RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 LOC107984156A0A0G2JMH3 177 aa7.82□□□□□ -1.16
USP43-205ENST00000574408 H7C2G1 150 aa7.82□□□□□ -1.16
USP43-205ENST00000574408 ARL17AQ8IVW1 177 aa7.82□□□□□ -1.16
USP43-205ENST00000574408 C11orf44Q8N8P7 122 aa7.82□□□□□ -1.16
USP43-205ENST00000574408 C4orf3Q8WVX3 66 aa7.82□□□□□ -1.16
USP43-205ENST00000574408 CSTL1Q9H114 145 aa7.82□□□□□ -1.16
USP43-205ENST00000574408 DKK2Q9UBU2 259 aa7.82□□□□□ -1.16
USP43-205ENST00000574408 A0A096LNJ9 63 aa7.82□□□□□ -1.16
USP43-205ENST00000574408 TRAV26-2A0A0B4J265 109 aa7.82□□□□□ -1.16
USP43-205ENST00000574408 TRAV12-3A0A0B4J271 114 aa7.82□□□□□ -1.16
USP43-205ENST00000574408 A0A0J9YX75 114 aa7.82□□□□□ -1.16
USP43-205ENST00000574408 CD5LO43866 347 aa7.82□□□□□ -1.16
USP43-205ENST00000574408 NF1P21359 2839 aa7.82□□□□□ -1.16
USP43-205ENST00000574408 CRXO43186 299 aaPredicted RBP7.81□□□□□ -1.16
USP43-205ENST00000574408 DEFB125Q8N687 156 aa7.81□□□□□ -1.16
USP43-205ENST00000574408 ZNF747Q9BV97 191 aa7.81□□□□□ -1.16
USP43-205ENST00000574408 ETDBQ3ZM63 59 aa7.81□□□□□ -1.16
USP43-205ENST00000574408 SH2D6Q7Z4S9 175 aa7.81□□□□□ -1.16
USP43-205ENST00000574408 PET117Q6UWS5 81 aa7.81□□□□□ -1.16
USP43-205ENST00000574408 FAM159AQ6UWV7 190 aa7.81□□□□□ -1.16
USP43-205ENST00000574408 ZNF418Q8TF45 676 aaPredicted RBP7.81□□□□□ -1.16
USP43-205ENST00000574408 TRAV12-2A0A075B6T6 113 aa7.8□□□□□ -1.16
USP43-205ENST00000574408 HBDP02042 147 aa7.8□□□□□ -1.16
USP43-205ENST00000574408 LEPP41159 167 aa7.8□□□□□ -1.16
USP43-205ENST00000574408 OR9G4Q8NGQ1 327 aa7.8□□□□□ -1.16
USP43-205ENST00000574408 HIVEP2P31629 2446 aa7.8□□□□□ -1.16
USP43-205ENST00000574408 GCN1Q92616 2671 aaKnown RBP7.8□□□□□ -1.16
USP43-205ENST00000574408 RNASE3P12724 160 aaKnown RBP7.8□□□□□ -1.16
USP43-205ENST00000574408 SAMD5Q5TGI4 173 aa7.8□□□□□ -1.16
USP43-205ENST00000574408 DLX4Q92988 240 aaPredicted RBP7.8□□□□□ -1.16
USP43-205ENST00000574408 PEMTQ9UBM1 199 aa7.8□□□□□ -1.16
USP43-205ENST00000574408 TEX48A0A1B0GUV7 120 aa7.8□□□□□ -1.16
USP43-205ENST00000574408 SPINK13Q1W4C9 94 aa7.8□□□□□ -1.16
USP43-205ENST00000574408 C14orf178Q8N769 122 aaPredicted RBP7.8□□□□□ -1.16
USP43-205ENST00000574408 HIST1H4GQ99525 98 aa7.8□□□□□ -1.16
USP43-205ENST00000574408 A0A1W2PRX2 142 aa7.79□□□□□ -1.16
USP43-205ENST00000574408 SMIM13P0DJ93 91 aa7.79□□□□□ -1.16
USP43-205ENST00000574408 MED14OSP0DP75 135 aa7.79□□□□□ -1.16
USP43-205ENST00000574408 EMP1P54849 157 aa7.79□□□□□ -1.16
USP43-205ENST00000574408 NXT2Q9NPJ8 142 aaKnown RBP7.79□□□□□ -1.16
USP43-205ENST00000574408 CD7P09564 240 aa7.79□□□□□ -1.16
USP43-205ENST00000574408 IFI27L1Q96BM0 104 aa7.79□□□□□ -1.16
USP43-205ENST00000574408 ODF3Q96PU9 254 aa7.79□□□□□ -1.16
USP43-205ENST00000574408 SCRT2Q9NQ03 307 aa7.79□□□□□ -1.16
USP43-205ENST00000574408 H3BMG7 143 aa7.78□□□□□ -1.16
USP43-205ENST00000574408 DUSP14O95147 198 aaKnown RBP7.78□□□□□ -1.16
USP43-205ENST00000574408 FOXI2Q6ZQN5 318 aa7.78□□□□□ -1.16
USP43-205ENST00000574408 TMEM61Q8N0U2 210 aa7.78□□□□□ -1.16
USP43-205ENST00000574408 NRACQ8N912 160 aa7.78□□□□□ -1.16
USP43-205ENST00000574408 DYNLRB2Q8TF09 96 aa7.78□□□□□ -1.16
USP43-205ENST00000574408 MGPP08493 103 aa7.78□□□□□ -1.16
USP43-205ENST00000574408 DEFB131AP59861 70 aa7.78□□□□□ -1.16
USP43-205ENST00000574408 SCGB1D4Q6XE38 83 aa7.78□□□□□ -1.16
USP43-205ENST00000574408 TSSC4Q9Y5U2 329 aaPredicted RBP7.78□□□□□ -1.16
USP43-205ENST00000574408 MUC4Q99102 2169 aa7.78□□□□□ -1.16
USP43-205ENST00000574408 A0A1B0GWB2 263 aa7.78□□□□□ -1.16
USP43-205ENST00000574408 KNCNA6PVL3 124 aa7.78□□□□□ -1.16
USP43-205ENST00000574408 LINC01545Q5VT33 79 aa7.78□□□□□ -1.16
USP43-205ENST00000574408 JMJD8Q96S16 334 aa7.78□□□□□ -1.16
USP43-205ENST00000574408 DPH3P1Q9H4G8 78 aa7.78□□□□□ -1.16
USP43-205ENST00000574408 APOMO95445 188 aa7.77□□□□□ -1.17
USP43-205ENST00000574408 AKAP9Q99996 3911 aa7.77□□□□□ -1.17
USP43-205ENST00000574408 CD28P10747 220 aa7.77□□□□□ -1.17
USP43-205ENST00000574408 AZU1P20160 251 aa7.77□□□□□ -1.17
USP43-205ENST00000574408 SRSF9Q13242 221 aaKnown RBP eCLIP7.77□□□□□ -1.17
USP43-205ENST00000574408 Q8N8P6 123 aa7.77□□□□□ -1.17
USP43-205ENST00000574408 MRAP2Q96G30 205 aa7.77□□□□□ -1.17
USP43-205ENST00000574408 ANK3Q12955 4377 aaKnown RBP7.77□□□□□ -1.17
USP43-205ENST00000574408 SCGB1C2P0DMR2 95 aa7.77□□□□□ -1.17
USP43-205ENST00000574408 COX8AP10176 69 aa7.77□□□□□ -1.17
USP43-205ENST00000574408 ZC2HC1BQ5TFG8 222 aa7.77□□□□□ -1.17
USP43-205ENST00000574408 WFDC2Q14508 124 aa7.76□□□□□ -1.17
USP43-205ENST00000574408 RAX2Q96IS3 184 aa7.76□□□□□ -1.17
USP43-205ENST00000574408 IGLV2-18A0A075B6J9 118 aa7.76□□□□□ -1.17
USP43-205ENST00000574408 SMR3AQ99954 134 aa7.76□□□□□ -1.17
USP43-205ENST00000574408 CYSLTR1Q9Y271 337 aa7.76□□□□□ -1.17
USP43-205ENST00000574408 RNASE1P07998 156 aaKnown RBP7.75□□□□□ -1.17
USP43-205ENST00000574408 FXYD2P54710 66 aa7.75□□□□□ -1.17
USP43-205ENST00000574408 TMEM158Q8WZ71 300 aa7.75□□□□□ -1.17
USP43-205ENST00000574408 IGHV1OR15-1A0A075B7D0 117 aa7.75□□□□□ -1.17
USP43-205ENST00000574408 LINC01546A6NGU7 62 aa7.75□□□□□ -1.17
USP43-205ENST00000574408 LINC01006Q8NI28 216 aa7.75□□□□□ -1.17
USP43-205ENST00000574408 RPL39LQ96EH5 51 aaKnown RBP7.75□□□□□ -1.17
USP43-205ENST00000574408 CITED2Q99967 270 aaPredicted RBP7.75□□□□□ -1.17
USP43-205ENST00000574408 JPT2Q9H910 190 aa7.75□□□□□ -1.17
USP43-205ENST00000574408 C9orf118A6NHY6 69 aa7.75□□□□□ -1.17
USP43-205ENST00000574408 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.75□□□□□ -1.17
USP43-205ENST00000574408 NXPH4O95158 308 aa7.75□□□□□ -1.17
USP43-205ENST00000574408 DEFB114Q30KQ6 69 aa7.75□□□□□ -1.17
USP43-205ENST00000574408 CD300EQ496F6 205 aaPredicted RBP7.75□□□□□ -1.17
USP43-205ENST00000574408 Q8N1Y9 231 aa7.75□□□□□ -1.17
USP43-205ENST00000574408 RASL10AQ92737 203 aa7.75□□□□□ -1.17
USP43-205ENST00000574408 MDFICQ9P1T7 246 aa7.75□□□□□ -1.17
USP43-205ENST00000574408 IGHV3-16A0A0C4DH30 117 aa7.74□□□□□ -1.17
USP43-205ENST00000574408 J3QR89 54 aa7.74□□□□□ -1.17
USP43-205ENST00000574408 SMIM17P0DL12 118 aa7.74□□□□□ -1.17
USP43-205ENST00000574408 CCL24O00175 119 aa7.74□□□□□ -1.17
USP43-205ENST00000574408 SMIM2Q9BVW6 85 aa7.74□□□□□ -1.17
USP43-205ENST00000574408 HLA-DRB4P13762 266 aa7.74□□□□□ -1.17
USP43-205ENST00000574408 SEC11AP67812 179 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms