RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 TRIM63Q969Q1 353 aa6.95□□□□□ -1.3
CASC3-208ENST00000583649 PRR34Q9NV39 138 aa6.95□□□□□ -1.3
CASC3-208ENST00000583649 Q9UF83 564 aa6.95□□□□□ -1.3
CASC3-208ENST00000583649 LPAP08519 4548 aa6.95□□□□□ -1.3
CASC3-208ENST00000583649 IGLV10-54A0A075B6I4 117 aa6.94□□□□□ -1.3
CASC3-208ENST00000583649 IGKV2-24A0A0C4DH68 120 aa6.94□□□□□ -1.3
CASC3-208ENST00000583649 CENPXA8MT69 81 aa6.94□□□□□ -1.3
CASC3-208ENST00000583649 CCSO14618 274 aa6.94□□□□□ -1.3
CASC3-208ENST00000583649 CACNG7P62955 275 aa6.94□□□□□ -1.3
CASC3-208ENST00000583649 COX6A2Q02221 97 aa6.94□□□□□ -1.3
CASC3-208ENST00000583649 SAPCD1Q5SSQ6 148 aa6.94□□□□□ -1.3
CASC3-208ENST00000583649 UFSP1Q6NVU6 142 aa6.94□□□□□ -1.3
CASC3-208ENST00000583649 THAP6Q8TBB0 222 aa6.94□□□□□ -1.3
CASC3-208ENST00000583649 TVP23CQ96ET8 276 aa6.94□□□□□ -1.3
CASC3-208ENST00000583649 IL36BQ9NZH7 164 aa6.94□□□□□ -1.3
CASC3-208ENST00000583649 TRAV6A0A075B6T7 132 aa6.93□□□□□ -1.3
CASC3-208ENST00000583649 CLPSL2Q6UWE3 100 aa6.93□□□□□ -1.3
CASC3-208ENST00000583649 PHLDA3Q9Y5J5 127 aa6.93□□□□□ -1.3
CASC3-208ENST00000583649 IGSF23A1L1A6 192 aa6.92□□□□□ -1.3
CASC3-208ENST00000583649 NOL3O60936 208 aaKnown RBP6.92□□□□□ -1.3
CASC3-208ENST00000583649 S100A5P33763 92 aa6.92□□□□□ -1.3
CASC3-208ENST00000583649 RPS10P46783 165 aaKnown RBP6.92□□□□□ -1.3
CASC3-208ENST00000583649 REG3AQ06141 175 aa6.92□□□□□ -1.3
CASC3-208ENST00000583649 SRSF9Q13242 221 aaKnown RBP eCLIP6.92□□□□□ -1.3
CASC3-208ENST00000583649 SPCS2Q15005 226 aa6.92□□□□□ -1.3
CASC3-208ENST00000583649 PRR4Q16378 134 aa6.92□□□□□ -1.3
CASC3-208ENST00000583649 PQLC2Q6ZP29 291 aa6.92□□□□□ -1.3
CASC3-208ENST00000583649 C11orf21Q9P2W6 132 aa6.92□□□□□ -1.3
CASC3-208ENST00000583649 TRBV25-1A0A075B6N4 114 aa6.91□□□□□ -1.3
CASC3-208ENST00000583649 A0A1W2PPV4 95 aa6.91□□□□□ -1.3
CASC3-208ENST00000583649 FABP5P3A8MUU1 101 aa6.91□□□□□ -1.3
CASC3-208ENST00000583649 ZNF80P51504 273 aaPredicted RBP6.91□□□□□ -1.3
CASC3-208ENST00000583649 OR10G8Q8NGN5 311 aa6.91□□□□□ -1.3
CASC3-208ENST00000583649 OR5C1Q8NGR4 320 aa6.91□□□□□ -1.3
CASC3-208ENST00000583649 JPT2Q9H910 190 aa6.91□□□□□ -1.3
CASC3-208ENST00000583649 FLVCR2Q9UPI3 526 aa6.91□□□□□ -1.3
CASC3-208ENST00000583649 PSG8Q9UQ74 426 aa6.91□□□□□ -1.3
CASC3-208ENST00000583649 FAT4Q6V0I7 4981 aa6.91□□□□□ -1.3
CASC3-208ENST00000583649 TPT1P13693 172 aaKnown RBP6.9□□□□□ -1.3
CASC3-208ENST00000583649 RBX1P62877 108 aa6.9□□□□□ -1.3
CASC3-208ENST00000583649 LCE2AQ5TA79 106 aaPredicted RBP6.9□□□□□ -1.3
CASC3-208ENST00000583649 TRIQKQ629K1 86 aa6.9□□□□□ -1.3
CASC3-208ENST00000583649 C5orf17Q8NAS9 161 aa6.9□□□□□ -1.3
CASC3-208ENST00000583649 SFRP2Q96HF1 295 aa6.9□□□□□ -1.3
CASC3-208ENST00000583649 SGK494Q96LW2 274 aa6.9□□□□□ -1.3
CASC3-208ENST00000583649 WDR61Q9GZS3 305 aaKnown RBP6.9□□□□□ -1.3
CASC3-208ENST00000583649 B4DEV8 164 aa6.89□□□□□ -1.31
CASC3-208ENST00000583649 H3BVH4 76 aa6.89□□□□□ -1.31
CASC3-208ENST00000583649 RAB4BP61018 213 aa6.89□□□□□ -1.31
CASC3-208ENST00000583649 GNG5P63218 68 aa6.89□□□□□ -1.31
CASC3-208ENST00000583649 FLI1Q01543 452 aaPredicted RBP6.89□□□□□ -1.31
CASC3-208ENST00000583649 KRTAP26-1Q6PEX3 210 aa6.89□□□□□ -1.31
CASC3-208ENST00000583649 PRNTQ86SH4 94 aa6.89□□□□□ -1.31
CASC3-208ENST00000583649 ZFP82Q8N141 532 aa6.89□□□□□ -1.31
CASC3-208ENST00000583649 SCGB1C1Q8TD33 95 aa6.89□□□□□ -1.31
CASC3-208ENST00000583649 C11orf1Q9H5F2 150 aa6.89□□□□□ -1.31
CASC3-208ENST00000583649 IGKV3D-20A0A0C4DH25 116 aa6.88□□□□□ -1.31
CASC3-208ENST00000583649 M0R381 172 aa6.88□□□□□ -1.31
CASC3-208ENST00000583649 TCRAP04437 139 aa6.88□□□□□ -1.31
CASC3-208ENST00000583649 ARMS2P0C7Q2 107 aa6.88□□□□□ -1.31
CASC3-208ENST00000583649 GAGE6Q13070 117 aa6.88□□□□□ -1.31
CASC3-208ENST00000583649 DERL1Q9BUN8 251 aa6.88□□□□□ -1.31
CASC3-208ENST00000583649 SLPIP03973 132 aa6.87□□□□□ -1.31
CASC3-208ENST00000583649 TMBIM6P55061 237 aa6.87□□□□□ -1.31
CASC3-208ENST00000583649 RAB2AP61019 212 aa6.87□□□□□ -1.31
CASC3-208ENST00000583649 NHLH2Q02577 135 aa6.87□□□□□ -1.31
CASC3-208ENST00000583649 RAB32Q13637 225 aa6.87□□□□□ -1.31
CASC3-208ENST00000583649 ZNF56Q15929 161 aa6.87□□□□□ -1.31
CASC3-208ENST00000583649 PRSS3P2Q8NHM4 247 aa6.87□□□□□ -1.31
CASC3-208ENST00000583649 IGHV1-24A0A0C4DH33 117 aa6.86□□□□□ -1.31
CASC3-208ENST00000583649 A6NHS1 94 aa6.86□□□□□ -1.31
CASC3-208ENST00000583649 H3BMQ9 156 aa6.86□□□□□ -1.31
CASC3-208ENST00000583649 SULT1A2P50226 295 aa6.86□□□□□ -1.31
CASC3-208ENST00000583649 RAB5CP51148 216 aa6.86□□□□□ -1.31
CASC3-208ENST00000583649 DNLZQ5SXM8 178 aa6.86□□□□□ -1.31
CASC3-208ENST00000583649 FER1L6-AS1Q8NA97 138 aa6.85□□□□□ -1.31
CASC3-208ENST00000583649 NEXN-AS1Q8NBZ9 246 aa6.85□□□□□ -1.31
CASC3-208ENST00000583649 V9GYH0 126 aa6.85□□□□□ -1.31
CASC3-208ENST00000583649 TRAV1-1A0A0B4J248 108 aa6.84□□□□□ -1.31
CASC3-208ENST00000583649 MUC21A0A0G2JKD1 596 aa6.84□□□□□ -1.31
CASC3-208ENST00000583649 TRBV6-1A0A0K0K1D8 114 aa6.84□□□□□ -1.31
CASC3-208ENST00000583649 F5H697 171 aa6.84□□□□□ -1.31
CASC3-208ENST00000583649 MT-ND6P03923 174 aa6.84□□□□□ -1.31
CASC3-208ENST00000583649 DIRC1Q969H9 104 aa6.84□□□□□ -1.31
CASC3-208ENST00000583649 EPDR1Q9UM22 224 aa6.84□□□□□ -1.31
CASC3-208ENST00000583649 A0A096LNI7 61 aa6.83□□□□□ -1.32
CASC3-208ENST00000583649 A0A1B0GUV1 79 aa6.83□□□□□ -1.32
CASC3-208ENST00000583649 UBE2L6O14933 153 aa6.83□□□□□ -1.32
CASC3-208ENST00000583649 UBE2D1P51668 147 aa6.83□□□□□ -1.32
CASC3-208ENST00000583649 IQCJQ1A5X6 159 aa6.83□□□□□ -1.32
CASC3-208ENST00000583649 AQP10Q96PS8 301 aa6.83□□□□□ -1.32
CASC3-208ENST00000583649 RBM38Q9H0Z9 239 aaKnown RBP6.83□□□□□ -1.32
CASC3-208ENST00000583649 IGLV1-50A0A075B6I6 118 aa6.82□□□□□ -1.32
CASC3-208ENST00000583649 KRBOX1C9JBD0 128 aa6.82□□□□□ -1.32
CASC3-208ENST00000583649 M0R036 132 aa6.82□□□□□ -1.32
CASC3-208ENST00000583649 SMIM17P0DL12 118 aa6.82□□□□□ -1.32
CASC3-208ENST00000583649 RPL13AP40429 203 aaKnown RBP6.82□□□□□ -1.32
CASC3-208ENST00000583649 SUMO1P63165 101 aaKnown RBP6.82□□□□□ -1.32
CASC3-208ENST00000583649 HIGD2BQ4VC39 106 aa6.82□□□□□ -1.32
CASC3-208ENST00000583649 PRR26Q8N8Z3 221 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms