RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 PMCHL1Q16048 86 aa14.96□□□□□ -0.01
CHRNE-202ENST00000572438 C11orf72Q8NBR9 251 aa14.95□□□□□ -0.02
CHRNE-202ENST00000572438 NIT2Q9NQR4 276 aa14.95□□□□□ -0.02
CHRNE-202ENST00000572438 A0A087WWL8 130 aa14.94□□□□□ -0.02
CHRNE-202ENST00000572438 C3orf56Q8N813 242 aa14.94□□□□□ -0.02
CHRNE-202ENST00000572438 C1QTNF4Q9BXJ3 329 aa14.94□□□□□ -0.02
CHRNE-202ENST00000572438 IGHV3OR16-12A0A075B7B8 117 aa14.94□□□□□ -0.02
CHRNE-202ENST00000572438 PRSS47A8MTI9 375 aa14.94□□□□□ -0.02
CHRNE-202ENST00000572438 IGLL1P15814 213 aa14.94□□□□□ -0.02
CHRNE-202ENST00000572438 NXT2Q9NPJ8 142 aaKnown RBP14.94□□□□□ -0.02
CHRNE-202ENST00000572438 M0R2P5 195 aa14.93□□□□□ -0.02
CHRNE-202ENST00000572438 CDPF1Q6NVV7 123 aa14.93□□□□□ -0.02
CHRNE-202ENST00000572438 PTH2Q96A98 100 aa14.93□□□□□ -0.02
CHRNE-202ENST00000572438 SHISA2Q6UWI4 295 aa14.92□□□□□ -0.02
CHRNE-202ENST00000572438 RASL10AQ92737 203 aa14.92□□□□□ -0.02
CHRNE-202ENST00000572438 SPXQ9BT56 116 aa14.92□□□□□ -0.02
CHRNE-202ENST00000572438 GOLT1BQ9Y3E0 138 aa14.92□□□□□ -0.02
CHRNE-202ENST00000572438 LINC01546A6NGU7 62 aa14.92□□□□□ -0.02
CHRNE-202ENST00000572438 WIPF1O43516 503 aa14.92□□□□□ -0.02
CHRNE-202ENST00000572438 CRYGDP07320 174 aa14.92□□□□□ -0.02
CHRNE-202ENST00000572438 KRTDAPP60985 99 aa14.92□□□□□ -0.02
CHRNE-202ENST00000572438 PIK3CD-AS1Q5SR53 167 aa14.92□□□□□ -0.02
CHRNE-202ENST00000572438 FBN1P35555 2871 aaKnown RBP14.92□□□□□ -0.02
CHRNE-202ENST00000572438 SCGB1D1O95968 90 aa14.91□□□□□ -0.02
CHRNE-202ENST00000572438 AZU1P20160 251 aa14.91□□□□□ -0.02
CHRNE-202ENST00000572438 Q8N8P6 123 aa14.91□□□□□ -0.02
CHRNE-202ENST00000572438 LEPROTL1O95214 131 aa14.9□□□□□ -0.02
CHRNE-202ENST00000572438 PPP1R17O96001 155 aa14.9□□□□□ -0.02
CHRNE-202ENST00000572438 FAM74A4Q5TZK3 123 aa14.9□□□□□ -0.02
CHRNE-202ENST00000572438 C12orf54Q6X4T0 127 aa14.9□□□□□ -0.02
CHRNE-202ENST00000572438 CSNK1G2-AS1Q8NCQ2 148 aa14.9□□□□□ -0.02
CHRNE-202ENST00000572438 TMEM158Q8WZ71 300 aa14.9□□□□□ -0.02
CHRNE-202ENST00000572438 F5H697 171 aa14.89□□□□□ -0.03
CHRNE-202ENST00000572438 C3orf79P0CE67 100 aa14.89□□□□□ -0.03
CHRNE-202ENST00000572438 SUMO4Q6EEV6 95 aa14.89□□□□□ -0.03
CHRNE-202ENST00000572438 RPL39LQ96EH5 51 aaKnown RBP14.89□□□□□ -0.03
CHRNE-202ENST00000572438 C20orf78Q9BR46 151 aa14.89□□□□□ -0.03
CHRNE-202ENST00000572438 NOTCH3Q9UM47 2321 aa14.89□□□□□ -0.03
CHRNE-202ENST00000572438 IGLV2-18A0A075B6J9 118 aa14.89□□□□□ -0.03
CHRNE-202ENST00000572438 SUMO2P61956 95 aaKnown RBP14.88□□□□□ -0.03
CHRNE-202ENST00000572438 RNASE8Q8TDE3 154 aaKnown RBP14.88□□□□□ -0.03
CHRNE-202ENST00000572438 CSTL1Q9H114 145 aa14.88□□□□□ -0.03
CHRNE-202ENST00000572438 A0A096LNJ9 63 aa14.87□□□□□ -0.03
CHRNE-202ENST00000572438 ZNF56Q15929 161 aa14.87□□□□□ -0.03
CHRNE-202ENST00000572438 IL17DQ8TAD2 202 aa14.87□□□□□ -0.03
CHRNE-202ENST00000572438 TMEM263Q8WUH6 116 aaKnown RBP14.87□□□□□ -0.03
CHRNE-202ENST00000572438 A8MWV9 139 aa14.87□□□□□ -0.03
CHRNE-202ENST00000572438 SMIM2Q9BVW6 85 aa14.87□□□□□ -0.03
CHRNE-202ENST00000572438 HSPB8Q9UJY1 196 aa14.87□□□□□ -0.03
CHRNE-202ENST00000572438 HBDP02042 147 aa14.86□□□□□ -0.03
CHRNE-202ENST00000572438 ZNF705AQ6ZN79 300 aaPredicted RBP14.86□□□□□ -0.03
CHRNE-202ENST00000572438 BTF3P20290 206 aaKnown RBP14.85□□□□□ -0.03
CHRNE-202ENST00000572438 LINC00173Q6ZV60 143 aa14.85□□□□□ -0.03
CHRNE-202ENST00000572438 NDUFAF3Q9BU61 184 aa14.85□□□□□ -0.03
CHRNE-202ENST00000572438 MRPL16Q9NX20 251 aaKnown RBP14.85□□□□□ -0.03
CHRNE-202ENST00000572438 Q8N976 141 aa14.85□□□□□ -0.03
CHRNE-202ENST00000572438 TMEM70Q9BUB7 260 aa14.84□□□□□ -0.03
CHRNE-202ENST00000572438 M0QY20 66 aa14.83□□□□□ -0.04
CHRNE-202ENST00000572438 UFSP1Q6NVU6 142 aa14.83□□□□□ -0.04
CHRNE-202ENST00000572438 C16orf74Q96GX8 76 aa14.83□□□□□ -0.04
CHRNE-202ENST00000572438 ST20Q9HBF5 79 aa14.83□□□□□ -0.04
CHRNE-202ENST00000572438 TRRAPQ9Y4A5 3859 aa14.83□□□□□ -0.04
CHRNE-202ENST00000572438 RIPPLY3P57055 190 aa14.82□□□□□ -0.04
CHRNE-202ENST00000572438 S100A12P80511 92 aa14.82□□□□□ -0.04
CHRNE-202ENST00000572438 CFAP126Q5VTH2 177 aa14.82□□□□□ -0.04
CHRNE-202ENST00000572438 FCER1GP30273 86 aa14.82□□□□□ -0.04
CHRNE-202ENST00000572438 RPL32P62910 135 aaKnown RBP14.82□□□□□ -0.04
CHRNE-202ENST00000572438 LAGE3Q14657 143 aa14.82□□□□□ -0.04
CHRNE-202ENST00000572438 TRBV6-5A0A0K0K1A5 114 aa14.81□□□□□ -0.04
CHRNE-202ENST00000572438 TCAPO15273 167 aa14.81□□□□□ -0.04
CHRNE-202ENST00000572438 RRN3P1Q2M238 152 aa14.81□□□□□ -0.04
CHRNE-202ENST00000572438 MAP1LC3CQ9BXW4 147 aa14.81□□□□□ -0.04
CHRNE-202ENST00000572438 SYS1-DBNDD2H3BUS1 97 aa14.8□□□□□ -0.04
CHRNE-202ENST00000572438 RHODO00212 210 aa14.8□□□□□ -0.04
CHRNE-202ENST00000572438 RS1O15537 224 aa14.8□□□□□ -0.04
CHRNE-202ENST00000572438 EDA2RQ9HAV5 297 aa14.8□□□□□ -0.04
CHRNE-202ENST00000572438 TRGV1A0A0A0MS02 117 aa14.8□□□□□ -0.04
CHRNE-202ENST00000572438 IGHV3-73A0A0B4J1V6 119 aa14.8□□□□□ -0.04
CHRNE-202ENST00000572438 K7EMI3 77 aa14.8□□□□□ -0.04
CHRNE-202ENST00000572438 DAZ2Q13117 558 aaKnown RBP14.8□□□□□ -0.04
CHRNE-202ENST00000572438 KIR2DL5BA0A0G2JN68 375 aa14.79□□□□□ -0.04
CHRNE-202ENST00000572438 KIR2DL5BA0A0G2JPC4 375 aa14.79□□□□□ -0.04
CHRNE-202ENST00000572438 PLAC8L1A1L4L8 177 aa14.79□□□□□ -0.04
CHRNE-202ENST00000572438 PCP4L1A6NKN8 68 aa14.79□□□□□ -0.04
CHRNE-202ENST00000572438 H7C1H1 209 aa14.79□□□□□ -0.04
CHRNE-202ENST00000572438 POLR2KP53803 58 aaKnown RBP14.79□□□□□ -0.04
CHRNE-202ENST00000572438 LGALS9BQ3B8N2 356 aa14.79□□□□□ -0.04
CHRNE-202ENST00000572438 TEX43Q6ZNM6 134 aa14.79□□□□□ -0.04
CHRNE-202ENST00000572438 KIR2DL5AQ8N109 375 aa14.79□□□□□ -0.04
CHRNE-202ENST00000572438 KIR2DL5BQ8NHK3 375 aa14.79□□□□□ -0.04
CHRNE-202ENST00000572438 ORMDL2Q53FV1 153 aa14.78□□□□□ -0.04
CHRNE-202ENST00000572438 OXLD1Q5BKU9 147 aa14.78□□□□□ -0.04
CHRNE-202ENST00000572438 PET117Q6UWS5 81 aa14.78□□□□□ -0.04
CHRNE-202ENST00000572438 SPATA12Q7Z6I5 190 aa14.78□□□□□ -0.04
CHRNE-202ENST00000572438 NOP10Q9NPE3 64 aaKnown RBP14.78□□□□□ -0.04
CHRNE-202ENST00000572438 STAB1Q9NY15 2570 aa14.77□□□□□ -0.04
CHRNE-202ENST00000572438 SDHAF1A6NFY7 115 aa14.77□□□□□ -0.05
CHRNE-202ENST00000572438 VCYO14598 125 aa14.77□□□□□ -0.05
CHRNE-202ENST00000572438 APOC4P55056 127 aa14.77□□□□□ -0.05
CHRNE-202ENST00000572438 ZFP2Q6ZN57 461 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms