RNA–Protein interactions for RNA: ENST00000575338.1

SMG6-217, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-217ENST00000575338 CSMD1Q96PZ7 3565 aa5.04□□□□□ -1.6
SMG6-217ENST00000575338 ABCA12Q86UK0 2595 aa5.04□□□□□ -1.6
SMG6-217ENST00000575338 ITPR3Q14573 2671 aa5.03□□□□□ -1.6
SMG6-217ENST00000575338 ZFHX3Q15911 3703 aa5.03□□□□□ -1.6
SMG6-217ENST00000575338 TEX15Q9BXT5 2789 aa5.03□□□□□ -1.6
SMG6-217ENST00000575338 POLQO75417 2590 aa5.03□□□□□ -1.6
SMG6-217ENST00000575338 M0R2P5 195 aa5.03□□□□□ -1.6
SMG6-217ENST00000575338 SIVA1O15304 175 aa5.03□□□□□ -1.6
SMG6-217ENST00000575338 DLEU1O43261 78 aa5.03□□□□□ -1.6
SMG6-217ENST00000575338 SAP30O75446 220 aa5.03□□□□□ -1.6
SMG6-217ENST00000575338 DPM2O94777 84 aa5.03□□□□□ -1.6
SMG6-217ENST00000575338 IGKCP01834 107 aa5.03□□□□□ -1.6
SMG6-217ENST00000575338 COX8AP10176 69 aa5.03□□□□□ -1.6
SMG6-217ENST00000575338 RHOHQ15669 191 aa5.03□□□□□ -1.6
SMG6-217ENST00000575338 MORN3Q6PF18 240 aaPredicted RBP5.03□□□□□ -1.6
SMG6-217ENST00000575338 LINC00173Q6ZV60 143 aa5.03□□□□□ -1.6
SMG6-217ENST00000575338 RASL10AQ92737 203 aa5.03□□□□□ -1.6
SMG6-217ENST00000575338 TOMM6Q96B49 74 aa5.03□□□□□ -1.6
SMG6-217ENST00000575338 SCGB3A1Q96QR1 104 aa5.03□□□□□ -1.6
SMG6-217ENST00000575338 TMEM208Q9BTX3 173 aa5.03□□□□□ -1.6
SMG6-217ENST00000575338 KIF25-AS1Q9Y6Z4 181 aa5.03□□□□□ -1.6
SMG6-217ENST00000575338 CELSR1Q9NYQ6 3014 aa5.02□□□□□ -1.61
SMG6-217ENST00000575338 AGRNO00468 2067 aa5.02□□□□□ -1.61
SMG6-217ENST00000575338 A0A087WX48 190 aa5.02□□□□□ -1.61
SMG6-217ENST00000575338 TRAV26-2A0A0B4J265 109 aa5.02□□□□□ -1.61
SMG6-217ENST00000575338 TRBV27A0A0K0K1C4 114 aa5.02□□□□□ -1.61
SMG6-217ENST00000575338 A0A1W2PRX2 142 aa5.02□□□□□ -1.61
SMG6-217ENST00000575338 hDV102S1A0JD36 115 aa5.02□□□□□ -1.61
SMG6-217ENST00000575338 KNCNA6PVL3 124 aa5.02□□□□□ -1.61
SMG6-217ENST00000575338 F8VRH5 84 aa5.02□□□□□ -1.61
SMG6-217ENST00000575338 CIDEAO60543 219 aa5.02□□□□□ -1.61
SMG6-217ENST00000575338 PF4P02776 101 aa5.02□□□□□ -1.61
SMG6-217ENST00000575338 GATA1P15976 413 aaPredicted RBP5.02□□□□□ -1.61
SMG6-217ENST00000575338 INSL3P51460 131 aa5.02□□□□□ -1.61
SMG6-217ENST00000575338 PROK1P58294 105 aa5.02□□□□□ -1.61
SMG6-217ENST00000575338 TMEM97Q5BJF2 176 aa5.02□□□□□ -1.61
SMG6-217ENST00000575338 FAM74A4Q5TZK3 123 aa5.02□□□□□ -1.61
SMG6-217ENST00000575338 SUMO4Q6EEV6 95 aa5.02□□□□□ -1.61
SMG6-217ENST00000575338 Q6ZQT7 251 aa5.02□□□□□ -1.61
SMG6-217ENST00000575338 ERASQ7Z444 233 aa5.02□□□□□ -1.61
SMG6-217ENST00000575338 TMEM141Q96I45 108 aa5.02□□□□□ -1.61
SMG6-217ENST00000575338 DNAJC30Q96LL9 226 aa5.02□□□□□ -1.61
SMG6-217ENST00000575338 C18orf15Q96N68 181 aa5.02□□□□□ -1.61
SMG6-217ENST00000575338 LINC01587Q99440 93 aa5.02□□□□□ -1.61
SMG6-217ENST00000575338 SNHG12Q9BXW3 62 aa5.02□□□□□ -1.61
SMG6-217ENST00000575338 CSTL1Q9H114 145 aa5.02□□□□□ -1.61
SMG6-217ENST00000575338 SELENOKQ9Y6D0 94 aa5.02□□□□□ -1.61
SMG6-217ENST00000575338 MYO9AB2RTY4 2548 aa5.02□□□□□ -1.61
SMG6-217ENST00000575338 SDHAF1A6NFY7 115 aa5.01□□□□□ -1.61
SMG6-217ENST00000575338 I3L3M4 83 aa5.01□□□□□ -1.61
SMG6-217ENST00000575338 LY6G6DO95868 133 aa5.01□□□□□ -1.61
SMG6-217ENST00000575338 IGLV1-51P01701 117 aa5.01□□□□□ -1.61
SMG6-217ENST00000575338 NPSP0C0P6 89 aa5.01□□□□□ -1.61
SMG6-217ENST00000575338 POLR2KP53803 58 aaKnown RBP5.01□□□□□ -1.61
SMG6-217ENST00000575338 SMAGPQ0VAQ4 97 aa5.01□□□□□ -1.61
SMG6-217ENST00000575338 ODF1Q14990 250 aa5.01□□□□□ -1.61
SMG6-217ENST00000575338 C2orf66Q6UXQ4 117 aa5.01□□□□□ -1.61
SMG6-217ENST00000575338 TIMM17AQ99595 171 aa5.01□□□□□ -1.61
SMG6-217ENST00000575338 ZMAT4Q9H898 229 aa5.01□□□□□ -1.61
SMG6-217ENST00000575338 MDFICQ9P1T7 246 aa5.01□□□□□ -1.61
SMG6-217ENST00000575338 SVEP1Q4LDE5 3571 aa5.01□□□□□ -1.61
SMG6-217ENST00000575338 CENPEQ02224 2701 aa5.01□□□□□ -1.61
SMG6-217ENST00000575338 ITPR2Q14571 2701 aa5□□□□□ -1.61
SMG6-217ENST00000575338 A0A087WWL8 130 aa5□□□□□ -1.61
SMG6-217ENST00000575338 EREGO14944 169 aa5□□□□□ -1.61
SMG6-217ENST00000575338 GAS8-AS1O95177 125 aa5□□□□□ -1.61
SMG6-217ENST00000575338 CRYGDP07320 174 aa5□□□□□ -1.61
SMG6-217ENST00000575338 RIPPLY3P57055 190 aa5□□□□□ -1.61
SMG6-217ENST00000575338 LINC00315P59091 139 aa5□□□□□ -1.61
SMG6-217ENST00000575338 HERVK_113P61574 105 aa5□□□□□ -1.61
SMG6-217ENST00000575338 NSUN5P1Q3KNT7 163 aa5□□□□□ -1.61
SMG6-217ENST00000575338 MAJINQ3KP22 176 aa5□□□□□ -1.61
SMG6-217ENST00000575338 ODF3L2Q3SX64 289 aa5□□□□□ -1.61
SMG6-217ENST00000575338 ZFP2Q6ZN57 461 aa5□□□□□ -1.61
SMG6-217ENST00000575338 C11orf44Q8N8P7 122 aa5□□□□□ -1.61
SMG6-217ENST00000575338 RPL39LQ96EH5 51 aaKnown RBP5□□□□□ -1.61
SMG6-217ENST00000575338 FLNAP21333 2647 aaKnown RBP5□□□□□ -1.61
SMG6-217ENST00000575338 M0QY20 66 aa4.99□□□□□ -1.61
SMG6-217ENST00000575338 HTN1P15515 57 aa4.99□□□□□ -1.61
SMG6-217ENST00000575338 CRYBA4P53673 196 aa4.99□□□□□ -1.61
SMG6-217ENST00000575338 FXYD7P58549 80 aa4.99□□□□□ -1.61
SMG6-217ENST00000575338 SEC11AP67812 179 aa4.99□□□□□ -1.61
SMG6-217ENST00000575338 PMVKQ15126 192 aa4.99□□□□□ -1.61
SMG6-217ENST00000575338 BATFQ16520 125 aa4.99□□□□□ -1.61
SMG6-217ENST00000575338 C9orf66Q5T8R8 295 aa4.99□□□□□ -1.61
SMG6-217ENST00000575338 GTSCR1Q86UQ5 136 aa4.99□□□□□ -1.61
SMG6-217ENST00000575338 BOD1L2Q8IYS8 172 aa4.99□□□□□ -1.61
SMG6-217ENST00000575338 TMEM263Q8WUH6 116 aaKnown RBP4.99□□□□□ -1.61
SMG6-217ENST00000575338 C16orf74Q96GX8 76 aa4.99□□□□□ -1.61
SMG6-217ENST00000575338 MCRIP2Q9BUT9 160 aaKnown RBP4.99□□□□□ -1.61
SMG6-217ENST00000575338 CHTOPQ9Y3Y2 248 aaKnown RBP4.99□□□□□ -1.61
SMG6-217ENST00000575338 TNFRSF18Q9Y5U5 241 aa4.99□□□□□ -1.61
SMG6-217ENST00000575338 CSMD2Q7Z408 3487 aa4.99□□□□□ -1.61
SMG6-217ENST00000575338 TEP1Q99973 2627 aaKnown RBP4.99□□□□□ -1.61
SMG6-217ENST00000575338 UNC79Q9P2D8 2635 aa4.99□□□□□ -1.61
SMG6-217ENST00000575338 C2CD3Q4AC94 2353 aa4.99□□□□□ -1.61
SMG6-217ENST00000575338 PDZD2O15018 2839 aa4.98□□□□□ -1.61
SMG6-217ENST00000575338 MAP1AP78559 2803 aaPredicted RBP4.98□□□□□ -1.61
SMG6-217ENST00000575338 MXRA5Q9NR99 2828 aa4.98□□□□□ -1.61
SMG6-217ENST00000575338 RBMY1BA6NDE4 496 aaKnown RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms