RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 TENM3Q9P273 2699 aa11.92□□□□□ -0.5
CDK5RAP3-230ENST00000584042 FBN3Q75N90 2809 aa11.91□□□□□ -0.5
CDK5RAP3-230ENST00000584042 GAGE12BA1L429 117 aa11.91□□□□□ -0.5
CDK5RAP3-230ENST00000584042 GAGE7O76087 117 aa11.91□□□□□ -0.5
CDK5RAP3-230ENST00000584042 GAGE12FP0CL80 117 aa11.91□□□□□ -0.5
CDK5RAP3-230ENST00000584042 GAGE12GP0CL81 117 aa11.91□□□□□ -0.5
CDK5RAP3-230ENST00000584042 GAGE12IP0CL82 117 aa11.91□□□□□ -0.5
CDK5RAP3-230ENST00000584042 SPART-AS1P0CW21 52 aa11.91□□□□□ -0.5
CDK5RAP3-230ENST00000584042 SMIM17P0DL12 118 aa11.91□□□□□ -0.5
CDK5RAP3-230ENST00000584042 CFAP126Q5VTH2 177 aa11.91□□□□□ -0.5
CDK5RAP3-230ENST00000584042 CELA1Q9UNI1 258 aa11.91□□□□□ -0.5
CDK5RAP3-230ENST00000584042 KIF25-AS1Q9Y6Z4 181 aa11.91□□□□□ -0.5
CDK5RAP3-230ENST00000584042 TRGV2A0A075B6R0 118 aa11.9□□□□□ -0.5
CDK5RAP3-230ENST00000584042 A0A0J9YWU9 116 aa11.9□□□□□ -0.5
CDK5RAP3-230ENST00000584042 CRYGDP07320 174 aa11.9□□□□□ -0.5
CDK5RAP3-230ENST00000584042 FAM104BQ5XKR9 115 aa11.9□□□□□ -0.5
CDK5RAP3-230ENST00000584042 ZFP2Q6ZN57 461 aa11.9□□□□□ -0.5
CDK5RAP3-230ENST00000584042 C14orf178Q8N769 122 aaPredicted RBP11.9□□□□□ -0.5
CDK5RAP3-230ENST00000584042 JPT2Q9H910 190 aa11.9□□□□□ -0.5
CDK5RAP3-230ENST00000584042 A0A087WWL8 130 aa11.89□□□□□ -0.51
CDK5RAP3-230ENST00000584042 CIDEAO60543 219 aa11.89□□□□□ -0.51
CDK5RAP3-230ENST00000584042 FAM74A4Q5TZK3 123 aa11.89□□□□□ -0.51
CDK5RAP3-230ENST00000584042 UFSP1Q6NVU6 142 aa11.89□□□□□ -0.51
CDK5RAP3-230ENST00000584042 AMN1Q8IY45 258 aa11.89□□□□□ -0.51
CDK5RAP3-230ENST00000584042 POM121L12Q8N7R1 296 aa11.89□□□□□ -0.51
CDK5RAP3-230ENST00000584042 SAMD10Q9BYL1 202 aa11.89□□□□□ -0.51
CDK5RAP3-230ENST00000584042 DEFB130BP0DP73 79 aa11.88□□□□□ -0.51
CDK5RAP3-230ENST00000584042 DEFB130AP0DP74 79 aa11.88□□□□□ -0.51
CDK5RAP3-230ENST00000584042 RPS10P46783 165 aaKnown RBP11.88□□□□□ -0.51
CDK5RAP3-230ENST00000584042 LINC00315P59091 139 aa11.88□□□□□ -0.51
CDK5RAP3-230ENST00000584042 DAD1P61803 113 aa11.88□□□□□ -0.51
CDK5RAP3-230ENST00000584042 SLAQ13239 276 aa11.88□□□□□ -0.51
CDK5RAP3-230ENST00000584042 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-230ENST00000584042 OR4C5Q8NGB2 326 aa11.88□□□□□ -0.51
CDK5RAP3-230ENST00000584042 FRZBQ92765 325 aa11.88□□□□□ -0.51
CDK5RAP3-230ENST00000584042 RNF185Q96GF1 192 aa11.88□□□□□ -0.51
CDK5RAP3-230ENST00000584042 MRPL18Q9H0U6 180 aaKnown RBP11.88□□□□□ -0.51
CDK5RAP3-230ENST00000584042 TRAPPC1Q9Y5R8 145 aa11.88□□□□□ -0.51
CDK5RAP3-230ENST00000584042 MGPP08493 103 aa11.87□□□□□ -0.51
CDK5RAP3-230ENST00000584042 EDA2RQ9HAV5 297 aa11.87□□□□□ -0.51
CDK5RAP3-230ENST00000584042 APCSP02743 223 aa11.86□□□□□ -0.51
CDK5RAP3-230ENST00000584042 RAB4AP20338 218 aa11.86□□□□□ -0.51
CDK5RAP3-230ENST00000584042 ZNF56Q15929 161 aa11.86□□□□□ -0.51
CDK5RAP3-230ENST00000584042 MRAP2Q96G30 205 aa11.86□□□□□ -0.51
CDK5RAP3-230ENST00000584042 ZNF479Q96JC4 524 aa11.86□□□□□ -0.51
CDK5RAP3-230ENST00000584042 MRPL51Q4U2R6 128 aaKnown RBP11.85□□□□□ -0.51
CDK5RAP3-230ENST00000584042 IGHV3-53P01767 116 aa11.84□□□□□ -0.51
CDK5RAP3-230ENST00000584042 PPBPP02775 128 aa11.84□□□□□ -0.51
CDK5RAP3-230ENST00000584042 ATP5G1P05496 136 aa11.84□□□□□ -0.51
CDK5RAP3-230ENST00000584042 FABP9Q0Z7S8 132 aa11.84□□□□□ -0.51
CDK5RAP3-230ENST00000584042 C12orf74Q32Q52 190 aa11.84□□□□□ -0.51
CDK5RAP3-230ENST00000584042 SUMO4Q6EEV6 95 aa11.84□□□□□ -0.51
CDK5RAP3-230ENST00000584042 TRGC2P03986 189 aa11.83□□□□□ -0.52
CDK5RAP3-230ENST00000584042 ORMDL3Q8N138 153 aa11.83□□□□□ -0.52
CDK5RAP3-230ENST00000584042 C11orf45Q8TAV5 145 aa11.83□□□□□ -0.52
CDK5RAP3-230ENST00000584042 IGHV3-73A0A0B4J1V6 119 aa11.82□□□□□ -0.52
CDK5RAP3-230ENST00000584042 D6R8Y8 96 aa11.82□□□□□ -0.52
CDK5RAP3-230ENST00000584042 F5H697 171 aa11.82□□□□□ -0.52
CDK5RAP3-230ENST00000584042 H7C1H1 209 aa11.82□□□□□ -0.52
CDK5RAP3-230ENST00000584042 PHOX2AO14813 284 aa11.82□□□□□ -0.52
CDK5RAP3-230ENST00000584042 GATA1P15976 413 aaPredicted RBP11.82□□□□□ -0.52
CDK5RAP3-230ENST00000584042 U3KQK5 164 aa11.82□□□□□ -0.52
CDK5RAP3-230ENST00000584042 COL7A1Q02388 2944 aa11.81□□□□□ -0.52
CDK5RAP3-230ENST00000584042 TRGV4A0A0C4DH28 118 aa11.81□□□□□ -0.52
CDK5RAP3-230ENST00000584042 CKS2P33552 79 aa11.81□□□□□ -0.52
CDK5RAP3-230ENST00000584042 FHL2Q14192 279 aa11.81□□□□□ -0.52
CDK5RAP3-230ENST00000584042 LAMTOR2Q9Y2Q5 125 aa11.81□□□□□ -0.52
CDK5RAP3-230ENST00000584042 TRAV26-2A0A0B4J265 109 aa11.8□□□□□ -0.52
CDK5RAP3-230ENST00000584042 K7EQD1 137 aa11.8□□□□□ -0.52
CDK5RAP3-230ENST00000584042 M0QY20 66 aa11.8□□□□□ -0.52
CDK5RAP3-230ENST00000584042 NCR2O95944 276 aa11.8□□□□□ -0.52
CDK5RAP3-230ENST00000584042 KIAA1644Q3SXP7 199 aa11.8□□□□□ -0.52
CDK5RAP3-230ENST00000584042 TRBV10-1A0A0K0K1A3 114 aa11.79□□□□□ -0.52
CDK5RAP3-230ENST00000584042 TRBV6-4A0A1B0GX49 114 aa11.79□□□□□ -0.52
CDK5RAP3-230ENST00000584042 PPP1R17O96001 155 aa11.79□□□□□ -0.52
CDK5RAP3-230ENST00000584042 RHOHQ15669 191 aa11.79□□□□□ -0.52
CDK5RAP3-230ENST00000584042 Q6ZTC4 211 aa11.79□□□□□ -0.52
CDK5RAP3-230ENST00000584042 SMKR1H3BMG3 65 aa11.78□□□□□ -0.52
CDK5RAP3-230ENST00000584042 HOXA5P20719 270 aa11.78□□□□□ -0.52
CDK5RAP3-230ENST00000584042 SRIP30626 198 aa11.78□□□□□ -0.52
CDK5RAP3-230ENST00000584042 NANOS2P60321 138 aaKnown RBP11.78□□□□□ -0.52
CDK5RAP3-230ENST00000584042 Q6ZSN1 163 aa11.78□□□□□ -0.52
CDK5RAP3-230ENST00000584042 NRACQ8N912 160 aa11.78□□□□□ -0.52
CDK5RAP3-230ENST00000584042 PRELID3AQ96N28 172 aa11.78□□□□□ -0.52
CDK5RAP3-230ENST00000584042 ALKBH7Q9BT30 221 aaPredicted RBP11.78□□□□□ -0.52
CDK5RAP3-230ENST00000584042 PRO0255Q9UI72 69 aa11.78□□□□□ -0.52
CDK5RAP3-230ENST00000584042 STAB2Q8WWQ8 2551 aa11.78□□□□□ -0.52
CDK5RAP3-230ENST00000584042 C1orf196B1AJZ1 125 aa11.77□□□□□ -0.53
CDK5RAP3-230ENST00000584042 NPYP01303 97 aa11.77□□□□□ -0.53
CDK5RAP3-230ENST00000584042 SLC25A29Q8N8R3 303 aa11.77□□□□□ -0.53
CDK5RAP3-230ENST00000584042 TRBV6-5A0A0K0K1A5 114 aa11.76□□□□□ -0.53
CDK5RAP3-230ENST00000584042 GAS8-AS1O95177 125 aa11.76□□□□□ -0.53
CDK5RAP3-230ENST00000584042 TNFRSF6BO95407 300 aa11.76□□□□□ -0.53
CDK5RAP3-230ENST00000584042 CRYBA4P53673 196 aa11.76□□□□□ -0.53
CDK5RAP3-230ENST00000584042 OR10J3Q5JRS4 329 aa11.76□□□□□ -0.53
CDK5RAP3-230ENST00000584042 RPL39LQ96EH5 51 aaKnown RBP11.76□□□□□ -0.53
CDK5RAP3-230ENST00000584042 DNAJC30Q96LL9 226 aa11.76□□□□□ -0.53
CDK5RAP3-230ENST00000584042 PRADC1Q9BSG0 188 aa11.76□□□□□ -0.53
CDK5RAP3-230ENST00000584042 NIT2Q9NQR4 276 aa11.76□□□□□ -0.53
CDK5RAP3-230ENST00000584042 TRAV10A0A0B4J240 114 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms