RNA–Protein interactions for RNA: ENST00000585953.5

RPRD1A-204, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 2,357 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-204ENST00000585953 LINC00474Q9P2X8 69 aa0.46□□□□□ -2.34
RPRD1A-204ENST00000585953 C8GP07360 202 aa0.45□□□□□ -2.34
RPRD1A-204ENST00000585953 CBLN1P23435 193 aa0.45□□□□□ -2.34
RPRD1A-204ENST00000585953 SDC4P31431 198 aa0.45□□□□□ -2.34
RPRD1A-204ENST00000585953 MAXP61244 160 aa0.45□□□□□ -2.34
RPRD1A-204ENST00000585953 IFITM2Q01629 132 aa0.45□□□□□ -2.34
RPRD1A-204ENST00000585953 SNCBQ16143 134 aa0.45□□□□□ -2.34
RPRD1A-204ENST00000585953 RTL8BQ17RB0 113 aa0.45□□□□□ -2.34
RPRD1A-204ENST00000585953 Q6ZS49 121 aa0.45□□□□□ -2.34
RPRD1A-204ENST00000585953 C3orf62Q6ZUJ4 267 aa0.45□□□□□ -2.34
RPRD1A-204ENST00000585953 LEAP2Q969E1 77 aa0.45□□□□□ -2.34
RPRD1A-204ENST00000585953 TMEM133Q9H2Q1 129 aa0.45□□□□□ -2.34
RPRD1A-204ENST00000585953 NKIRAS1Q9NYS0 192 aa0.45□□□□□ -2.34
RPRD1A-204ENST00000585953 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.45□□□□□ -2.34
RPRD1A-204ENST00000585953 IGKV1-9A0A0C4DH69 117 aa0.45□□□□□ -2.34
RPRD1A-204ENST00000585953 FAM223BA6NKX1 122 aa0.45□□□□□ -2.34
RPRD1A-204ENST00000585953 FAAHO00519 579 aa0.45□□□□□ -2.34
RPRD1A-204ENST00000585953 OR5F1O95221 314 aa0.45□□□□□ -2.34
RPRD1A-204ENST00000585953 IGKV1-5P01602 117 aa0.45□□□□□ -2.34
RPRD1A-204ENST00000585953 GYPAP02724 150 aa0.45□□□□□ -2.34
RPRD1A-204ENST00000585953 HTR1AP08908 422 aa0.45□□□□□ -2.34
RPRD1A-204ENST00000585953 HIST1H2BOP23527 126 aa0.45□□□□□ -2.34
RPRD1A-204ENST00000585953 HIST1H2BBP33778 126 aa0.45□□□□□ -2.34
RPRD1A-204ENST00000585953 AP2S1P53680 142 aaPredicted RBP0.45□□□□□ -2.34
RPRD1A-204ENST00000585953 HIST1H2BDP58876 126 aa0.45□□□□□ -2.34
RPRD1A-204ENST00000585953 HIST1H2BCP62807 126 aa0.45□□□□□ -2.34
RPRD1A-204ENST00000585953 HIST2H2BEQ16778 126 aa0.45□□□□□ -2.34
RPRD1A-204ENST00000585953 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.45□□□□□ -2.34
RPRD1A-204ENST00000585953 Q6ZQT0 140 aa0.45□□□□□ -2.34
RPRD1A-204ENST00000585953 ZNF826PQ6ZT77 177 aa0.45□□□□□ -2.34
RPRD1A-204ENST00000585953 KRTAP19-3Q7Z4W3 81 aa0.45□□□□□ -2.34
RPRD1A-204ENST00000585953 FAM223AQ8IWN6 122 aa0.45□□□□□ -2.34
RPRD1A-204ENST00000585953 PFN4Q8NHR9 129 aa0.45□□□□□ -2.34
RPRD1A-204ENST00000585953 HIST1H2BHQ93079 126 aa0.45□□□□□ -2.34
RPRD1A-204ENST00000585953 GAFA1Q96PS6 74 aa0.45□□□□□ -2.34
RPRD1A-204ENST00000585953 HIST1H2BNQ99877 126 aa0.45□□□□□ -2.34
RPRD1A-204ENST00000585953 HIST1H2BMQ99879 126 aa0.45□□□□□ -2.34
RPRD1A-204ENST00000585953 TLNRD1Q9H1K6 362 aa0.45□□□□□ -2.34
RPRD1A-204ENST00000585953 RASL12Q9NYN1 266 aa0.45□□□□□ -2.34
RPRD1A-204ENST00000585953 CKLFQ9UBR5 152 aa0.45□□□□□ -2.34
RPRD1A-204ENST00000585953 UFC1Q9Y3C8 167 aa0.45□□□□□ -2.34
RPRD1A-204ENST00000585953 NUBP2Q9Y5Y2 271 aa0.45□□□□□ -2.34
RPRD1A-204ENST00000585953 IGKV1D-42A0A075B6H8 117 aa0.44□□□□□ -2.34
RPRD1A-204ENST00000585953 FUOMA2VDF0 154 aa0.44□□□□□ -2.34
RPRD1A-204ENST00000585953 DCTN3O75935 186 aa0.44□□□□□ -2.34
RPRD1A-204ENST00000585953 CTSDP07339 412 aaPredicted RBP0.44□□□□□ -2.34
RPRD1A-204ENST00000585953 OR5G3P0C626 314 aa0.44□□□□□ -2.34
RPRD1A-204ENST00000585953 KDELR1P24390 212 aa0.44□□□□□ -2.34
RPRD1A-204ENST00000585953 CASP1P29466 404 aa0.44□□□□□ -2.34
RPRD1A-204ENST00000585953 KLK9Q2XQG4 91 aa0.44□□□□□ -2.34
RPRD1A-204ENST00000585953 RPL22L1Q6P5R6 122 aaKnown RBP0.44□□□□□ -2.34
RPRD1A-204ENST00000585953 IQCF2Q8IXL9 164 aa0.44□□□□□ -2.34
RPRD1A-204ENST00000585953 LINC00471Q8N535 108 aa0.44□□□□□ -2.34
RPRD1A-204ENST00000585953 MCFD2Q8NI22 146 aa0.44□□□□□ -2.34
RPRD1A-204ENST00000585953 MRPL30Q8TCC3 161 aaKnown RBP0.44□□□□□ -2.34
RPRD1A-204ENST00000585953 H1FXQ92522 213 aaKnown RBP0.44□□□□□ -2.34
RPRD1A-204ENST00000585953 PTH2Q96A98 100 aa0.44□□□□□ -2.34
RPRD1A-204ENST00000585953 SCGB3A1Q96QR1 104 aa0.44□□□□□ -2.34
RPRD1A-204ENST00000585953 CMTM6Q9NX76 183 aa0.44□□□□□ -2.34
RPRD1A-204ENST00000585953 KLK9Q9UKQ9 250 aa0.44□□□□□ -2.34
RPRD1A-204ENST00000585953 NDUFAF1Q9Y375 327 aa0.44□□□□□ -2.34
RPRD1A-204ENST00000585953 LSM5Q9Y4Y9 91 aaKnown RBP0.44□□□□□ -2.34
RPRD1A-204ENST00000585953 A0A096LPI6 279 aa0.43□□□□□ -2.34
RPRD1A-204ENST00000585953 GGCTO75223 188 aaKnown RBP0.43□□□□□ -2.34
RPRD1A-204ENST00000585953 PITX3O75364 302 aa0.43□□□□□ -2.34
RPRD1A-204ENST00000585953 CST7O76096 145 aa0.43□□□□□ -2.34
RPRD1A-204ENST00000585953 PROSCO94903 275 aa0.43□□□□□ -2.34
RPRD1A-204ENST00000585953 SRIP30626 198 aa0.43□□□□□ -2.34
RPRD1A-204ENST00000585953 SPANXN3Q5MJ09 141 aa0.43□□□□□ -2.34
RPRD1A-204ENST00000585953 HIST2H3PS2Q5TEC6 136 aa0.43□□□□□ -2.34
RPRD1A-204ENST00000585953 BPIFA4PQ86YQ2 179 aa0.43□□□□□ -2.34
RPRD1A-204ENST00000585953 TMEM35BQ8NCS4 154 aa0.43□□□□□ -2.34
RPRD1A-204ENST00000585953 OR4D11Q8NGI4 311 aa0.43□□□□□ -2.34
RPRD1A-204ENST00000585953 SLC35B4Q969S0 331 aa0.43□□□□□ -2.34
RPRD1A-204ENST00000585953 MRPL57Q9BQC6 102 aaKnown RBP0.43□□□□□ -2.34
RPRD1A-204ENST00000585953 OR2J1Q9GZK6 312 aa0.43□□□□□ -2.34
RPRD1A-204ENST00000585953 SYNE1Q8NF91 8797 aaKnown RBP0.43□□□□□ -2.34
RPRD1A-204ENST00000585953 A0A087WX48 190 aa0.43□□□□□ -2.34
RPRD1A-204ENST00000585953 SMIM23A6NLE4 172 aa0.43□□□□□ -2.34
RPRD1A-204ENST00000585953 BUB1B-PAK6H3BSN5 160 aa0.43□□□□□ -2.34
RPRD1A-204ENST00000585953 NDUFA4O00483 81 aa0.43□□□□□ -2.34
RPRD1A-204ENST00000585953 IFNA7P01567 189 aa0.43□□□□□ -2.34
RPRD1A-204ENST00000585953 HTN3P15516 51 aa0.43□□□□□ -2.34
RPRD1A-204ENST00000585953 TPPP2P59282 170 aa0.43□□□□□ -2.34
RPRD1A-204ENST00000585953 PCBD1P61457 104 aa0.43□□□□□ -2.34
RPRD1A-204ENST00000585953 ERVS71-1P61550 626 aa0.43□□□□□ -2.34
RPRD1A-204ENST00000585953 PPP1R2P3Q6NXS1 205 aa0.43□□□□□ -2.34
RPRD1A-204ENST00000585953 OR13C4Q8NGS5 318 aa0.43□□□□□ -2.34
RPRD1A-204ENST00000585953 LINC00526Q96FQ7 95 aa0.43□□□□□ -2.34
RPRD1A-204ENST00000585953 SLC50A1Q9BRV3 221 aa0.43□□□□□ -2.34
RPRD1A-204ENST00000585953 HILPDAQ9Y5L2 63 aa0.43□□□□□ -2.34
RPRD1A-204ENST00000585953 LOC110117498A0A087WWA1 95 aa0.42□□□□□ -2.34
RPRD1A-204ENST00000585953 A0A096LPF7 62 aa0.42□□□□□ -2.34
RPRD1A-204ENST00000585953 CALB1P05937 261 aa0.42□□□□□ -2.34
RPRD1A-204ENST00000585953 ASAH2BP0C7U1 165 aa0.42□□□□□ -2.34
RPRD1A-204ENST00000585953 SPI1P17947 270 aa0.42□□□□□ -2.34
RPRD1A-204ENST00000585953 PHBP35232 272 aa0.42□□□□□ -2.34
RPRD1A-204ENST00000585953 AESQ08117 197 aa0.42□□□□□ -2.34
RPRD1A-204ENST00000585953 COTL1Q14019 142 aa0.42□□□□□ -2.34
RPRD1A-204ENST00000585953 OR52R1Q8NGF1 315 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms