RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 TRAV12-3A0A0B4J271 114 aa4.03□□□□□ -1.76
VAPA-203ENST00000577539 IGHG2P01859 326 aa4.03□□□□□ -1.76
VAPA-203ENST00000577539 SUMO2P61956 95 aaKnown RBP4.03□□□□□ -1.76
VAPA-203ENST00000577539 NRACQ8N912 160 aa4.03□□□□□ -1.76
VAPA-203ENST00000577539 CHAC1Q9BUX1 264 aa4.03□□□□□ -1.76
VAPA-203ENST00000577539 DPH3P1Q9H4G8 78 aa4.03□□□□□ -1.76
VAPA-203ENST00000577539 PRORYQ9H606 182 aa4.03□□□□□ -1.76
VAPA-203ENST00000577539 DAZ1Q9NQZ3 744 aaKnown RBP4.03□□□□□ -1.76
VAPA-203ENST00000577539 K7ERJ3 54 aa4.03□□□□□ -1.76
VAPA-203ENST00000577539 CD7P09564 240 aa4.03□□□□□ -1.76
VAPA-203ENST00000577539 SMIM13P0DJ93 91 aa4.03□□□□□ -1.76
VAPA-203ENST00000577539 HTN1P15515 57 aa4.03□□□□□ -1.76
VAPA-203ENST00000577539 SPCS1Q9Y6A9 102 aa4.03□□□□□ -1.76
VAPA-203ENST00000577539 CCDC168Q8NDH2 2452 aa4.02□□□□□ -1.77
VAPA-203ENST00000577539 ABCA12Q86UK0 2595 aa4.02□□□□□ -1.77
VAPA-203ENST00000577539 A6NDX4 124 aa4.02□□□□□ -1.77
VAPA-203ENST00000577539 H3BRM9 83 aa4.02□□□□□ -1.77
VAPA-203ENST00000577539 IGHV4-59P01825 116 aa4.02□□□□□ -1.77
VAPA-203ENST00000577539 NHLRC4P0CG21 123 aaPredicted RBP4.02□□□□□ -1.77
VAPA-203ENST00000577539 ID1P41134 155 aa4.02□□□□□ -1.77
VAPA-203ENST00000577539 FXYD2P54710 66 aa4.02□□□□□ -1.77
VAPA-203ENST00000577539 PSMG4Q5JS54 123 aa4.02□□□□□ -1.77
VAPA-203ENST00000577539 C10orf99Q6UWK7 81 aa4.02□□□□□ -1.77
VAPA-203ENST00000577539 GPHB5Q86YW7 130 aa4.02□□□□□ -1.77
VAPA-203ENST00000577539 SETD2Q9BYW2 2564 aaPredicted RBP4.02□□□□□ -1.77
VAPA-203ENST00000577539 WNK1Q9H4A3 2382 aa4.02□□□□□ -1.77
VAPA-203ENST00000577539 TRBV25-1A0A075B6N4 114 aa4.02□□□□□ -1.77
VAPA-203ENST00000577539 OR11H12B2RN74 326 aa4.02□□□□□ -1.77
VAPA-203ENST00000577539 B4DSR2 109 aa4.02□□□□□ -1.77
VAPA-203ENST00000577539 FABP2P12104 132 aa4.02□□□□□ -1.77
VAPA-203ENST00000577539 EMP1P54849 157 aa4.02□□□□□ -1.77
VAPA-203ENST00000577539 OR11H1Q8NG94 326 aa4.02□□□□□ -1.77
VAPA-203ENST00000577539 OR11H2Q8NH07 326 aa4.02□□□□□ -1.77
VAPA-203ENST00000577539 MRAP2Q96G30 205 aa4.02□□□□□ -1.77
VAPA-203ENST00000577539 HIST1H4GQ99525 98 aa4.02□□□□□ -1.77
VAPA-203ENST00000577539 CSTL1Q9H114 145 aa4.02□□□□□ -1.77
VAPA-203ENST00000577539 JPT2Q9H910 190 aa4.02□□□□□ -1.77
VAPA-203ENST00000577539 SMPXQ9UHP9 88 aa4.02□□□□□ -1.77
VAPA-203ENST00000577539 HHLA3Q9XRX5 114 aa4.02□□□□□ -1.77
VAPA-203ENST00000577539 LENEPQ9Y5L5 61 aa4.02□□□□□ -1.77
VAPA-203ENST00000577539 TRAV12-2A0A075B6T6 113 aa4.02□□□□□ -1.77
VAPA-203ENST00000577539 ORMDL2Q53FV1 153 aa4.02□□□□□ -1.77
VAPA-203ENST00000577539 OCIAD2Q56VL3 154 aa4.02□□□□□ -1.77
VAPA-203ENST00000577539 C2orf66Q6UXQ4 117 aa4.02□□□□□ -1.77
VAPA-203ENST00000577539 ADAMTSL5Q6ZMM2 481 aa4.02□□□□□ -1.77
VAPA-203ENST00000577539 C2CD3Q4AC94 2353 aa4.01□□□□□ -1.77
VAPA-203ENST00000577539 IGLV2-18A0A075B6J9 118 aa4.01□□□□□ -1.77
VAPA-203ENST00000577539 A0A087WX48 190 aa4.01□□□□□ -1.77
VAPA-203ENST00000577539 K7ERU9 68 aa4.01□□□□□ -1.77
VAPA-203ENST00000577539 SIVA1O15304 175 aa4.01□□□□□ -1.77
VAPA-203ENST00000577539 RPL24P83731 157 aaKnown RBP4.01□□□□□ -1.77
VAPA-203ENST00000577539 DEFB112Q30KQ8 113 aa4.01□□□□□ -1.77
VAPA-203ENST00000577539 RASL10AQ92737 203 aa4.01□□□□□ -1.77
VAPA-203ENST00000577539 ZNF462Q96JM2 2506 aa4.01□□□□□ -1.77
VAPA-203ENST00000577539 H7C1H1 209 aa4.01□□□□□ -1.77
VAPA-203ENST00000577539 RBX1P62877 108 aa4.01□□□□□ -1.77
VAPA-203ENST00000577539 SCGB1D4Q6XE38 83 aa4.01□□□□□ -1.77
VAPA-203ENST00000577539 MAPKAPK5-AS1Q8N8E1 139 aa4.01□□□□□ -1.77
VAPA-203ENST00000577539 ZNF256Q9Y2P7 627 aaPredicted RBP4.01□□□□□ -1.77
VAPA-203ENST00000577539 FLNCQ14315 2725 aa4.01□□□□□ -1.77
VAPA-203ENST00000577539 AGRNO00468 2067 aa4.01□□□□□ -1.77
VAPA-203ENST00000577539 VCYO14598 125 aa4.01□□□□□ -1.77
VAPA-203ENST00000577539 RS1O15537 224 aa4.01□□□□□ -1.77
VAPA-203ENST00000577539 SYNJ2BPP57105 145 aa4.01□□□□□ -1.77
VAPA-203ENST00000577539 F8VRH5 84 aa4□□□□□ -1.77
VAPA-203ENST00000577539 VPREB1P12018 145 aa4□□□□□ -1.77
VAPA-203ENST00000577539 ZNF56Q15929 161 aa4□□□□□ -1.77
VAPA-203ENST00000577539 KLK9Q2XQG4 91 aa4□□□□□ -1.77
VAPA-203ENST00000577539 KLK9Q9UKQ9 250 aa4□□□□□ -1.77
VAPA-203ENST00000577539 H3BUA1 57 aa4□□□□□ -1.77
VAPA-203ENST00000577539 SOCS3O14543 225 aa4□□□□□ -1.77
VAPA-203ENST00000577539 PLNP26678 52 aa4□□□□□ -1.77
VAPA-203ENST00000577539 SPINK13Q1W4C9 94 aa4□□□□□ -1.77
VAPA-203ENST00000577539 LINC00476Q8WZB0 136 aa4□□□□□ -1.77
VAPA-203ENST00000577539 Q9H8V8 135 aa4□□□□□ -1.77
VAPA-203ENST00000577539 CYSLTR1Q9Y271 337 aa4□□□□□ -1.77
VAPA-203ENST00000577539 ANKRD17O75179 2603 aaKnown RBP4□□□□□ -1.77
VAPA-203ENST00000577539 IGHV4-4A0A075B6R2 117 aa4□□□□□ -1.77
VAPA-203ENST00000577539 A0A1W2PPM0 123 aa4□□□□□ -1.77
VAPA-203ENST00000577539 K7EP34 96 aa4□□□□□ -1.77
VAPA-203ENST00000577539 DUSP14O95147 198 aaKnown RBP4□□□□□ -1.77
VAPA-203ENST00000577539 RNASE3P12724 160 aaKnown RBP4□□□□□ -1.77
VAPA-203ENST00000577539 SNRPD3P62318 126 aaKnown RBP4□□□□□ -1.77
VAPA-203ENST00000577539 SRSF9Q13242 221 aaKnown RBP eCLIP4□□□□□ -1.77
VAPA-203ENST00000577539 KIR2DL4Q99706 377 aa4□□□□□ -1.77
VAPA-203ENST00000577539 TRGV11A0A075B6L2 103 aa3.99□□□□□ -1.77
VAPA-203ENST00000577539 CRIP2P52943 208 aaPredicted RBP3.99□□□□□ -1.77
VAPA-203ENST00000577539 C6orf226Q5I0X4 101 aa3.99□□□□□ -1.77
VAPA-203ENST00000577539 SFTA2Q6UW10 78 aa3.99□□□□□ -1.77
VAPA-203ENST00000577539 C20orf78Q9BR46 151 aa3.99□□□□□ -1.77
VAPA-203ENST00000577539 TP53TG1Q9Y2A0 90 aa3.99□□□□□ -1.77
VAPA-203ENST00000577539 ZNF815PA8K554 130 aa3.99□□□□□ -1.77
VAPA-203ENST00000577539 PRB1P04280 392 aa3.99□□□□□ -1.77
VAPA-203ENST00000577539 HLA-DRB4P13762 266 aa3.99□□□□□ -1.77
VAPA-203ENST00000577539 RIPPLY3P57055 190 aa3.99□□□□□ -1.77
VAPA-203ENST00000577539 HERV-K104P63124 156 aa3.99□□□□□ -1.77
VAPA-203ENST00000577539 TMEM170BQ5T4T1 132 aa3.99□□□□□ -1.77
VAPA-203ENST00000577539 CEND1Q8N111 149 aa3.99□□□□□ -1.77
VAPA-203ENST00000577539 HLA-DRB4X5D2U9 266 aa3.99□□□□□ -1.77
VAPA-203ENST00000577539 CFAP46Q8IYW2 2715 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms