RNA–Protein interactions for RNA: ENST00000564834.1

LINC01003-201, Transcript of long intergenic non-protein coding RNA 1003, humanhuman

BASIC

Gene LINC01003, Length 1,764 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01003-201ENST00000564834 RASL10AQ92737 203 aa18.42■□□□□ 0.54
LINC01003-201ENST00000564834 ZNF415Q09FC8 603 aa18.41■□□□□ 0.54
LINC01003-201ENST00000564834 LINC00173Q6ZV60 143 aa18.41■□□□□ 0.54
LINC01003-201ENST00000564834 PPP1R17O96001 155 aa18.4■□□□□ 0.54
LINC01003-201ENST00000564834 HBDP02042 147 aa18.4■□□□□ 0.54
LINC01003-201ENST00000564834 ZNF876PQ49A33 203 aa18.4■□□□□ 0.54
LINC01003-201ENST00000564834 WFDC10AQ9H1F0 79 aa18.4■□□□□ 0.54
LINC01003-201ENST00000564834 A0A087WWL8 130 aa18.4■□□□□ 0.54
LINC01003-201ENST00000564834 PKIAP61925 76 aa18.4■□□□□ 0.54
LINC01003-201ENST00000564834 C9orf66Q5T8R8 295 aa18.4■□□□□ 0.54
LINC01003-201ENST00000564834 VWFP04275 2813 aa18.39■□□□□ 0.54
LINC01003-201ENST00000564834 ZNF664Q8N3J9 261 aa18.39■□□□□ 0.53
LINC01003-201ENST00000564834 C20orf78Q9BR46 151 aa18.39■□□□□ 0.53
LINC01003-201ENST00000564834 NOTCH3Q9UM47 2321 aa18.39■□□□□ 0.53
LINC01003-201ENST00000564834 MAP1LC3CQ9BXW4 147 aa18.38■□□□□ 0.53
LINC01003-201ENST00000564834 TSTD3H0UI37 97 aa18.37■□□□□ 0.53
LINC01003-201ENST00000564834 SYS1-DBNDD2H3BUS1 97 aa18.37■□□□□ 0.53
LINC01003-201ENST00000564834 SUMO2P61956 95 aaKnown RBP18.37■□□□□ 0.53
LINC01003-201ENST00000564834 PIK3CD-AS1Q5SR53 167 aa18.37■□□□□ 0.53
LINC01003-201ENST00000564834 C1orf158Q8N1D5 194 aa18.37■□□□□ 0.53
LINC01003-201ENST00000564834 TMEM208Q9BTX3 173 aa18.37■□□□□ 0.53
LINC01003-201ENST00000564834 ZNF747Q9BV97 191 aa18.37■□□□□ 0.53
LINC01003-201ENST00000564834 CRYGDP07320 174 aa18.37■□□□□ 0.53
LINC01003-201ENST00000564834 C11orf72Q8NBR9 251 aa18.37■□□□□ 0.53
LINC01003-201ENST00000564834 RPL39LQ96EH5 51 aaKnown RBP18.37■□□□□ 0.53
LINC01003-201ENST00000564834 SMIM2Q9BVW6 85 aa18.37■□□□□ 0.53
LINC01003-201ENST00000564834 M0R2P5 195 aa18.36■□□□□ 0.53
LINC01003-201ENST00000564834 PRM2P04554 102 aa18.36■□□□□ 0.53
LINC01003-201ENST00000564834 FAM74A4Q5TZK3 123 aa18.36■□□□□ 0.53
LINC01003-201ENST00000564834 PTH2Q96A98 100 aa18.36■□□□□ 0.53
LINC01003-201ENST00000564834 SUMO4Q6EEV6 95 aa18.35■□□□□ 0.53
LINC01003-201ENST00000564834 SPATA3Q8NHX4 192 aa18.35■□□□□ 0.53
LINC01003-201ENST00000564834 F5H697 171 aa18.34■□□□□ 0.53
LINC01003-201ENST00000564834 FCER1GP30273 86 aa18.34■□□□□ 0.53
LINC01003-201ENST00000564834 SPXQ9BT56 116 aa18.34■□□□□ 0.53
LINC01003-201ENST00000564834 PRO1933Q9H354 126 aa18.34■□□□□ 0.53
LINC01003-201ENST00000564834 GIG44P09565 113 aaPredicted RBP18.33■□□□□ 0.53
LINC01003-201ENST00000564834 PET117Q6UWS5 81 aa18.33■□□□□ 0.53
LINC01003-201ENST00000564834 VAMP8Q9BV40 100 aa18.33■□□□□ 0.53
LINC01003-201ENST00000564834 LAGE3Q14657 143 aa18.32■□□□□ 0.52
LINC01003-201ENST00000564834 MORN3Q6PF18 240 aaPredicted RBP18.32■□□□□ 0.52
LINC01003-201ENST00000564834 SPATA12Q7Z6I5 190 aa18.32■□□□□ 0.52
LINC01003-201ENST00000564834 C1QTNF4Q9BXJ3 329 aa18.32■□□□□ 0.52
LINC01003-201ENST00000564834 NACAE9PAV3 2078 aa18.32■□□□□ 0.52
LINC01003-201ENST00000564834 RPL35AP18077 110 aaKnown RBP18.32■□□□□ 0.52
LINC01003-201ENST00000564834 ZNF56Q15929 161 aa18.32■□□□□ 0.52
LINC01003-201ENST00000564834 GTSCR1Q86UQ5 136 aa18.32■□□□□ 0.52
LINC01003-201ENST00000564834 IGHV3OR16-12A0A075B7B8 117 aa18.31■□□□□ 0.52
LINC01003-201ENST00000564834 C20orf202A1L168 122 aa18.31■□□□□ 0.52
LINC01003-201ENST00000564834 K7EMI3 77 aa18.31■□□□□ 0.52
LINC01003-201ENST00000564834 KIR2DL5BA0A0G2JN68 375 aa18.3■□□□□ 0.52
LINC01003-201ENST00000564834 KIR2DL5BA0A0G2JPC4 375 aa18.3■□□□□ 0.52
LINC01003-201ENST00000564834 RPL32P62910 135 aaKnown RBP18.3■□□□□ 0.52
LINC01003-201ENST00000564834 KIR2DL5AQ8N109 375 aa18.3■□□□□ 0.52
LINC01003-201ENST00000564834 MCRIP2Q9BUT9 160 aaKnown RBP18.3■□□□□ 0.52
LINC01003-201ENST00000564834 A8MWV9 139 aa18.3■□□□□ 0.52
LINC01003-201ENST00000564834 GOLT1BQ9Y3E0 138 aa18.3■□□□□ 0.52
LINC01003-201ENST00000564834 TCAPO15273 167 aa18.29■□□□□ 0.52
LINC01003-201ENST00000564834 TMEM158Q8WZ71 300 aa18.29■□□□□ 0.52
LINC01003-201ENST00000564834 ST20Q9HBF5 79 aa18.29■□□□□ 0.52
LINC01003-201ENST00000564834 AZU1P20160 251 aa18.28■□□□□ 0.52
LINC01003-201ENST00000564834 KRTAP24-1Q3LI83 254 aa18.28■□□□□ 0.52
LINC01003-201ENST00000564834 PAM16Q9Y3D7 125 aa18.28■□□□□ 0.52
LINC01003-201ENST00000564834 M0QY20 66 aa18.27■□□□□ 0.52
LINC01003-201ENST00000564834 IL17DQ8TAD2 202 aa18.27■□□□□ 0.52
LINC01003-201ENST00000564834 RNASE8Q8TDE3 154 aaKnown RBP18.27■□□□□ 0.52
LINC01003-201ENST00000564834 TMEM263Q8WUH6 116 aaKnown RBP18.27■□□□□ 0.52
LINC01003-201ENST00000564834 NDUFAF3Q9BU61 184 aa18.27■□□□□ 0.52
LINC01003-201ENST00000564834 TRBV6-5A0A0K0K1A5 114 aa18.27■□□□□ 0.51
LINC01003-201ENST00000564834 LINC00587B1AMM8 73 aa18.27■□□□□ 0.51
LINC01003-201ENST00000564834 ORMDL2Q53FV1 153 aa18.27■□□□□ 0.51
LINC01003-201ENST00000564834 LINC01545Q5VT33 79 aa18.27■□□□□ 0.51
LINC01003-201ENST00000564834 WFDC9Q8NEX5 89 aa18.27■□□□□ 0.51
LINC01003-201ENST00000564834 IFI27L1Q96BM0 104 aa18.27■□□□□ 0.51
LINC01003-201ENST00000564834 CSTL1Q9H114 145 aa18.27■□□□□ 0.51
LINC01003-201ENST00000564834 ATOH7Q8N100 152 aa18.26■□□□□ 0.51
LINC01003-201ENST00000564834 CSNK1G2-AS1Q8NCQ2 148 aa18.26■□□□□ 0.51
LINC01003-201ENST00000564834 EDA2RQ9HAV5 297 aa18.26■□□□□ 0.51
LINC01003-201ENST00000564834 H0Y8G0 127 aa18.25■□□□□ 0.51
LINC01003-201ENST00000564834 POLR2KP53803 58 aaKnown RBP18.25■□□□□ 0.51
LINC01003-201ENST00000564834 UFSP1Q6NVU6 142 aa18.25■□□□□ 0.51
LINC01003-201ENST00000564834 DDTP30046 118 aa18.24■□□□□ 0.51
LINC01003-201ENST00000564834 MRPL16Q9NX20 251 aaKnown RBP18.24■□□□□ 0.51
LINC01003-201ENST00000564834 NUDT3O95989 172 aa18.23■□□□□ 0.51
LINC01003-201ENST00000564834 H7C1H1 209 aa18.22■□□□□ 0.51
LINC01003-201ENST00000564834 CFAP126Q5VTH2 177 aa18.22■□□□□ 0.51
LINC01003-201ENST00000564834 TRAV9-2A0A087WT02 112 aa18.22■□□□□ 0.51
LINC01003-201ENST00000564834 SDHAF1A6NFY7 115 aa18.22■□□□□ 0.51
LINC01003-201ENST00000564834 RHODO00212 210 aa18.22■□□□□ 0.51
LINC01003-201ENST00000564834 SPATA45Q537H7 98 aa18.22■□□□□ 0.51
LINC01003-201ENST00000564834 ZNF705AQ6ZN79 300 aaPredicted RBP18.22■□□□□ 0.51
LINC01003-201ENST00000564834 C18orf15Q96N68 181 aa18.22■□□□□ 0.51
LINC01003-201ENST00000564834 TRRAPQ9Y4A5 3859 aa18.21■□□□□ 0.51
LINC01003-201ENST00000564834 VCYO14598 125 aa18.21■□□□□ 0.51
LINC01003-201ENST00000564834 WIPF1O43516 503 aa18.21■□□□□ 0.51
LINC01003-201ENST00000564834 TRBV27A0A0K0K1C4 114 aa18.2■□□□□ 0.5
LINC01003-201ENST00000564834 ATP5LO75964 103 aa18.2■□□□□ 0.5
LINC01003-201ENST00000564834 LGALS9BQ3B8N2 356 aa18.2■□□□□ 0.5
LINC01003-201ENST00000564834 LGALS9CQ6DKI2 356 aa18.2■□□□□ 0.5
LINC01003-201ENST00000564834 C16orf74Q96GX8 76 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms