RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 VPS13BQ7Z7G8 4022 aa18.36■□□□□ 0.53
UBFD1-206ENST00000566669 SFRP2Q96HF1 295 aa18.36■□□□□ 0.53
UBFD1-206ENST00000566669 MAP1LC3BQ9GZQ8 125 aa18.36■□□□□ 0.53
UBFD1-206ENST00000566669 SH2D1AO60880 128 aa18.35■□□□□ 0.53
UBFD1-206ENST00000566669 LINC01559Q495D7 138 aa18.35■□□□□ 0.53
UBFD1-206ENST00000566669 ZFP82Q8N141 532 aa18.35■□□□□ 0.53
UBFD1-206ENST00000566669 SAMD10Q9BYL1 202 aa18.35■□□□□ 0.53
UBFD1-206ENST00000566669 M0R036 132 aa18.34■□□□□ 0.53
UBFD1-206ENST00000566669 CRIP1P50238 77 aa18.34■□□□□ 0.53
UBFD1-206ENST00000566669 ZNF674Q2M3X9 581 aa18.34■□□□□ 0.53
UBFD1-206ENST00000566669 FAM74A4Q5TZK3 123 aa18.34■□□□□ 0.53
UBFD1-206ENST00000566669 KCNIP4Q6PIL6 250 aa18.34■□□□□ 0.53
UBFD1-206ENST00000566669 DAZ4Q86SG3 579 aaKnown RBP18.34■□□□□ 0.53
UBFD1-206ENST00000566669 C14orf178Q8N769 122 aaPredicted RBP18.34■□□□□ 0.53
UBFD1-206ENST00000566669 JPT2Q9H910 190 aa18.34■□□□□ 0.53
UBFD1-206ENST00000566669 DAZ3Q9NR90 486 aaKnown RBP18.34■□□□□ 0.53
UBFD1-206ENST00000566669 LTAP01374 205 aa18.32■□□□□ 0.52
UBFD1-206ENST00000566669 PLA2G1BP04054 148 aaKnown RBP18.32■□□□□ 0.52
UBFD1-206ENST00000566669 S100A9P06702 114 aaKnown RBP18.32■□□□□ 0.52
UBFD1-206ENST00000566669 Q6ZSA8 131 aa18.32■□□□□ 0.52
UBFD1-206ENST00000566669 NIT1Q86X76 327 aa18.32■□□□□ 0.52
UBFD1-206ENST00000566669 Q8N976 141 aa18.32■□□□□ 0.52
UBFD1-206ENST00000566669 RPL36AP83881 106 aaKnown RBP18.31■□□□□ 0.52
UBFD1-206ENST00000566669 RPL36ALQ969Q0 106 aaKnown RBP18.31■□□□□ 0.52
UBFD1-206ENST00000566669 A0A087WX48 190 aa18.3■□□□□ 0.52
UBFD1-206ENST00000566669 CST9LP1Q5W188 147 aa18.3■□□□□ 0.52
UBFD1-206ENST00000566669 Q8N3U1 123 aa18.3■□□□□ 0.52
UBFD1-206ENST00000566669 GRIFINA4D1Z8 144 aa18.29■□□□□ 0.52
UBFD1-206ENST00000566669 M0R381 172 aa18.29■□□□□ 0.52
UBFD1-206ENST00000566669 AKR1C3P42330 323 aa18.29■□□□□ 0.52
UBFD1-206ENST00000566669 FAM30AQ9NZY2 134 aa18.29■□□□□ 0.52
UBFD1-206ENST00000566669 ARPC5O15511 151 aa18.28■□□□□ 0.52
UBFD1-206ENST00000566669 HAMPP81172 84 aa18.28■□□□□ 0.52
UBFD1-206ENST00000566669 Q0VG73 95 aa18.28■□□□□ 0.52
UBFD1-206ENST00000566669 Q9UF83 564 aa18.28■□□□□ 0.52
UBFD1-206ENST00000566669 TRBV7-3A0A075B6L6 115 aa18.27■□□□□ 0.52
UBFD1-206ENST00000566669 A0A087WWL8 130 aa18.27■□□□□ 0.52
UBFD1-206ENST00000566669 CXCL1P09341 107 aa18.27■□□□□ 0.52
UBFD1-206ENST00000566669 WFDC2Q14508 124 aa18.27■□□□□ 0.52
UBFD1-206ENST00000566669 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.27■□□□□ 0.52
UBFD1-206ENST00000566669 FLG2Q5D862 2391 aaPredicted RBP18.27■□□□□ 0.52
UBFD1-206ENST00000566669 MYCBP2O75592 4640 aa18.27■□□□□ 0.51
UBFD1-206ENST00000566669 CYTL1Q9NRR1 136 aa18.26■□□□□ 0.51
UBFD1-206ENST00000566669 IGKV2D-24A0A075B6R9 120 aa18.25■□□□□ 0.51
UBFD1-206ENST00000566669 UMAD1C9J7I0 102 aa18.25■□□□□ 0.51
UBFD1-206ENST00000566669 PKIAP61925 76 aa18.25■□□□□ 0.51
UBFD1-206ENST00000566669 OR10G8Q8NGN5 311 aa18.25■□□□□ 0.51
UBFD1-206ENST00000566669 KLK12Q9UKR0 248 aa18.25■□□□□ 0.51
UBFD1-206ENST00000566669 LECT2O14960 151 aa18.24■□□□□ 0.51
UBFD1-206ENST00000566669 RAB4BP61018 213 aa18.24■□□□□ 0.51
UBFD1-206ENST00000566669 UBE2D3P61077 147 aa18.24■□□□□ 0.51
UBFD1-206ENST00000566669 UBE2D2P62837 147 aa18.24■□□□□ 0.51
UBFD1-206ENST00000566669 ATRAIDQ6UW56 229 aa18.24■□□□□ 0.51
UBFD1-206ENST00000566669 BAALCQ8WXS3 180 aa18.24■□□□□ 0.51
UBFD1-206ENST00000566669 IGLV2-33A0A075B6J2 118 aaPredicted RBP18.23■□□□□ 0.51
UBFD1-206ENST00000566669 TMSB15BA0A087X1C1 80 aa18.23■□□□□ 0.51
UBFD1-206ENST00000566669 RBFOX3A6NFN3 312 aa18.23■□□□□ 0.51
UBFD1-206ENST00000566669 G3V3Q6 166 aa18.23■□□□□ 0.51
UBFD1-206ENST00000566669 ZNF345Q14585 488 aa18.23■□□□□ 0.51
UBFD1-206ENST00000566669 RGS21Q2M5E4 152 aa18.23■□□□□ 0.51
UBFD1-206ENST00000566669 C14orf177Q52M58 125 aa18.23■□□□□ 0.51
UBFD1-206ENST00000566669 PFDN1O60925 122 aa18.22■□□□□ 0.51
UBFD1-206ENST00000566669 PAGE4O60829 102 aa18.21■□□□□ 0.51
UBFD1-206ENST00000566669 UBE2WQ96B02 151 aa18.21■□□□□ 0.51
UBFD1-206ENST00000566669 ZNF471Q9BX82 626 aaPredicted RBP18.21■□□□□ 0.51
UBFD1-206ENST00000566669 SFT2D1Q8WV19 159 aa18.2■□□□□ 0.5
UBFD1-206ENST00000566669 MBD3L1Q8WWY6 194 aa18.2■□□□□ 0.5
UBFD1-206ENST00000566669 TRBV6-8A0A0A6YYG3 113 aa18.19■□□□□ 0.5
UBFD1-206ENST00000566669 TMEM97Q5BJF2 176 aa18.19■□□□□ 0.5
UBFD1-206ENST00000566669 LINC00528Q8N1L1 170 aa18.19■□□□□ 0.5
UBFD1-206ENST00000566669 DEFB104AQ8WTQ1 72 aa18.19■□□□□ 0.5
UBFD1-206ENST00000566669 J3QL48 77 aa18.18■□□□□ 0.5
UBFD1-206ENST00000566669 KCNRGQ8N5I3 272 aa18.18■□□□□ 0.5
UBFD1-206ENST00000566669 OR5AL1P0C617 328 aa18.17■□□□□ 0.5
UBFD1-206ENST00000566669 ZNF56Q15929 161 aa18.17■□□□□ 0.5
UBFD1-206ENST00000566669 C1orf43Q9BWL3 253 aa18.17■□□□□ 0.5
UBFD1-206ENST00000566669 TMEM262E9PQX1 116 aa18.16■□□□□ 0.5
UBFD1-206ENST00000566669 CRPP02741 224 aa18.16■□□□□ 0.5
UBFD1-206ENST00000566669 EIF5AP63241 154 aaKnown RBP18.16■□□□□ 0.5
UBFD1-206ENST00000566669 PRR27Q6MZM9 219 aa18.16■□□□□ 0.5
UBFD1-206ENST00000566669 BAGE2Q86Y30 109 aa18.16■□□□□ 0.5
UBFD1-206ENST00000566669 MLST8Q9BVC4 326 aa18.16■□□□□ 0.5
UBFD1-206ENST00000566669 SSBP4Q9BWG4 385 aaPredicted RBP18.16■□□□□ 0.5
UBFD1-206ENST00000566669 SNAI2O43623 268 aa18.15■□□□□ 0.5
UBFD1-206ENST00000566669 FAM213BQ8TBF2 198 aa18.15■□□□□ 0.5
UBFD1-206ENST00000566669 A0A0D9SG52 128 aa18.14■□□□□ 0.49
UBFD1-206ENST00000566669 SPANXN1Q5VSR9 72 aa18.14■□□□□ 0.49
UBFD1-206ENST00000566669 CHAC1Q9BUX1 264 aa18.14■□□□□ 0.49
UBFD1-206ENST00000566669 HMSDA8MTL9 139 aa18.13■□□□□ 0.49
UBFD1-206ENST00000566669 NEXN-AS1Q8NBZ9 246 aa18.13■□□□□ 0.49
UBFD1-206ENST00000566669 OR10AG1Q8NH19 301 aa18.13■□□□□ 0.49
UBFD1-206ENST00000566669 KANTRA0A1W2PQU2 76 aa18.12■□□□□ 0.49
UBFD1-206ENST00000566669 SCXQ7RTU7 201 aa18.12■□□□□ 0.49
UBFD1-206ENST00000566669 SCO2A0A1W2PP80 73 aa18.11■□□□□ 0.49
UBFD1-206ENST00000566669 SMIM17P0DL12 118 aa18.11■□□□□ 0.49
UBFD1-206ENST00000566669 KRTAP29-1A8MX34 341 aaPredicted RBP18.1■□□□□ 0.49
UBFD1-206ENST00000566669 H2AFB1P0C5Y9 115 aa18.1■□□□□ 0.49
UBFD1-206ENST00000566669 MIAQ16674 131 aa18.1■□□□□ 0.49
UBFD1-206ENST00000566669 TMUB2Q71RG4 321 aa18.1■□□□□ 0.49
UBFD1-206ENST00000566669 DNAH8Q96JB1 4490 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms