RNA–Protein interactions for RNA: ENST00000575185.1

SPNS3-203, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 5

Gene SPNS3, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-203ENST00000575185 ASIPP42127 132 aa13.96□□□□□ -0.17
SPNS3-203ENST00000575185 FHL2Q14192 279 aa13.96□□□□□ -0.17
SPNS3-203ENST00000575185 LINC01559Q495D7 138 aa13.96□□□□□ -0.17
SPNS3-203ENST00000575185 DAZAP1Q96EP5 407 aaKnown RBP13.96□□□□□ -0.17
SPNS3-203ENST00000575185 HHLA3Q9XRX5 114 aa13.96□□□□□ -0.17
SPNS3-203ENST00000575185 IGKV3D-20A0A0C4DH25 116 aa13.95□□□□□ -0.18
SPNS3-203ENST00000575185 SRP19P09132 144 aaKnown RBP13.95□□□□□ -0.18
SPNS3-203ENST00000575185 S100A4P26447 101 aaKnown RBP13.95□□□□□ -0.18
SPNS3-203ENST00000575185 CEBPGP53567 150 aa13.95□□□□□ -0.18
SPNS3-203ENST00000575185 MRPL23Q16540 153 aaKnown RBP13.95□□□□□ -0.18
SPNS3-203ENST00000575185 PRR27Q6MZM9 219 aa13.95□□□□□ -0.18
SPNS3-203ENST00000575185 NEGR1Q7Z3B1 354 aa13.95□□□□□ -0.18
SPNS3-203ENST00000575185 TMEM70Q9BUB7 260 aa13.95□□□□□ -0.18
SPNS3-203ENST00000575185 KRBOX1C9JBD0 128 aa13.94□□□□□ -0.18
SPNS3-203ENST00000575185 M0R2P5 195 aa13.94□□□□□ -0.18
SPNS3-203ENST00000575185 CXCL1P09341 107 aa13.94□□□□□ -0.18
SPNS3-203ENST00000575185 IFITM2Q01629 132 aa13.94□□□□□ -0.18
SPNS3-203ENST00000575185 FAM74A3Q4VXF1 159 aa13.94□□□□□ -0.18
SPNS3-203ENST00000575185 DNLZQ5SXM8 178 aa13.94□□□□□ -0.18
SPNS3-203ENST00000575185 FAM30AQ9NZY2 134 aa13.94□□□□□ -0.18
SPNS3-203ENST00000575185 M0R036 132 aa13.93□□□□□ -0.18
SPNS3-203ENST00000575185 IGLV2-8P01709 118 aa13.93□□□□□ -0.18
SPNS3-203ENST00000575185 SMIM7Q9BQ49 75 aa13.93□□□□□ -0.18
SPNS3-203ENST00000575185 FAT3Q8TDW7 4589 aa13.92□□□□□ -0.18
SPNS3-203ENST00000575185 TRBV20OR9-2A0A075B6H5 130 aa13.92□□□□□ -0.18
SPNS3-203ENST00000575185 LRCOL1A6NCL2 159 aa13.92□□□□□ -0.18
SPNS3-203ENST00000575185 ZNF727A8MUV8 499 aa13.92□□□□□ -0.18
SPNS3-203ENST00000575185 K7EQD1 137 aa13.92□□□□□ -0.18
SPNS3-203ENST00000575185 EVI2AP22794 236 aa13.92□□□□□ -0.18
SPNS3-203ENST00000575185 PTH2Q96A98 100 aa13.92□□□□□ -0.18
SPNS3-203ENST00000575185 C9orf85Q96MD7 179 aa13.92□□□□□ -0.18
SPNS3-203ENST00000575185 SFTA3P0C7M3 94 aa13.91□□□□□ -0.18
SPNS3-203ENST00000575185 SRIP30626 198 aa13.91□□□□□ -0.18
SPNS3-203ENST00000575185 RPS20P60866 119 aaKnown RBP13.91□□□□□ -0.18
SPNS3-203ENST00000575185 RASL10AQ92737 203 aa13.91□□□□□ -0.18
SPNS3-203ENST00000575185 IL36BQ9NZH7 164 aa13.91□□□□□ -0.18
SPNS3-203ENST00000575185 XKRY2A2RUG3 117 aa13.9□□□□□ -0.18
SPNS3-203ENST00000575185 P01737 135 aa13.9□□□□□ -0.18
SPNS3-203ENST00000575185 CRYGDP07320 174 aa13.9□□□□□ -0.18
SPNS3-203ENST00000575185 SLAQ13239 276 aa13.9□□□□□ -0.18
SPNS3-203ENST00000575185 OCC1Q8TAD7 63 aa13.9□□□□□ -0.18
SPNS3-203ENST00000575185 TRGV4A0A0C4DH28 118 aa13.89□□□□□ -0.19
SPNS3-203ENST00000575185 PGPEP1LA6NFU8 196 aa13.89□□□□□ -0.19
SPNS3-203ENST00000575185 RNASE3P12724 160 aaKnown RBP13.89□□□□□ -0.19
SPNS3-203ENST00000575185 PIK3CD-AS1Q5SR53 167 aa13.89□□□□□ -0.19
SPNS3-203ENST00000575185 TMSB15BA0A087X1C1 80 aa13.88□□□□□ -0.19
SPNS3-203ENST00000575185 C19orf71A6NCJ1 209 aa13.88□□□□□ -0.19
SPNS3-203ENST00000575185 KRTAP29-1A8MX34 341 aaPredicted RBP13.88□□□□□ -0.19
SPNS3-203ENST00000575185 K7EP13 123 aa13.88□□□□□ -0.19
SPNS3-203ENST00000575185 GYPEP15421 78 aa13.88□□□□□ -0.19
SPNS3-203ENST00000575185 SYT8Q8NBV8 401 aa13.88□□□□□ -0.19
SPNS3-203ENST00000575185 NTN5Q8WTR8 489 aaPredicted RBP13.88□□□□□ -0.19
SPNS3-203ENST00000575185 ZNF479Q96JC4 524 aa13.88□□□□□ -0.19
SPNS3-203ENST00000575185 H3BVH4 76 aa13.87□□□□□ -0.19
SPNS3-203ENST00000575185 PSCAO43653 123 aa13.87□□□□□ -0.19
SPNS3-203ENST00000575185 CIDEAO60543 219 aa13.87□□□□□ -0.19
SPNS3-203ENST00000575185 Q8N814 137 aa13.87□□□□□ -0.19
SPNS3-203ENST00000575185 OR2D3Q8NGH3 330 aa13.87□□□□□ -0.19
SPNS3-203ENST00000575185 GRIFINA4D1Z8 144 aa13.86□□□□□ -0.19
SPNS3-203ENST00000575185 ARMS2P0C7Q2 107 aa13.86□□□□□ -0.19
SPNS3-203ENST00000575185 SRSF3P84103 164 aaKnown RBP13.86□□□□□ -0.19
SPNS3-203ENST00000575185 TMEM241Q24JQ0 296 aa13.86□□□□□ -0.19
SPNS3-203ENST00000575185 ZNF876PQ49A33 203 aa13.86□□□□□ -0.19
SPNS3-203ENST00000575185 PHLDA3Q9Y5J5 127 aa13.86□□□□□ -0.19
SPNS3-203ENST00000575185 TRAV4A0A0B4J268 109 aa13.85□□□□□ -0.19
SPNS3-203ENST00000575185 NAT8Q9UHE5 227 aa13.85□□□□□ -0.19
SPNS3-203ENST00000575185 LOC100131303A0A0U1RQF7 123 aa13.84□□□□□ -0.19
SPNS3-203ENST00000575185 C9JQL5 133 aa13.84□□□□□ -0.19
SPNS3-203ENST00000575185 K7EN84 100 aa13.84□□□□□ -0.19
SPNS3-203ENST00000575185 RPL19P84098 196 aaKnown RBP13.84□□□□□ -0.19
SPNS3-203ENST00000575185 UQCC3Q6UW78 93 aa13.84□□□□□ -0.19
SPNS3-203ENST00000575185 FAM231DQ6ZW35 169 aa13.84□□□□□ -0.19
SPNS3-203ENST00000575185 LINC01551Q86U37 167 aa13.84□□□□□ -0.19
SPNS3-203ENST00000575185 ZFP82Q8N141 532 aa13.84□□□□□ -0.19
SPNS3-203ENST00000575185 LINC00528Q8N1L1 170 aa13.84□□□□□ -0.19
SPNS3-203ENST00000575185 C10orf126Q8N4M7 172 aa13.84□□□□□ -0.19
SPNS3-203ENST00000575185 NUDT10Q8NFP7 164 aa13.84□□□□□ -0.19
SPNS3-203ENST00000575185 OR4C5Q8NGB2 326 aa13.84□□□□□ -0.19
SPNS3-203ENST00000575185 NUDT11Q96G61 164 aa13.84□□□□□ -0.19
SPNS3-203ENST00000575185 A8MWV9 139 aa13.83□□□□□ -0.2
SPNS3-203ENST00000575185 RPP21Q9H633 154 aaKnown RBP13.83□□□□□ -0.2
SPNS3-203ENST00000575185 Q9HAA7 133 aa13.83□□□□□ -0.2
SPNS3-203ENST00000575185 PLA2G1BP04054 148 aaKnown RBP13.82□□□□□ -0.2
SPNS3-203ENST00000575185 OR5AL1P0C617 328 aa13.82□□□□□ -0.2
SPNS3-203ENST00000575185 SNAI2O43623 268 aa13.81□□□□□ -0.2
SPNS3-203ENST00000575185 GATCO43716 136 aaKnown RBP13.81□□□□□ -0.2
SPNS3-203ENST00000575185 C15orf54Q8N8G6 183 aa13.81□□□□□ -0.2
SPNS3-203ENST00000575185 FER1L6-AS1Q8NA97 138 aa13.81□□□□□ -0.2
SPNS3-203ENST00000575185 SSBP4Q9BWG4 385 aaPredicted RBP13.81□□□□□ -0.2
SPNS3-203ENST00000575185 RNASE7Q9H1E1 156 aaKnown RBP13.81□□□□□ -0.2
SPNS3-203ENST00000575185 IGHV3-38A0A0C4DH36 116 aa13.8□□□□□ -0.2
SPNS3-203ENST00000575185 F2Z2F3 143 aa13.8□□□□□ -0.2
SPNS3-203ENST00000575185 RS1O15537 224 aa13.8□□□□□ -0.2
SPNS3-203ENST00000575185 CT83Q5H943 113 aa13.8□□□□□ -0.2
SPNS3-203ENST00000575185 OSTCQ9NRP0 149 aa13.8□□□□□ -0.2
SPNS3-203ENST00000575185 PKHD1L1Q86WI1 4243 aa13.79□□□□□ -0.2
SPNS3-203ENST00000575185 WFDC2Q14508 124 aa13.79□□□□□ -0.2
SPNS3-203ENST00000575185 SPANXN1Q5VSR9 72 aa13.79□□□□□ -0.2
SPNS3-203ENST00000575185 A8MWL6 223 aa13.78□□□□□ -0.2
SPNS3-203ENST00000575185 IBA57-AS1B1ANH7 110 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms