RNA–Protein interactions for RNA: ENST00000559329.5

USP8-208, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,917 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-208ENST00000559329 C16orf95Q9H693 158 aa11.75□□□□□ -0.53
USP8-208ENST00000559329 SORL1Q92673 2214 aa11.75□□□□□ -0.53
USP8-208ENST00000559329 HINT1P49773 126 aaPredicted RBP11.74□□□□□ -0.53
USP8-208ENST00000559329 SUMO4Q6EEV6 95 aa11.74□□□□□ -0.53
USP8-208ENST00000559329 DYNLRB2Q8TF09 96 aa11.74□□□□□ -0.53
USP8-208ENST00000559329 MAP6D1Q9H9H5 199 aa11.74□□□□□ -0.53
USP8-208ENST00000559329 CUBNO60494 3623 aa11.74□□□□□ -0.53
USP8-208ENST00000559329 NUDT3O95989 172 aa11.74□□□□□ -0.53
USP8-208ENST00000559329 CD28P10747 220 aa11.74□□□□□ -0.53
USP8-208ENST00000559329 C2orf91Q6ZV80 131 aa11.74□□□□□ -0.53
USP8-208ENST00000559329 NF1P21359 2839 aa11.73□□□□□ -0.53
USP8-208ENST00000559329 TRGV11A0A075B6L2 103 aa11.73□□□□□ -0.53
USP8-208ENST00000559329 A0A087WWL8 130 aa11.73□□□□□ -0.53
USP8-208ENST00000559329 PRSS1P07477 247 aa11.73□□□□□ -0.53
USP8-208ENST00000559329 ZNF124Q15973 351 aa11.73□□□□□ -0.53
USP8-208ENST00000559329 CD300EQ496F6 205 aaPredicted RBP11.73□□□□□ -0.53
USP8-208ENST00000559329 SYT8Q8NBV8 401 aa11.73□□□□□ -0.53
USP8-208ENST00000559329 TOMM6Q96B49 74 aa11.73□□□□□ -0.53
USP8-208ENST00000559329 HHLA3Q9XRX5 114 aa11.73□□□□□ -0.53
USP8-208ENST00000559329 ZNF256Q9Y2P7 627 aaPredicted RBP11.73□□□□□ -0.53
USP8-208ENST00000559329 ACANP16112 2415 aa11.73□□□□□ -0.53
USP8-208ENST00000559329 LINC01006Q8NI28 216 aa11.72□□□□□ -0.53
USP8-208ENST00000559329 SPAG8Q99932 426 aaPredicted RBP11.72□□□□□ -0.53
USP8-208ENST00000559329 CSTL1Q9H114 145 aa11.72□□□□□ -0.53
USP8-208ENST00000559329 CRYGDP07320 174 aa11.72□□□□□ -0.53
USP8-208ENST00000559329 POLR2KP53803 58 aaKnown RBP11.72□□□□□ -0.53
USP8-208ENST00000559329 BOD1L2Q8IYS8 172 aa11.72□□□□□ -0.53
USP8-208ENST00000559329 CCL24O00175 119 aa11.71□□□□□ -0.53
USP8-208ENST00000559329 TMEM160Q9NX00 188 aa11.71□□□□□ -0.53
USP8-208ENST00000559329 TRAV25A0A0B4J276 109 aa11.7□□□□□ -0.54
USP8-208ENST00000559329 TRBV6-5A0A0K0K1A5 114 aa11.7□□□□□ -0.54
USP8-208ENST00000559329 IGKCP01834 107 aa11.7□□□□□ -0.54
USP8-208ENST00000559329 MPV17L2Q567V2 206 aa11.7□□□□□ -0.54
USP8-208ENST00000559329 C11orf44Q8N8P7 122 aa11.7□□□□□ -0.54
USP8-208ENST00000559329 CITED2Q99967 270 aaPredicted RBP11.7□□□□□ -0.54
USP8-208ENST00000559329 A0A087WX48 190 aa11.7□□□□□ -0.54
USP8-208ENST00000559329 TRAV12-1A0A0B4J245 112 aa11.7□□□□□ -0.54
USP8-208ENST00000559329 DLEU1O43261 78 aa11.7□□□□□ -0.54
USP8-208ENST00000559329 SCGB2A2Q13296 93 aa11.7□□□□□ -0.54
USP8-208ENST00000559329 A0A1W2PRX2 142 aa11.69□□□□□ -0.54
USP8-208ENST00000559329 CBY3A6NI87 242 aa11.69□□□□□ -0.54
USP8-208ENST00000559329 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.69□□□□□ -0.54
USP8-208ENST00000559329 DPM2O94777 84 aa11.69□□□□□ -0.54
USP8-208ENST00000559329 BVES-AS1Q5T3Y7 98 aa11.69□□□□□ -0.54
USP8-208ENST00000559329 CLUHP3Q96NS8 147 aa11.69□□□□□ -0.54
USP8-208ENST00000559329 MRPL35Q9NZE8 188 aaKnown RBP11.69□□□□□ -0.54
USP8-208ENST00000559329 TSSC4Q9Y5U2 329 aaPredicted RBP11.69□□□□□ -0.54
USP8-208ENST00000559329 M0QY20 66 aa11.68□□□□□ -0.54
USP8-208ENST00000559329 HILS1P60008 231 aa11.68□□□□□ -0.54
USP8-208ENST00000559329 MORN3Q6PF18 240 aaPredicted RBP11.68□□□□□ -0.54
USP8-208ENST00000559329 C2orf66Q6UXQ4 117 aa11.68□□□□□ -0.54
USP8-208ENST00000559329 ODF3L2Q3SX64 289 aa11.68□□□□□ -0.54
USP8-208ENST00000559329 ZNF876PQ49A33 203 aa11.68□□□□□ -0.54
USP8-208ENST00000559329 FAM74A4Q5TZK3 123 aa11.68□□□□□ -0.54
USP8-208ENST00000559329 C12orf54Q6X4T0 127 aa11.68□□□□□ -0.54
USP8-208ENST00000559329 NEGR1Q7Z3B1 354 aa11.68□□□□□ -0.54
USP8-208ENST00000559329 SCGB3A1Q96QR1 104 aa11.68□□□□□ -0.54
USP8-208ENST00000559329 LINC00467Q9BRT7 94 aa11.68□□□□□ -0.54
USP8-208ENST00000559329 TRBV27A0A0K0K1C4 114 aa11.67□□□□□ -0.54
USP8-208ENST00000559329 F5H697 171 aa11.67□□□□□ -0.54
USP8-208ENST00000559329 ZNF25P17030 456 aaPredicted RBP11.67□□□□□ -0.54
USP8-208ENST00000559329 NEXN-AS1Q8NBZ9 246 aa11.67□□□□□ -0.54
USP8-208ENST00000559329 TMEM208Q9BTX3 173 aa11.67□□□□□ -0.54
USP8-208ENST00000559329 GCN1Q92616 2671 aaKnown RBP11.67□□□□□ -0.54
USP8-208ENST00000559329 VCYO14598 125 aa11.66□□□□□ -0.54
USP8-208ENST00000559329 PCP2Q8IVA1 136 aa11.66□□□□□ -0.54
USP8-208ENST00000559329 MTORP42345 2549 aa11.66□□□□□ -0.54
USP8-208ENST00000559329 FASNP49327 2511 aaKnown RBP11.66□□□□□ -0.54
USP8-208ENST00000559329 IGKV2D-26A0A0A0MRZ7 120 aa11.66□□□□□ -0.54
USP8-208ENST00000559329 SDHAF1A6NFY7 115 aa11.66□□□□□ -0.54
USP8-208ENST00000559329 SIVA1O15304 175 aa11.66□□□□□ -0.54
USP8-208ENST00000559329 TCTAP57738 103 aa11.66□□□□□ -0.54
USP8-208ENST00000559329 ZFP2Q6ZN57 461 aa11.66□□□□□ -0.54
USP8-208ENST00000559329 ZNF418Q8TF45 676 aaPredicted RBP11.66□□□□□ -0.54
USP8-208ENST00000559329 JMJD8Q96S16 334 aa11.66□□□□□ -0.54
USP8-208ENST00000559329 F8VRH5 84 aa11.65□□□□□ -0.54
USP8-208ENST00000559329 NDUFA7O95182 113 aa11.65□□□□□ -0.54
USP8-208ENST00000559329 PLNP26678 52 aa11.65□□□□□ -0.54
USP8-208ENST00000559329 ZNF56Q15929 161 aa11.65□□□□□ -0.54
USP8-208ENST00000559329 PIK3CD-AS1Q5SR53 167 aa11.65□□□□□ -0.54
USP8-208ENST00000559329 ZC2HC1BQ5TFG8 222 aa11.65□□□□□ -0.54
USP8-208ENST00000559329 ERASQ7Z444 233 aa11.65□□□□□ -0.54
USP8-208ENST00000559329 PTH2Q96A98 100 aa11.65□□□□□ -0.54
USP8-208ENST00000559329 EDA2RQ9HAV5 297 aa11.65□□□□□ -0.54
USP8-208ENST00000559329 H7C1H1 209 aa11.64□□□□□ -0.55
USP8-208ENST00000559329 G0S2P27469 103 aa11.64□□□□□ -0.55
USP8-208ENST00000559329 NMUP48645 174 aa11.64□□□□□ -0.55
USP8-208ENST00000559329 RIPPLY3P57055 190 aa11.64□□□□□ -0.55
USP8-208ENST00000559329 GAGE1Q13065 139 aa11.64□□□□□ -0.55
USP8-208ENST00000559329 BAALCQ8WXS3 180 aa11.64□□□□□ -0.55
USP8-208ENST00000559329 LINC01549A6NIU2 74 aa11.64□□□□□ -0.55
USP8-208ENST00000559329 TRPT1Q86TN4 253 aaKnown RBP11.64□□□□□ -0.55
USP8-208ENST00000559329 KIR2DL4Q99706 377 aa11.64□□□□□ -0.55
USP8-208ENST00000559329 CYSLTR1Q9Y271 337 aa11.64□□□□□ -0.55
USP8-208ENST00000559329 ADARB2-AS1A8MUL3 147 aa11.63□□□□□ -0.55
USP8-208ENST00000559329 UFSP1Q6NVU6 142 aa11.63□□□□□ -0.55
USP8-208ENST00000559329 C11orf72Q8NBR9 251 aa11.63□□□□□ -0.55
USP8-208ENST00000559329 SMR3AQ99954 134 aa11.63□□□□□ -0.55
USP8-208ENST00000559329 IGIPA6NJ69 53 aa11.62□□□□□ -0.55
USP8-208ENST00000559329 INSP01308 110 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms