RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 A4D1N5 150 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 RBAKDNA6NC62 111 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 IZUMO1RA6ND01 250 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 A8MWP6 167 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 H3BRN7 92 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 K7EN84 100 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 PHOX2AO14813 284 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 EIF3GO75821 320 aaKnown RBP eCLIP2.31□□□□□ -2.04
SPG11-225ENST00000561391 LTAP01374 205 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 APCSP02743 223 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 IL4P05112 153 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 CTSGP08311 255 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 IGLC2P0DOY2 106 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 PYYP10082 97 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 CRISP2P16562 243 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 FOXA3P55318 350 aaPredicted RBP2.31□□□□□ -2.04
SPG11-225ENST00000561391 TPPP2P59282 170 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 RPS20P60866 119 aaKnown RBP2.31□□□□□ -2.04
SPG11-225ENST00000561391 RHOGP84095 191 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 IQCJQ1A5X6 159 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 C15orf32Q32M92 178 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 LGALS9BQ3B8N2 356 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 LDLRAD2Q5SZI1 272 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 C1orf134Q5TEV5 83 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 ZC2HC1BQ5TFG8 222 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 COX8CQ7Z4L0 72 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 SPATA12Q7Z6I5 190 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 BAGE3Q86Y29 109 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 OR8I2Q8N0Y5 310 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 HIST3H2BBQ8N257 126 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 Q8N9W7 124 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 BLNKQ8WV28 456 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 MRPL53Q96EL3 112 aaKnown RBP2.31□□□□□ -2.04
SPG11-225ENST00000561391 ZNF414Q96IQ9 312 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 IGF2BP2-AS1Q96M15 143 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 LINC00479Q96M42 142 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 FAM218AQ96MZ4 157 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 METTL26Q96S19 204 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 OPRPNQ99935 248 aaPredicted RBP2.31□□□□□ -2.04
SPG11-225ENST00000561391 SLC50A1Q9BRV3 221 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 NDFIP1Q9BT67 221 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 DERL1Q9BUN8 251 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 Q9H3A6 140 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 RPP21Q9H633 154 aaKnown RBP2.31□□□□□ -2.04
SPG11-225ENST00000561391 NIT2Q9NQR4 276 aa2.31□□□□□ -2.04
SPG11-225ENST00000561391 VPS13BQ7Z7G8 4022 aa2.3□□□□□ -2.04
SPG11-225ENST00000561391 A0A087WZ39 114 aa2.3□□□□□ -2.04
SPG11-225ENST00000561391 A0A087X0K7 114 aa2.3□□□□□ -2.04
SPG11-225ENST00000561391 NDUFAF8A1L188 74 aa2.3□□□□□ -2.04
SPG11-225ENST00000561391 F2Z2F3 143 aa2.3□□□□□ -2.04
SPG11-225ENST00000561391 TSTD3H0UI37 97 aa2.3□□□□□ -2.04
SPG11-225ENST00000561391 K7EMT4 169 aa2.3□□□□□ -2.04
SPG11-225ENST00000561391 OR2J3O76001 311 aa2.3□□□□□ -2.04
SPG11-225ENST00000561391 IGLV2-8P01709 118 aa2.3□□□□□ -2.04
SPG11-225ENST00000561391 IGHV3-48P01763 117 aa2.3□□□□□ -2.04
SPG11-225ENST00000561391 IGHG2P01859 326 aa2.3□□□□□ -2.04
SPG11-225ENST00000561391 OR5AL1P0C617 328 aa2.3□□□□□ -2.04
SPG11-225ENST00000561391 APELAP0DMC3 54 aa2.3□□□□□ -2.04
SPG11-225ENST00000561391 ESDP10768 282 aa2.3□□□□□ -2.04
SPG11-225ENST00000561391 FABP4P15090 132 aa2.3□□□□□ -2.04
SPG11-225ENST00000561391 PMCHP20382 165 aa2.3□□□□□ -2.04
SPG11-225ENST00000561391 RAB4BP61018 213 aa2.3□□□□□ -2.04
SPG11-225ENST00000561391 RIGQ13278 110 aa2.3□□□□□ -2.04
SPG11-225ENST00000561391 JOSD1Q15040 202 aaPredicted RBP2.3□□□□□ -2.04
SPG11-225ENST00000561391 PSG3Q16557 428 aa2.3□□□□□ -2.04
SPG11-225ENST00000561391 PSMG4Q5JS54 123 aa2.3□□□□□ -2.04
SPG11-225ENST00000561391 SIGLEC15Q6ZMC9 328 aa2.3□□□□□ -2.04
SPG11-225ENST00000561391 C19orf35Q6ZS72 473 aa2.3□□□□□ -2.04
SPG11-225ENST00000561391 PRNTQ86SH4 94 aa2.3□□□□□ -2.04
SPG11-225ENST00000561391 GTSCR1Q86UQ5 136 aa2.3□□□□□ -2.04
SPG11-225ENST00000561391 DEFB125Q8N687 156 aa2.3□□□□□ -2.04
SPG11-225ENST00000561391 POM121L12Q8N7R1 296 aa2.3□□□□□ -2.04
SPG11-225ENST00000561391 C5orf56Q8N8D9 126 aa2.3□□□□□ -2.04
SPG11-225ENST00000561391 OR10D4PQ8NGN7 298 aa2.3□□□□□ -2.04
SPG11-225ENST00000561391 ZNF502Q8TBZ5 544 aa2.3□□□□□ -2.04
SPG11-225ENST00000561391 HIST1H2BLQ99880 126 aa2.3□□□□□ -2.04
SPG11-225ENST00000561391 RNASE7Q9H1E1 156 aaKnown RBP2.3□□□□□ -2.04
SPG11-225ENST00000561391 ZNF586Q9NXT0 402 aa2.3□□□□□ -2.04
SPG11-225ENST00000561391 MRPL36Q9P0J6 103 aaKnown RBP2.3□□□□□ -2.04
SPG11-225ENST00000561391 PSG8Q9UQ74 426 aa2.3□□□□□ -2.04
SPG11-225ENST00000561391 LENEPQ9Y5L5 61 aa2.3□□□□□ -2.04
SPG11-225ENST00000561391 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.29□□□□□ -2.04
SPG11-225ENST00000561391 IGHV3-21A0A0B4J1V1 117 aa2.29□□□□□ -2.04
SPG11-225ENST00000561391 TRBV7-9A0A0J9YWB2 115 aa2.29□□□□□ -2.04
SPG11-225ENST00000561391 A0A1B0GUT8 65 aa2.29□□□□□ -2.04
SPG11-225ENST00000561391 TMEM189A5PLL7 270 aa2.29□□□□□ -2.04
SPG11-225ENST00000561391 C19orf71A6NCJ1 209 aa2.29□□□□□ -2.04
SPG11-225ENST00000561391 OR2T8A6NH00 312 aa2.29□□□□□ -2.04
SPG11-225ENST00000561391 FABP5P3A8MUU1 101 aa2.29□□□□□ -2.04
SPG11-225ENST00000561391 HIGD1CA8MV81 97 aa2.29□□□□□ -2.04
SPG11-225ENST00000561391 H7C423 109 aa2.29□□□□□ -2.04
SPG11-225ENST00000561391 SLC17A3O00476 420 aa2.29□□□□□ -2.04
SPG11-225ENST00000561391 NDUFA4O00483 81 aa2.29□□□□□ -2.04
SPG11-225ENST00000561391 CHEK1O14757 476 aa2.29□□□□□ -2.04
SPG11-225ENST00000561391 MRPS12O15235 138 aaKnown RBP2.29□□□□□ -2.04
SPG11-225ENST00000561391 PPBPP02775 128 aa2.29□□□□□ -2.04
SPG11-225ENST00000561391 TRGV3P03979 118 aa2.29□□□□□ -2.04
SPG11-225ENST00000561391 CBLN1P23435 193 aa2.29□□□□□ -2.04
SPG11-225ENST00000561391 GPR183P32249 361 aa2.29□□□□□ -2.04
SPG11-225ENST00000561391 ID1P41134 155 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms