RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 SCGB3A1Q96QR1 104 aa7.19□□□□□ -1.26
RTF1-206ENST00000560447 KIR2DL4Q99706 377 aa7.19□□□□□ -1.26
RTF1-206ENST00000560447 CYSLTR1Q9Y271 337 aa7.19□□□□□ -1.26
RTF1-206ENST00000560447 H3BMM0 161 aa7.18□□□□□ -1.26
RTF1-206ENST00000560447 SLURP1P55000 103 aa7.18□□□□□ -1.26
RTF1-206ENST00000560447 TAL2Q16559 108 aa7.18□□□□□ -1.26
RTF1-206ENST00000560447 SUMO4Q6EEV6 95 aa7.18□□□□□ -1.26
RTF1-206ENST00000560447 Q6ZSV7 163 aa7.18□□□□□ -1.26
RTF1-206ENST00000560447 TRPT1Q86TN4 253 aaKnown RBP7.18□□□□□ -1.26
RTF1-206ENST00000560447 Q8N1Y9 231 aa7.18□□□□□ -1.26
RTF1-206ENST00000560447 NEXN-AS1Q8NBZ9 246 aa7.18□□□□□ -1.26
RTF1-206ENST00000560447 OR11H1Q8NG94 326 aa7.18□□□□□ -1.26
RTF1-206ENST00000560447 DYNLRB2Q8TF09 96 aa7.18□□□□□ -1.26
RTF1-206ENST00000560447 RPL39LQ96EH5 51 aaKnown RBP7.18□□□□□ -1.26
RTF1-206ENST00000560447 TIMM17AQ99595 171 aa7.18□□□□□ -1.26
RTF1-206ENST00000560447 CSTL1Q9H114 145 aa7.18□□□□□ -1.26
RTF1-206ENST00000560447 C16orf95Q9H693 158 aa7.18□□□□□ -1.26
RTF1-206ENST00000560447 TMEM160Q9NX00 188 aa7.18□□□□□ -1.26
RTF1-206ENST00000560447 FAM208BQ5VWN6 2430 aa7.18□□□□□ -1.26
RTF1-206ENST00000560447 FBN2P35556 2912 aa7.17□□□□□ -1.26
RTF1-206ENST00000560447 CELSR2Q9HCU4 2923 aa7.17□□□□□ -1.26
RTF1-206ENST00000560447 LRRK2Q5S007 2527 aa7.17□□□□□ -1.26
RTF1-206ENST00000560447 DNAJC9-AS1A6NH13 148 aa7.17□□□□□ -1.26
RTF1-206ENST00000560447 FHL3Q13643 280 aa7.17□□□□□ -1.26
RTF1-206ENST00000560447 SPINK13Q1W4C9 94 aa7.17□□□□□ -1.26
RTF1-206ENST00000560447 NSUN5P1Q3KNT7 163 aa7.17□□□□□ -1.26
RTF1-206ENST00000560447 ZC2HC1BQ5TFG8 222 aa7.17□□□□□ -1.26
RTF1-206ENST00000560447 MRPL35Q9NZE8 188 aaKnown RBP7.17□□□□□ -1.26
RTF1-206ENST00000560447 CHTOPQ9Y3Y2 248 aaKnown RBP7.17□□□□□ -1.26
RTF1-206ENST00000560447 A8MWV9 139 aa7.16□□□□□ -1.26
RTF1-206ENST00000560447 H3BRM9 83 aa7.16□□□□□ -1.26
RTF1-206ENST00000560447 J3QKU1 62 aa7.16□□□□□ -1.26
RTF1-206ENST00000560447 TAX1BP3O14907 124 aa7.16□□□□□ -1.26
RTF1-206ENST00000560447 CRYGDP07320 174 aa7.16□□□□□ -1.26
RTF1-206ENST00000560447 RNASE1P07998 156 aaKnown RBP7.16□□□□□ -1.26
RTF1-206ENST00000560447 NPSP0C0P6 89 aa7.16□□□□□ -1.26
RTF1-206ENST00000560447 NMUP48645 174 aa7.16□□□□□ -1.26
RTF1-206ENST00000560447 DEFB131AP59861 70 aa7.16□□□□□ -1.26
RTF1-206ENST00000560447 ZNF415Q09FC8 603 aa7.16□□□□□ -1.26
RTF1-206ENST00000560447 UBE2V1Q13404 147 aa7.16□□□□□ -1.26
RTF1-206ENST00000560447 DEFB114Q30KQ6 69 aa7.16□□□□□ -1.26
RTF1-206ENST00000560447 ZFP2Q6ZN57 461 aa7.16□□□□□ -1.26
RTF1-206ENST00000560447 KLHL30-AS1Q8NEE0 82 aa7.16□□□□□ -1.26
RTF1-206ENST00000560447 RAX2Q96IS3 184 aa7.16□□□□□ -1.26
RTF1-206ENST00000560447 SPXQ9BT56 116 aa7.16□□□□□ -1.26
RTF1-206ENST00000560447 MAP6D1Q9H9H5 199 aa7.16□□□□□ -1.26
RTF1-206ENST00000560447 CREBBPQ92793 2442 aa7.16□□□□□ -1.26
RTF1-206ENST00000560447 CSMD1Q96PZ7 3565 aa7.15□□□□□ -1.26
RTF1-206ENST00000560447 VPS13CQ709C8 3753 aa7.15□□□□□ -1.26
RTF1-206ENST00000560447 SDHAF1A6NFY7 115 aa7.15□□□□□ -1.26
RTF1-206ENST00000560447 CBY3A6NI87 242 aa7.15□□□□□ -1.26
RTF1-206ENST00000560447 F5H697 171 aa7.15□□□□□ -1.26
RTF1-206ENST00000560447 M0QY20 66 aa7.15□□□□□ -1.26
RTF1-206ENST00000560447 RHODO00212 210 aa7.15□□□□□ -1.26
RTF1-206ENST00000560447 PLA2G2AP14555 144 aa7.15□□□□□ -1.26
RTF1-206ENST00000560447 TMEM61Q8N0U2 210 aa7.15□□□□□ -1.26
RTF1-206ENST00000560447 WFDC11Q8NEX6 87 aa7.15□□□□□ -1.26
RTF1-206ENST00000560447 BAALCQ8WXS3 180 aa7.15□□□□□ -1.26
RTF1-206ENST00000560447 DLX4Q92988 240 aaPredicted RBP7.15□□□□□ -1.26
RTF1-206ENST00000560447 MDFICQ9P1T7 246 aa7.15□□□□□ -1.26
RTF1-206ENST00000560447 USP9YO00507 2555 aaPredicted RBP7.15□□□□□ -1.26
RTF1-206ENST00000560447 NAV2Q8IVL1 2488 aa7.15□□□□□ -1.27
RTF1-206ENST00000560447 TRAV12-2A0A075B6T6 113 aa7.14□□□□□ -1.27
RTF1-206ENST00000560447 IGIPA6NJ69 53 aa7.14□□□□□ -1.27
RTF1-206ENST00000560447 M0R2P5 195 aa7.14□□□□□ -1.27
RTF1-206ENST00000560447 INSP01308 110 aa7.14□□□□□ -1.27
RTF1-206ENST00000560447 CRYBA4P53673 196 aa7.14□□□□□ -1.27
RTF1-206ENST00000560447 ZNF56Q15929 161 aa7.14□□□□□ -1.27
RTF1-206ENST00000560447 ZNF124Q15973 351 aa7.14□□□□□ -1.27
RTF1-206ENST00000560447 ZNF876PQ49A33 203 aa7.14□□□□□ -1.27
RTF1-206ENST00000560447 CRYBG3Q68DQ2 2970 aa7.14□□□□□ -1.27
RTF1-206ENST00000560447 PCP2Q8IVA1 136 aa7.14□□□□□ -1.27
RTF1-206ENST00000560447 FAM110AQ9BQ89 295 aa7.14□□□□□ -1.27
RTF1-206ENST00000560447 TSSC4Q9Y5U2 329 aaPredicted RBP7.14□□□□□ -1.27
RTF1-206ENST00000560447 CELSR1Q9NYQ6 3014 aa7.14□□□□□ -1.27
RTF1-206ENST00000560447 PTPN13Q12923 2485 aa7.13□□□□□ -1.27
RTF1-206ENST00000560447 OR11H12B2RN74 326 aa7.13□□□□□ -1.27
RTF1-206ENST00000560447 E9PLD3 99 aa7.13□□□□□ -1.27
RTF1-206ENST00000560447 NDUFA7O95182 113 aa7.13□□□□□ -1.27
RTF1-206ENST00000560447 IGKV3-20P01619 116 aa7.13□□□□□ -1.27
RTF1-206ENST00000560447 PTTG1IPP53801 180 aa7.13□□□□□ -1.27
RTF1-206ENST00000560447 HERVK_113P61574 105 aa7.13□□□□□ -1.27
RTF1-206ENST00000560447 KRTAP1-1Q07627 177 aa7.13□□□□□ -1.27
RTF1-206ENST00000560447 PMVKQ15126 192 aa7.13□□□□□ -1.27
RTF1-206ENST00000560447 DEFB136Q30KP8 78 aa7.13□□□□□ -1.27
RTF1-206ENST00000560447 KHDC1LQ5JSQ8 128 aa7.13□□□□□ -1.27
RTF1-206ENST00000560447 C18orf65Q6ZTR6 163 aa7.13□□□□□ -1.27
RTF1-206ENST00000560447 GTSCR1Q86UQ5 136 aa7.13□□□□□ -1.27
RTF1-206ENST00000560447 OR11H2Q8NH07 326 aa7.13□□□□□ -1.27
RTF1-206ENST00000560447 DNAJC30Q96LL9 226 aa7.13□□□□□ -1.27
RTF1-206ENST00000560447 TM2D2Q9BX73 214 aa7.13□□□□□ -1.27
RTF1-206ENST00000560447 TRBV25-1A0A075B6N4 114 aa7.12□□□□□ -1.27
RTF1-206ENST00000560447 A0A087WWL8 130 aa7.12□□□□□ -1.27
RTF1-206ENST00000560447 IGKV2D-26A0A0A0MRZ7 120 aa7.12□□□□□ -1.27
RTF1-206ENST00000560447 PRSS29PA6NIE9 313 aa7.12□□□□□ -1.27
RTF1-206ENST00000560447 KNCNA6PVL3 124 aa7.12□□□□□ -1.27
RTF1-206ENST00000560447 I3L3M4 83 aa7.12□□□□□ -1.27
RTF1-206ENST00000560447 VAMP3Q15836 100 aa7.12□□□□□ -1.27
RTF1-206ENST00000560447 BEAN1Q3B7T3 259 aa7.12□□□□□ -1.27
RTF1-206ENST00000560447 KRTAP19-1Q8IUB9 90 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms