RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 SMIM7Q9BQ49 75 aa2.63□□□□□ -1.99
SMARCE1-215ENST00000578995 SPXQ9BT56 116 aa2.63□□□□□ -1.99
SMARCE1-215ENST00000578995 TMEM208Q9BTX3 173 aa2.63□□□□□ -1.99
SMARCE1-215ENST00000578995 NDUFAF3Q9BU61 184 aa2.63□□□□□ -1.99
SMARCE1-215ENST00000578995 RNASE7Q9H1E1 156 aaKnown RBP2.63□□□□□ -1.99
SMARCE1-215ENST00000578995 JPT2Q9H910 190 aa2.63□□□□□ -1.99
SMARCE1-215ENST00000578995 Q9UF83 564 aa2.63□□□□□ -1.99
SMARCE1-215ENST00000578995 NAGKQ9UJ70 344 aa2.63□□□□□ -1.99
SMARCE1-215ENST00000578995 V9GYV3 84 aa2.63□□□□□ -1.99
SMARCE1-215ENST00000578995 EPPK1P58107 5090 aaKnown RBP2.63□□□□□ -1.99
SMARCE1-215ENST00000578995 TMSB15BA0A087X1C1 80 aa2.62□□□□□ -1.99
SMARCE1-215ENST00000578995 DEFB131BA0A096LNP1 70 aa2.62□□□□□ -1.99
SMARCE1-215ENST00000578995 TRAV10A0A0B4J240 114 aa2.62□□□□□ -1.99
SMARCE1-215ENST00000578995 TRAV4A0A0B4J268 109 aa2.62□□□□□ -1.99
SMARCE1-215ENST00000578995 GAGE12BA1L429 117 aa2.62□□□□□ -1.99
SMARCE1-215ENST00000578995 NUPR2A6NF83 97 aa2.62□□□□□ -1.99
SMARCE1-215ENST00000578995 ZNF727A8MUV8 499 aa2.62□□□□□ -1.99
SMARCE1-215ENST00000578995 SNURFLB1AK76 121 aa2.62□□□□□ -1.99
SMARCE1-215ENST00000578995 H3BNG1 76 aa2.62□□□□□ -1.99
SMARCE1-215ENST00000578995 M0R2P5 195 aa2.62□□□□□ -1.99
SMARCE1-215ENST00000578995 GAGE7O76087 117 aa2.62□□□□□ -1.99
SMARCE1-215ENST00000578995 IGKV2-30P06310 120 aa2.62□□□□□ -1.99
SMARCE1-215ENST00000578995 CRYGDP07320 174 aa2.62□□□□□ -1.99
SMARCE1-215ENST00000578995 SFTA3P0C7M3 94 aa2.62□□□□□ -1.99
SMARCE1-215ENST00000578995 GAGE12FP0CL80 117 aa2.62□□□□□ -1.99
SMARCE1-215ENST00000578995 GAGE12GP0CL81 117 aa2.62□□□□□ -1.99
SMARCE1-215ENST00000578995 GAGE12IP0CL82 117 aa2.62□□□□□ -1.99
SMARCE1-215ENST00000578995 DEFB130BP0DP73 79 aa2.62□□□□□ -1.99
SMARCE1-215ENST00000578995 DEFB130AP0DP74 79 aa2.62□□□□□ -1.99
SMARCE1-215ENST00000578995 GATA1P15976 413 aaPredicted RBP2.62□□□□□ -1.99
SMARCE1-215ENST00000578995 FOXA3P55318 350 aaPredicted RBP2.62□□□□□ -1.99
SMARCE1-215ENST00000578995 DAD1P61803 113 aa2.62□□□□□ -1.99
SMARCE1-215ENST00000578995 FAM74A3Q4VXF1 159 aa2.62□□□□□ -1.99
SMARCE1-215ENST00000578995 CT83Q5H943 113 aa2.62□□□□□ -1.99
SMARCE1-215ENST00000578995 CFAP126Q5VTH2 177 aa2.62□□□□□ -1.99
SMARCE1-215ENST00000578995 PRR27Q6MZM9 219 aa2.62□□□□□ -1.99
SMARCE1-215ENST00000578995 TMEM88Q6PEY1 159 aa2.62□□□□□ -1.99
SMARCE1-215ENST00000578995 LINC00476Q8WZB0 136 aa2.62□□□□□ -1.99
SMARCE1-215ENST00000578995 SFRP2Q96HF1 295 aa2.62□□□□□ -1.99
SMARCE1-215ENST00000578995 SAMD10Q9BYL1 202 aa2.62□□□□□ -1.99
SMARCE1-215ENST00000578995 EIF5A2Q9GZV4 153 aaKnown RBP2.62□□□□□ -1.99
SMARCE1-215ENST00000578995 RPP21Q9H633 154 aaKnown RBP2.62□□□□□ -1.99
SMARCE1-215ENST00000578995 OSTCQ9NRP0 149 aa2.62□□□□□ -1.99
SMARCE1-215ENST00000578995 MSRB1Q9NZV6 116 aa2.62□□□□□ -1.99
SMARCE1-215ENST00000578995 NAT8Q9UHE5 227 aa2.62□□□□□ -1.99
SMARCE1-215ENST00000578995 A0A096LPF7 62 aa2.61□□□□□ -1.99
SMARCE1-215ENST00000578995 TRGV1A0A0A0MS02 117 aa2.61□□□□□ -1.99
SMARCE1-215ENST00000578995 LCE6AA0A183 80 aa2.61□□□□□ -1.99
SMARCE1-215ENST00000578995 TMEM218A2RU14 115 aa2.61□□□□□ -1.99
SMARCE1-215ENST00000578995 ORM1P02763 201 aa2.61□□□□□ -1.99
SMARCE1-215ENST00000578995 ATP5G1P05496 136 aa2.61□□□□□ -1.99
SMARCE1-215ENST00000578995 MGST1P10620 155 aaKnown RBP2.61□□□□□ -1.99
SMARCE1-215ENST00000578995 ASIPP42127 132 aa2.61□□□□□ -1.99
SMARCE1-215ENST00000578995 CRYBA4P53673 196 aa2.61□□□□□ -1.99
SMARCE1-215ENST00000578995 PEA15Q15121 130 aa2.61□□□□□ -1.99
SMARCE1-215ENST00000578995 TMEM241Q24JQ0 296 aa2.61□□□□□ -1.99
SMARCE1-215ENST00000578995 ZNF876PQ49A33 203 aa2.61□□□□□ -1.99
SMARCE1-215ENST00000578995 UQCC3Q6UW78 93 aa2.61□□□□□ -1.99
SMARCE1-215ENST00000578995 COMMD7Q86VX2 200 aa2.61□□□□□ -1.99
SMARCE1-215ENST00000578995 GATD1Q8NB37 220 aa2.61□□□□□ -1.99
SMARCE1-215ENST00000578995 OR2D3Q8NGH3 330 aa2.61□□□□□ -1.99
SMARCE1-215ENST00000578995 FAM210BQ96KR6 192 aa2.61□□□□□ -1.99
SMARCE1-215ENST00000578995 CARHSP1Q9Y2V2 147 aaKnown RBP2.61□□□□□ -1.99
SMARCE1-215ENST00000578995 OBSCNQ5VST9 7968 aa2.61□□□□□ -1.99
SMARCE1-215ENST00000578995 DNAH5Q8TE73 4624 aa2.61□□□□□ -1.99
SMARCE1-215ENST00000578995 TRAV26-1A0A087WT03 109 aa2.6□□□□□ -1.99
SMARCE1-215ENST00000578995 MUC21A0A0G2JKD1 596 aa2.6□□□□□ -1.99
SMARCE1-215ENST00000578995 LOC100131303A0A0U1RQF7 123 aa2.6□□□□□ -1.99
SMARCE1-215ENST00000578995 MUC21A0A140T8X8 626 aa2.6□□□□□ -1.99
SMARCE1-215ENST00000578995 A0A1B0GXF2 115 aa2.6□□□□□ -1.99
SMARCE1-215ENST00000578995 SMIM27A0A1W2PRY6 76 aa2.6□□□□□ -1.99
SMARCE1-215ENST00000578995 FAM231BA6NCW3 169 aa2.6□□□□□ -1.99
SMARCE1-215ENST00000578995 KRTAP9-6A8MVA2 160 aa2.6□□□□□ -1.99
SMARCE1-215ENST00000578995 P01737 135 aa2.6□□□□□ -1.99
SMARCE1-215ENST00000578995 IGHV3-53P01767 116 aa2.6□□□□□ -1.99
SMARCE1-215ENST00000578995 GYPEP15421 78 aa2.6□□□□□ -1.99
SMARCE1-215ENST00000578995 CEBPGP53567 150 aa2.6□□□□□ -1.99
SMARCE1-215ENST00000578995 TCTAP57738 103 aa2.6□□□□□ -1.99
SMARCE1-215ENST00000578995 RPS20P60866 119 aaKnown RBP2.6□□□□□ -1.99
SMARCE1-215ENST00000578995 RAB14P61106 215 aa2.6□□□□□ -1.99
SMARCE1-215ENST00000578995 FOXI1Q12951 378 aa2.6□□□□□ -1.99
SMARCE1-215ENST00000578995 SOHLH1Q5JUK2 328 aa2.6□□□□□ -1.99
SMARCE1-215ENST00000578995 WDR73Q6P4I2 378 aa2.6□□□□□ -1.99
SMARCE1-215ENST00000578995 LYZL1Q6UWQ5 148 aa2.6□□□□□ -1.99
SMARCE1-215ENST00000578995 ZFP2Q6ZN57 461 aa2.6□□□□□ -1.99
SMARCE1-215ENST00000578995 C14orf178Q8N769 122 aaPredicted RBP2.6□□□□□ -1.99
SMARCE1-215ENST00000578995 SLC25A29Q8N8R3 303 aa2.6□□□□□ -1.99
SMARCE1-215ENST00000578995 FER1L6-AS1Q8NA97 138 aa2.6□□□□□ -1.99
SMARCE1-215ENST00000578995 TSKUQ8WUA8 353 aa2.6□□□□□ -1.99
SMARCE1-215ENST00000578995 SEC11CQ9BY50 192 aa2.6□□□□□ -1.99
SMARCE1-215ENST00000578995 GFRA4Q9GZZ7 299 aa2.6□□□□□ -1.99
SMARCE1-215ENST00000578995 CDIP1Q9H305 208 aa2.6□□□□□ -1.99
SMARCE1-215ENST00000578995 PRO0255Q9UI72 69 aa2.6□□□□□ -1.99
SMARCE1-215ENST00000578995 PKHD1P08F94 4074 aa2.6□□□□□ -1.99
SMARCE1-215ENST00000578995 HECTD4Q9Y4D8 3996 aa2.59□□□□□ -1.99
SMARCE1-215ENST00000578995 TRGV2A0A075B6R0 118 aa2.59□□□□□ -1.99
SMARCE1-215ENST00000578995 A0A087WWL8 130 aa2.59□□□□□ -1.99
SMARCE1-215ENST00000578995 A0A0J9YY99 117 aa2.59□□□□□ -1.99
SMARCE1-215ENST00000578995 TRBV6-4A0A1B0GX49 114 aa2.59□□□□□ -1.99
SMARCE1-215ENST00000578995 A0A1W2PPQ1 181 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms