RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 DNHD1Q96M86 4753 aa9.46□□□□□ -0.9
SMAD3-207ENST00000558763 PRSS47A8MTI9 375 aa9.46□□□□□ -0.9
SMAD3-207ENST00000558763 FA2HQ7L5A8 372 aa9.46□□□□□ -0.9
SMAD3-207ENST00000558763 OR2K2Q8NGT1 345 aa9.46□□□□□ -0.9
SMAD3-207ENST00000558763 AP1S3Q96PC3 154 aa9.46□□□□□ -0.9
SMAD3-207ENST00000558763 NACAE9PAV3 2078 aa9.45□□□□□ -0.9
SMAD3-207ENST00000558763 OR11H12B2RN74 326 aa9.45□□□□□ -0.9
SMAD3-207ENST00000558763 INSL3P51460 131 aa9.45□□□□□ -0.9
SMAD3-207ENST00000558763 OXLD1Q5BKU9 147 aa9.45□□□□□ -0.9
SMAD3-207ENST00000558763 MRAP2Q96G30 205 aa9.45□□□□□ -0.9
SMAD3-207ENST00000558763 MAP1LC3AQ9H492 121 aa9.45□□□□□ -0.9
SMAD3-207ENST00000558763 LEPROTL1O95214 131 aa9.44□□□□□ -0.9
SMAD3-207ENST00000558763 PRM2P04554 102 aa9.44□□□□□ -0.9
SMAD3-207ENST00000558763 RASL10AQ92737 203 aa9.44□□□□□ -0.9
SMAD3-207ENST00000558763 FAM110AQ9BQ89 295 aa9.44□□□□□ -0.9
SMAD3-207ENST00000558763 LINC00587B1AMM8 73 aa9.44□□□□□ -0.9
SMAD3-207ENST00000558763 WFDC10AQ9H1F0 79 aa9.44□□□□□ -0.9
SMAD3-207ENST00000558763 BTF3P20290 206 aaKnown RBP9.43□□□□□ -0.9
SMAD3-207ENST00000558763 LINC00467Q9BRT7 94 aa9.43□□□□□ -0.9
SMAD3-207ENST00000558763 PRO1933Q9H354 126 aa9.43□□□□□ -0.9
SMAD3-207ENST00000558763 TRGV11A0A075B6L2 103 aa9.43□□□□□ -0.9
SMAD3-207ENST00000558763 KIR2DL5BA0A0G2JN68 375 aa9.43□□□□□ -0.9
SMAD3-207ENST00000558763 KIR2DL5BA0A0G2JPC4 375 aa9.43□□□□□ -0.9
SMAD3-207ENST00000558763 GIG44P09565 113 aaPredicted RBP9.43□□□□□ -0.9
SMAD3-207ENST00000558763 KIR2DL5AQ8N109 375 aa9.43□□□□□ -0.9
SMAD3-207ENST00000558763 RPL39LQ96EH5 51 aaKnown RBP9.43□□□□□ -0.9
SMAD3-207ENST00000558763 CBY3A6NI87 242 aa9.42□□□□□ -0.9
SMAD3-207ENST00000558763 SYS1-DBNDD2H3BUS1 97 aa9.42□□□□□ -0.9
SMAD3-207ENST00000558763 PKIAP61925 76 aa9.42□□□□□ -0.9
SMAD3-207ENST00000558763 STHQ8IWL8 128 aa9.42□□□□□ -0.9
SMAD3-207ENST00000558763 Q8N8P6 123 aa9.42□□□□□ -0.9
SMAD3-207ENST00000558763 C11orf72Q8NBR9 251 aa9.42□□□□□ -0.9
SMAD3-207ENST00000558763 C20orf144Q9BQM9 153 aa9.42□□□□□ -0.9
SMAD3-207ENST00000558763 TMEM70Q9BUB7 260 aa9.42□□□□□ -0.9
SMAD3-207ENST00000558763 NXT2Q9NPJ8 142 aaKnown RBP9.42□□□□□ -0.9
SMAD3-207ENST00000558763 MGAM2Q2M2H8 2515 aa9.42□□□□□ -0.9
SMAD3-207ENST00000558763 INSP01308 110 aa9.41□□□□□ -0.9
SMAD3-207ENST00000558763 CRYGDP07320 174 aa9.41□□□□□ -0.9
SMAD3-207ENST00000558763 C1orf158Q8N1D5 194 aa9.41□□□□□ -0.9
SMAD3-207ENST00000558763 A0A087WWL8 130 aa9.41□□□□□ -0.9
SMAD3-207ENST00000558763 G3V4G9 280 aa9.41□□□□□ -0.9
SMAD3-207ENST00000558763 HBDP02042 147 aa9.41□□□□□ -0.9
SMAD3-207ENST00000558763 MGPP08493 103 aa9.41□□□□□ -0.9
SMAD3-207ENST00000558763 XCL2Q9UBD3 114 aa9.41□□□□□ -0.9
SMAD3-207ENST00000558763 NBEAL1Q6ZS30 2694 aa9.4□□□□□ -0.9
SMAD3-207ENST00000558763 NOTCH1P46531 2555 aa9.4□□□□□ -0.9
SMAD3-207ENST00000558763 WIPF1O43516 503 aa9.4□□□□□ -0.9
SMAD3-207ENST00000558763 CMC4P56277 68 aaPredicted RBP9.4□□□□□ -0.9
SMAD3-207ENST00000558763 SUMO4Q6EEV6 95 aa9.4□□□□□ -0.9
SMAD3-207ENST00000558763 SMIM2Q9BVW6 85 aa9.4□□□□□ -0.9
SMAD3-207ENST00000558763 SUMO2P61956 95 aaKnown RBP9.39□□□□□ -0.91
SMAD3-207ENST00000558763 ZNF876PQ49A33 203 aa9.39□□□□□ -0.91
SMAD3-207ENST00000558763 HSPB8Q9UJY1 196 aa9.39□□□□□ -0.91
SMAD3-207ENST00000558763 HTN1P15515 57 aa9.39□□□□□ -0.91
SMAD3-207ENST00000558763 SYT8Q8NBV8 401 aa9.39□□□□□ -0.91
SMAD3-207ENST00000558763 C20orf78Q9BR46 151 aa9.39□□□□□ -0.91
SMAD3-207ENST00000558763 TSTD3H0UI37 97 aa9.38□□□□□ -0.91
SMAD3-207ENST00000558763 MORN3Q6PF18 240 aaPredicted RBP9.38□□□□□ -0.91
SMAD3-207ENST00000558763 ATOH7Q8N100 152 aa9.38□□□□□ -0.91
SMAD3-207ENST00000558763 IL17DQ8TAD2 202 aa9.38□□□□□ -0.91
SMAD3-207ENST00000558763 AZU1P20160 251 aa9.37□□□□□ -0.91
SMAD3-207ENST00000558763 FCER1GP30273 86 aa9.37□□□□□ -0.91
SMAD3-207ENST00000558763 MAJINQ3KP22 176 aa9.37□□□□□ -0.91
SMAD3-207ENST00000558763 LINC01545Q5VT33 79 aa9.37□□□□□ -0.91
SMAD3-207ENST00000558763 UFSP1Q6NVU6 142 aa9.37□□□□□ -0.91
SMAD3-207ENST00000558763 PET117Q6UWS5 81 aa9.37□□□□□ -0.91
SMAD3-207ENST00000558763 GTSCR1Q86UQ5 136 aa9.37□□□□□ -0.91
SMAD3-207ENST00000558763 PTH2Q96A98 100 aa9.37□□□□□ -0.91
SMAD3-207ENST00000558763 LINC01587Q99440 93 aa9.37□□□□□ -0.91
SMAD3-207ENST00000558763 VAMP8Q9BV40 100 aa9.37□□□□□ -0.91
SMAD3-207ENST00000558763 PAM16Q9Y3D7 125 aa9.37□□□□□ -0.91
SMAD3-207ENST00000558763 TCAPO15273 167 aa9.37□□□□□ -0.91
SMAD3-207ENST00000558763 SMIM17P0DL12 118 aa9.37□□□□□ -0.91
SMAD3-207ENST00000558763 DDTP30046 118 aa9.37□□□□□ -0.91
SMAD3-207ENST00000558763 KRTAP10-11P60412 298 aa9.37□□□□□ -0.91
SMAD3-207ENST00000558763 ZNF415Q09FC8 603 aa9.37□□□□□ -0.91
SMAD3-207ENST00000558763 PIK3CD-AS1Q5SR53 167 aa9.37□□□□□ -0.91
SMAD3-207ENST00000558763 MAP1LC3CQ9BXW4 147 aa9.37□□□□□ -0.91
SMAD3-207ENST00000558763 M0QY20 66 aa9.36□□□□□ -0.91
SMAD3-207ENST00000558763 RPL32P62910 135 aaKnown RBP9.36□□□□□ -0.91
SMAD3-207ENST00000558763 SAMD5Q5TGI4 173 aa9.36□□□□□ -0.91
SMAD3-207ENST00000558763 FAM74A4Q5TZK3 123 aa9.36□□□□□ -0.91
SMAD3-207ENST00000558763 CSNK1G2-AS1Q8NCQ2 148 aa9.36□□□□□ -0.91
SMAD3-207ENST00000558763 M0R2P5 195 aa9.35□□□□□ -0.91
SMAD3-207ENST00000558763 POLR2KP53803 58 aaKnown RBP9.35□□□□□ -0.91
SMAD3-207ENST00000558763 LAGE3Q14657 143 aa9.35□□□□□ -0.91
SMAD3-207ENST00000558763 RNASE8Q8TDE3 154 aaKnown RBP9.35□□□□□ -0.91
SMAD3-207ENST00000558763 DNAH3Q8TD57 4116 aa9.35□□□□□ -0.91
SMAD3-207ENST00000558763 TRBV6-5A0A0K0K1A5 114 aa9.35□□□□□ -0.91
SMAD3-207ENST00000558763 NUTF2P61970 127 aaKnown RBP9.35□□□□□ -0.91
SMAD3-207ENST00000558763 EGFEM1PQ0D2K5 195 aa9.35□□□□□ -0.91
SMAD3-207ENST00000558763 PPP1R17O96001 155 aa9.34□□□□□ -0.91
SMAD3-207ENST00000558763 IFI27L1Q96BM0 104 aa9.34□□□□□ -0.91
SMAD3-207ENST00000558763 EDA2RQ9HAV5 297 aa9.34□□□□□ -0.91
SMAD3-207ENST00000558763 RPL35AP18077 110 aaKnown RBP9.33□□□□□ -0.92
SMAD3-207ENST00000558763 NEGR1Q7Z3B1 354 aa9.33□□□□□ -0.92
SMAD3-207ENST00000558763 PMCHL2Q9BQD1 86 aa9.33□□□□□ -0.92
SMAD3-207ENST00000558763 CSTL1Q9H114 145 aa9.33□□□□□ -0.92
SMAD3-207ENST00000558763 TRAV9-2A0A087WT02 112 aa9.33□□□□□ -0.92
SMAD3-207ENST00000558763 ZNF56Q15929 161 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms