□ -0.52
PRKCSH-211ENST00000590098 Q8N976 141 aa11.83□□□□□ -0.52
PRKCSH-211ENST00000590098 CYTL1Q9NRR1 136 aa11.83□□□□□ -0.52
PRKCSH-211ENST00000590098 UBE2WQ96B02 151 aa11.82□□□□□ -0.52
PRKCSH-211ENST00000590098 CHCHD7Q9BUK0 85 aa11.82□□□□□ -0.52
PRKCSH-211ENST00000590098 TRBV7-3A0A075B6L6 115 aa11.81□□□□□ -0.52
PRKCSH-211ENST00000590098 G3V3Q6 166 aa11.81□□□□□ -0.52
PRKCSH-211ENST00000590098 PAGE4O60829 102 aa11.81□□□□□ -0.52
PRKCSH-211ENST00000590098 J3QL48 77 aa11.8□□□□□ -0.52
PRKCSH-211ENST00000590098 S100A9P06702 114 aaKnown RBP11.8□□□□□ -0.52
PRKCSH-211ENST00000590098 UBE2D3P61077 147 aa11.8□□□□□ -0.52
PRKCSH-211ENST00000590098 UBE2D2P62837 147 aa11.8□□□□□ -0.52
PRKCSH-211ENST00000590098 LINC00528Q8N1L1 170 aa11.8□□□□□ -0.52
PRKCSH-211ENST00000590098 DNAJC30Q96LL9 226 aa11.8□□□□□ -0.52
PRKCSH-211ENST00000590098 TMEM262E9PQX1 116 aa11.79□□□□□ -0.52
PRKCSH-211ENST00000590098 RAB4BP61018 213 aa11.79□□□□□ -0.52
PRKCSH-211ENST00000590098 RGS21Q2M5E4 152 aa11.79□□□□□ -0.52
PRKCSH-211ENST00000590098 LINC01620Q4KN68 170 aa11.79□□□□□ -0.52
PRKCSH-211ENST00000590098 SFT2D1Q8WV19 159 aa11.79□□□□□ -0.52
PRKCSH-211ENST00000590098 Q0VG73 95 aa11.78□□□□□ -0.52
PRKCSH-211ENST00000590098 ZNF56Q15929 161 aa11.78□□□□□ -0.52
PRKCSH-211ENST00000590098 FAM213BQ8TBF2 198 aa11.78□□□□□ -0.52
PRKCSH-211ENST00000590098 ZNF471Q9BX82 626 aaPredicted RBP11.78□□□□□ -0.52
PRKCSH-211ENST00000590098 PFDN1O60925 122 aa11.77□□□□□ -0.53
PRKCSH-211ENST00000590098 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.77□□□□□ -0.53
PRKCSH-211ENST00000590098 OR10G8Q8NGN5 311 aa11.77□□□□□ -0.53
PRKCSH-211ENST00000590098 TRBV6-8A0A0A6YYG3 113 aa11.76□□□□□ -0.53
PRKCSH-211ENST00000590098 A0A1B0GV50 99 aa11.76□□□□□ -0.53
PRKCSH-211ENST00000590098 UMAD1C9J7I0 102 aa11.76□□□□□ -0.53
PRKCSH-211ENST00000590098 SMLR1H3BR10 107 aa11.76□□□□□ -0.53
PRKCSH-211ENST00000590098 CXCL1P09341 107 aa11.76□□□□□ -0.53
PRKCSH-211ENST00000590098 RPL19P84098 196 aaKnown RBP11.76□□□□□ -0.53
PRKCSH-211ENST00000590098 ATRAIDQ6UW56 229 aa11.76□□□□□ -0.53
PRKCSH-211ENST00000590098 SCXQ7RTU7 201 aa11.76□□□□□ -0.53
PRKCSH-211ENST00000590098 BAGE2Q86Y30 109 aa11.76□□□□□ -0.53
PRKCSH-211ENST00000590098 OR10AG1Q8NH19 301 aa11.76□□□□□ -0.53
PRKCSH-211ENST00000590098 MBD3L1Q8WWY6 194 aa11.76□□□□□ -0.53
PRKCSH-211ENST00000590098 C1orf43Q9BWL3 253 aa11.76□□□□□ -0.53
PRKCSH-211ENST00000590098 SCO2A0A1W2PP80 73 aa11.75□□□□□ -0.53
PRKCSH-211ENST00000590098 CRPP02741 224 aa11.75□□□□□ -0.53
PRKCSH-211ENST00000590098 C14orf177Q52M58 125 aa11.75□□□□□ -0.53
PRKCSH-211ENST00000590098 SPANXN1Q5VSR9 72 aa11.75□□□□□ -0.53
PRKCSH-211ENST00000590098 KCNRGQ8N5I3 272 aa11.75□□□□□ -0.53
PRKCSH-211ENST00000590098 F5H697 171 aa11.74□□□□□ -0.53
PRKCSH-211ENST00000590098 ZNF345Q14585 488 aa11.74□□□□□ -0.53
PRKCSH-211ENST00000590098 PRR27Q6MZM9 219 aa11.74□□□□□ -0.53
PRKCSH-211ENST00000590098 C15orf54Q8N8G6 183 aa11.74□□□□□ -0.53
PRKCSH-211ENST00000590098 NEXN-AS1Q8NBZ9 246 aa11.74□□□□□ -0.53
PRKCSH-211ENST00000590098 DEFB104AQ8WTQ1 72 aa11.74□□□□□ -0.53
PRKCSH-211ENST00000590098 CHAC1Q9BUX1 264 aa11.74□□□□□ -0.53
PRKCSH-211ENST00000590098 MLST8Q9BVC4 326 aa11.74□□□□□ -0.53
PRKCSH-211ENST00000590098 PKIAP61925 76 aa11.73□□□□□ -0.53
PRKCSH-211ENST00000590098 CHCHD5Q9BSY4 110 aa11.73□□□□□ -0.53
PRKCSH-211ENST00000590098 MUC21A0A0G2JKD1 596 aa11.72□□□□□ -0.53
PRKCSH-211ENST00000590098 MUC21A0A140T8X8 626 aa11.72□□□□□ -0.53
PRKCSH-211ENST00000590098 SNAI2O43623 268 aa11.72□□□□□ -0.53
PRKCSH-211ENST00000590098 ANGP03950 147 aaKnown RBP11.72□□□□□ -0.53
PRKCSH-211ENST00000590098 H2AFB1P0C5Y9 115 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms