RNA–Protein interactions for RNA: ENST00000560986.1

HMG20A-212, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 747 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-212ENST00000560986 AP1S3Q96PC3 154 aa4.19□□□□□ -1.74
HMG20A-212ENST00000560986 DUX5Q96PT3 197 aa4.19□□□□□ -1.74
HMG20A-212ENST00000560986 C20orf78Q9BR46 151 aa4.19□□□□□ -1.74
HMG20A-212ENST00000560986 C1QTNF4Q9BXJ3 329 aa4.19□□□□□ -1.74
HMG20A-212ENST00000560986 EDA2RQ9HAV5 297 aa4.19□□□□□ -1.74
HMG20A-212ENST00000560986 NAGKQ9UJ70 344 aa4.19□□□□□ -1.74
HMG20A-212ENST00000560986 HSPB8Q9UJY1 196 aa4.19□□□□□ -1.74
HMG20A-212ENST00000560986 FLNAP21333 2647 aaKnown RBP4.19□□□□□ -1.74
HMG20A-212ENST00000560986 CSMD2Q7Z408 3487 aa4.19□□□□□ -1.74
HMG20A-212ENST00000560986 TEX15Q9BXT5 2789 aa4.19□□□□□ -1.74
HMG20A-212ENST00000560986 ZANQ9Y493 2812 aa4.18□□□□□ -1.74
HMG20A-212ENST00000560986 GRIFINA4D1Z8 144 aa4.18□□□□□ -1.74
HMG20A-212ENST00000560986 H3BMM0 161 aa4.18□□□□□ -1.74
HMG20A-212ENST00000560986 CIDEAO60543 219 aa4.18□□□□□ -1.74
HMG20A-212ENST00000560986 SPINK4O60575 86 aa4.18□□□□□ -1.74
HMG20A-212ENST00000560986 IGLV1-51P01701 117 aa4.18□□□□□ -1.74
HMG20A-212ENST00000560986 ZNF688P0C7X2 276 aa4.18□□□□□ -1.74
HMG20A-212ENST00000560986 GZMBP10144 247 aa4.18□□□□□ -1.74
HMG20A-212ENST00000560986 CKS2P33552 79 aa4.18□□□□□ -1.74
HMG20A-212ENST00000560986 RPL24P83731 157 aaKnown RBP4.18□□□□□ -1.74
HMG20A-212ENST00000560986 PYY3Q5JQD4 70 aa4.18□□□□□ -1.74
HMG20A-212ENST00000560986 SPANXN1Q5VSR9 72 aa4.18□□□□□ -1.74
HMG20A-212ENST00000560986 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.18□□□□□ -1.74
HMG20A-212ENST00000560986 AMTNQ6UX39 209 aa4.18□□□□□ -1.74
HMG20A-212ENST00000560986 ADAMTSL5Q6ZMM2 481 aa4.18□□□□□ -1.74
HMG20A-212ENST00000560986 TMEM61Q8N0U2 210 aa4.18□□□□□ -1.74
HMG20A-212ENST00000560986 MCRIP2Q9BUT9 160 aaKnown RBP4.18□□□□□ -1.74
HMG20A-212ENST00000560986 MAP1LC3AQ9H492 121 aa4.18□□□□□ -1.74
HMG20A-212ENST00000560986 DPH3P1Q9H4G8 78 aa4.18□□□□□ -1.74
HMG20A-212ENST00000560986 ZNF256Q9Y2P7 627 aaPredicted RBP4.18□□□□□ -1.74
HMG20A-212ENST00000560986 PHLDA3Q9Y5J5 127 aa4.18□□□□□ -1.74
HMG20A-212ENST00000560986 CCDC168Q8NDH2 2452 aa4.18□□□□□ -1.74
HMG20A-212ENST00000560986 CELSR1Q9NYQ6 3014 aa4.18□□□□□ -1.74
HMG20A-212ENST00000560986 HIVEP2P31629 2446 aa4.17□□□□□ -1.74
HMG20A-212ENST00000560986 VPS13CQ709C8 3753 aa4.17□□□□□ -1.74
HMG20A-212ENST00000560986 IGHV1OR15-1A0A075B7D0 117 aa4.17□□□□□ -1.74
HMG20A-212ENST00000560986 TSTD3H0UI37 97 aa4.17□□□□□ -1.74
HMG20A-212ENST00000560986 GFI1BQ5VTD9 330 aa4.17□□□□□ -1.74
HMG20A-212ENST00000560986 MORN3Q6PF18 240 aaPredicted RBP4.17□□□□□ -1.74
HMG20A-212ENST00000560986 FA2HQ7L5A8 372 aa4.17□□□□□ -1.74
HMG20A-212ENST00000560986 MRPL52Q86TS9 123 aaKnown RBP4.17□□□□□ -1.74
HMG20A-212ENST00000560986 OR10AG1Q8NH19 301 aa4.17□□□□□ -1.74
HMG20A-212ENST00000560986 C9orf85Q96MD7 179 aa4.17□□□□□ -1.74
HMG20A-212ENST00000560986 PRELID3AQ96N28 172 aa4.17□□□□□ -1.74
HMG20A-212ENST00000560986 CITED2Q99967 270 aaPredicted RBP4.17□□□□□ -1.74
HMG20A-212ENST00000560986 SPXQ9BT56 116 aa4.17□□□□□ -1.74
HMG20A-212ENST00000560986 TPPP3Q9BW30 176 aa4.17□□□□□ -1.74
HMG20A-212ENST00000560986 NIT2Q9NQR4 276 aa4.17□□□□□ -1.74
HMG20A-212ENST00000560986 ITPR2Q14571 2701 aa4.17□□□□□ -1.74
HMG20A-212ENST00000560986 MYO9AB2RTY4 2548 aa4.17□□□□□ -1.74
HMG20A-212ENST00000560986 GCN1Q92616 2671 aaKnown RBP4.17□□□□□ -1.74
HMG20A-212ENST00000560986 TRBV6-5A0A0K0K1A5 114 aa4.16□□□□□ -1.74
HMG20A-212ENST00000560986 OR11H12B2RN74 326 aa4.16□□□□□ -1.74
HMG20A-212ENST00000560986 D6R8Y8 96 aa4.16□□□□□ -1.74
HMG20A-212ENST00000560986 H7C1H1 209 aa4.16□□□□□ -1.74
HMG20A-212ENST00000560986 LEPROTL1O95214 131 aa4.16□□□□□ -1.74
HMG20A-212ENST00000560986 INSP01308 110 aa4.16□□□□□ -1.74
HMG20A-212ENST00000560986 FRMD6-AS1P0C7T7 363 aa4.16□□□□□ -1.74
HMG20A-212ENST00000560986 SMIM17P0DL12 118 aa4.16□□□□□ -1.74
HMG20A-212ENST00000560986 CD28P10747 220 aa4.16□□□□□ -1.74
HMG20A-212ENST00000560986 RNASE3P12724 160 aaKnown RBP4.16□□□□□ -1.74
HMG20A-212ENST00000560986 RNASE4P34096 147 aaKnown RBP4.16□□□□□ -1.74
HMG20A-212ENST00000560986 PKIAP61925 76 aa4.16□□□□□ -1.74
HMG20A-212ENST00000560986 KIAA1644Q3SXP7 199 aa4.16□□□□□ -1.74
HMG20A-212ENST00000560986 MRPL51Q4U2R6 128 aaKnown RBP4.16□□□□□ -1.74
HMG20A-212ENST00000560986 KRTAP5-11Q6L8G4 156 aa4.16□□□□□ -1.74
HMG20A-212ENST00000560986 PET117Q6UWS5 81 aa4.16□□□□□ -1.74
HMG20A-212ENST00000560986 TEX43Q6ZNM6 134 aa4.16□□□□□ -1.74
HMG20A-212ENST00000560986 NIT1Q86X76 327 aa4.16□□□□□ -1.74
HMG20A-212ENST00000560986 AMN1Q8IY45 258 aa4.16□□□□□ -1.74
HMG20A-212ENST00000560986 RNF185Q96GF1 192 aa4.16□□□□□ -1.74
HMG20A-212ENST00000560986 TMEM70Q9BUB7 260 aa4.16□□□□□ -1.74
HMG20A-212ENST00000560986 KRTAP2-2Q9BYT5 123 aa4.16□□□□□ -1.74
HMG20A-212ENST00000560986 ZMAT5Q9UDW3 170 aaKnown RBP4.16□□□□□ -1.74
HMG20A-212ENST00000560986 MAP1AP78559 2803 aaPredicted RBP4.16□□□□□ -1.74
HMG20A-212ENST00000560986 TMSB15BA0A087X1C1 80 aa4.15□□□□□ -1.75
HMG20A-212ENST00000560986 IGHV3-16A0A0C4DH30 117 aa4.15□□□□□ -1.75
HMG20A-212ENST00000560986 A8MWV9 139 aa4.15□□□□□ -1.75
HMG20A-212ENST00000560986 H3BVH4 76 aa4.15□□□□□ -1.75
HMG20A-212ENST00000560986 M0R2Z0 102 aa4.15□□□□□ -1.75
HMG20A-212ENST00000560986 HBDP02042 147 aa4.15□□□□□ -1.75
HMG20A-212ENST00000560986 DEFB131AP59861 70 aa4.15□□□□□ -1.75
HMG20A-212ENST00000560986 ZNF415Q09FC8 603 aa4.15□□□□□ -1.75
HMG20A-212ENST00000560986 GAGE5Q13069 117 aa4.15□□□□□ -1.75
HMG20A-212ENST00000560986 GAGE6Q13070 117 aa4.15□□□□□ -1.75
HMG20A-212ENST00000560986 DEFB136Q30KP8 78 aa4.15□□□□□ -1.75
HMG20A-212ENST00000560986 ORMDL2Q53FV1 153 aa4.15□□□□□ -1.75
HMG20A-212ENST00000560986 LBHQ53QV2 105 aaPredicted RBP4.15□□□□□ -1.75
HMG20A-212ENST00000560986 PDZD11Q5EBL8 140 aa4.15□□□□□ -1.75
HMG20A-212ENST00000560986 PRR9Q5T870 116 aa4.15□□□□□ -1.75
HMG20A-212ENST00000560986 C9orf66Q5T8R8 295 aa4.15□□□□□ -1.75
HMG20A-212ENST00000560986 RNASEKQ6P5S7 137 aaKnown RBP4.15□□□□□ -1.75
HMG20A-212ENST00000560986 TRPT1Q86TN4 253 aaKnown RBP4.15□□□□□ -1.75
HMG20A-212ENST00000560986 Q8N8P6 123 aa4.15□□□□□ -1.75
HMG20A-212ENST00000560986 RCHY1Q96PM5 261 aa4.15□□□□□ -1.75
HMG20A-212ENST00000560986 MAP1LC3CQ9BXW4 147 aa4.15□□□□□ -1.75
HMG20A-212ENST00000560986 SVEP1Q4LDE5 3571 aa4.14□□□□□ -1.75
HMG20A-212ENST00000560986 IGKV3-7A0A075B6H7 116 aa4.14□□□□□ -1.75
HMG20A-212ENST00000560986 IGKV2D-30A0A075B6S6 120 aa4.14□□□□□ -1.75
HMG20A-212ENST00000560986 IGHV1-24A0A0C4DH33 117 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms