RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 FAM74A1Q5RGS3 127 aa2.89□□□□□ -1.95
SPG11-211ENST00000558561 Q6AWC8 147 aa2.89□□□□□ -1.95
SPG11-211ENST00000558561 ZNF493Q6ZR52 646 aa2.89□□□□□ -1.95
SPG11-211ENST00000558561 Q6ZR54 194 aa2.89□□□□□ -1.95
SPG11-211ENST00000558561 S100A7AQ86SG5 101 aa2.89□□□□□ -1.95
SPG11-211ENST00000558561 LYPD1Q8N2G4 141 aa2.89□□□□□ -1.95
SPG11-211ENST00000558561 TMEM256Q8N2U0 113 aa2.89□□□□□ -1.95
SPG11-211ENST00000558561 NHLRC2Q8NBF2 726 aa2.89□□□□□ -1.95
SPG11-211ENST00000558561 ZNRF2Q8NHG8 242 aa2.89□□□□□ -1.95
SPG11-211ENST00000558561 FAM213BQ8TBF2 198 aa2.89□□□□□ -1.95
SPG11-211ENST00000558561 PCNPQ8WW12 178 aaKnown RBP2.89□□□□□ -1.95
SPG11-211ENST00000558561 MBD3L1Q8WWY6 194 aa2.89□□□□□ -1.95
SPG11-211ENST00000558561 C16orf74Q96GX8 76 aa2.89□□□□□ -1.95
SPG11-211ENST00000558561 ODF3Q96PU9 254 aa2.89□□□□□ -1.95
SPG11-211ENST00000558561 PYGO2Q9BRQ0 406 aa2.89□□□□□ -1.95
SPG11-211ENST00000558561 ZNF471Q9BX82 626 aaPredicted RBP2.89□□□□□ -1.95
SPG11-211ENST00000558561 SAMD10Q9BYL1 202 aa2.89□□□□□ -1.95
SPG11-211ENST00000558561 IGLV7-46A0A075B6I9 117 aa2.88□□□□□ -1.95
SPG11-211ENST00000558561 TMSB15BA0A087X1C1 80 aa2.88□□□□□ -1.95
SPG11-211ENST00000558561 A0A1B0GVY2 172 aa2.88□□□□□ -1.95
SPG11-211ENST00000558561 RAB19A4D1S5 217 aa2.88□□□□□ -1.95
SPG11-211ENST00000558561 RBAKDNA6NC62 111 aa2.88□□□□□ -1.95
SPG11-211ENST00000558561 MAP1LC3B2A6NCE7 125 aa2.88□□□□□ -1.95
SPG11-211ENST00000558561 SSTP61278 116 aa2.88□□□□□ -1.95
SPG11-211ENST00000558561 RPL19P84098 196 aaKnown RBP2.88□□□□□ -1.95
SPG11-211ENST00000558561 FLI1Q01543 452 aaPredicted RBP2.88□□□□□ -1.95
SPG11-211ENST00000558561 AKR1C8PQ5T2L2 129 aa2.88□□□□□ -1.95
SPG11-211ENST00000558561 KRTAP5-11Q6L8G4 156 aa2.88□□□□□ -1.95
SPG11-211ENST00000558561 OCC1Q8TAD7 63 aa2.88□□□□□ -1.95
SPG11-211ENST00000558561 CMTM2Q8TAZ6 248 aa2.88□□□□□ -1.95
SPG11-211ENST00000558561 RXFP4Q8TDU9 374 aa2.88□□□□□ -1.95
SPG11-211ENST00000558561 SFT2D1Q8WV19 159 aa2.88□□□□□ -1.95
SPG11-211ENST00000558561 ZC2HC1AQ96GY0 325 aa2.88□□□□□ -1.95
SPG11-211ENST00000558561 C20orf144Q9BQM9 153 aa2.88□□□□□ -1.95
SPG11-211ENST00000558561 LINC00467Q9BRT7 94 aa2.88□□□□□ -1.95
SPG11-211ENST00000558561 DERL1Q9BUN8 251 aa2.88□□□□□ -1.95
SPG11-211ENST00000558561 MAP1LC3BQ9GZQ8 125 aa2.88□□□□□ -1.95
SPG11-211ENST00000558561 RNF24Q9Y225 148 aa2.88□□□□□ -1.95
SPG11-211ENST00000558561 ARL2-SNX15V9GYD0 113 aa2.88□□□□□ -1.95
SPG11-211ENST00000558561 TRGV2A0A075B6R0 118 aa2.87□□□□□ -1.95
SPG11-211ENST00000558561 A0A0D9SG52 128 aa2.87□□□□□ -1.95
SPG11-211ENST00000558561 A0A1W2PRE2 83 aa2.87□□□□□ -1.95
SPG11-211ENST00000558561 NDUFAF8A1L188 74 aa2.87□□□□□ -1.95
SPG11-211ENST00000558561 KRTAP16-1A8MUX0 517 aa2.87□□□□□ -1.95
SPG11-211ENST00000558561 H7C423 109 aa2.87□□□□□ -1.95
SPG11-211ENST00000558561 M0R036 132 aa2.87□□□□□ -1.95
SPG11-211ENST00000558561 PEX7O00628 323 aa2.87□□□□□ -1.95
SPG11-211ENST00000558561 TAAR5O14804 337 aa2.87□□□□□ -1.95
SPG11-211ENST00000558561 BCL2L11O43521 198 aa2.87□□□□□ -1.95
SPG11-211ENST00000558561 IFNA7P01567 189 aa2.87□□□□□ -1.95
SPG11-211ENST00000558561 IGLV2-8P01709 118 aa2.87□□□□□ -1.95
SPG11-211ENST00000558561 MBP02144 154 aa2.87□□□□□ -1.95
SPG11-211ENST00000558561 NMBP08949 121 aa2.87□□□□□ -1.95
SPG11-211ENST00000558561 SEC11BP0C7V7 166 aa2.87□□□□□ -1.95
SPG11-211ENST00000558561 P0DMU3 169 aa2.87□□□□□ -1.95
SPG11-211ENST00000558561 FAM231AP0DMU4 169 aa2.87□□□□□ -1.95
SPG11-211ENST00000558561 FAM231CP0DMU5 169 aa2.87□□□□□ -1.95
SPG11-211ENST00000558561 GZMBP10144 247 aa2.87□□□□□ -1.95
SPG11-211ENST00000558561 CRYBA4P53673 196 aa2.87□□□□□ -1.95
SPG11-211ENST00000558561 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
SPG11-211ENST00000558561 LYPD5Q6UWN5 251 aa2.87□□□□□ -1.95
SPG11-211ENST00000558561 FAM159AQ6UWV7 190 aa2.87□□□□□ -1.95
SPG11-211ENST00000558561 UBE2DNLQ8IWF7 75 aa2.87□□□□□ -1.95
SPG11-211ENST00000558561 C9orf62Q8N4C0 152 aa2.87□□□□□ -1.95
SPG11-211ENST00000558561 C5orf17Q8NAS9 161 aa2.87□□□□□ -1.95
SPG11-211ENST00000558561 ZNF680Q8NEM1 530 aa2.87□□□□□ -1.95
SPG11-211ENST00000558561 STOML3Q8TAV4 291 aa2.87□□□□□ -1.95
SPG11-211ENST00000558561 RASL10AQ92737 203 aa2.87□□□□□ -1.95
SPG11-211ENST00000558561 DNAJC30Q96LL9 226 aa2.87□□□□□ -1.95
SPG11-211ENST00000558561 C2orf48Q96LS8 159 aa2.87□□□□□ -1.95
SPG11-211ENST00000558561 C9orf85Q96MD7 179 aa2.87□□□□□ -1.95
SPG11-211ENST00000558561 FAM218AQ96MZ4 157 aa2.87□□□□□ -1.95
SPG11-211ENST00000558561 TMEM167BQ9NRX6 74 aa2.87□□□□□ -1.95
SPG11-211ENST00000558561 KCNIP2Q9NS61 270 aa2.87□□□□□ -1.95
SPG11-211ENST00000558561 HHLA3Q9XRX5 114 aa2.87□□□□□ -1.95
SPG11-211ENST00000558561 DNAH5Q8TE73 4624 aa2.87□□□□□ -1.95
SPG11-211ENST00000558561 TRAV21A0A0B4J279 112 aa2.86□□□□□ -1.95
SPG11-211ENST00000558561 TRBV7-9A0A0J9YWB2 115 aa2.86□□□□□ -1.95
SPG11-211ENST00000558561 NBDYA0A0U1RRE5 68 aa2.86□□□□□ -1.95
SPG11-211ENST00000558561 KANTRA0A1W2PQU2 76 aa2.86□□□□□ -1.95
SPG11-211ENST00000558561 KRBOX1C9JBD0 128 aa2.86□□□□□ -1.95
SPG11-211ENST00000558561 TEX46H3BTG2 121 aa2.86□□□□□ -1.95
SPG11-211ENST00000558561 RS1O15537 224 aa2.86□□□□□ -1.95
SPG11-211ENST00000558561 SH2D1AO60880 128 aa2.86□□□□□ -1.95
SPG11-211ENST00000558561 ORM1P02763 201 aa2.86□□□□□ -1.95
SPG11-211ENST00000558561 ARMS2P0C7Q2 107 aa2.86□□□□□ -1.95
SPG11-211ENST00000558561 TCTAP57738 103 aa2.86□□□□□ -1.95
SPG11-211ENST00000558561 LGALS9BQ3B8N2 356 aa2.86□□□□□ -1.95
SPG11-211ENST00000558561 TDRG1Q3Y452 100 aa2.86□□□□□ -1.95
SPG11-211ENST00000558561 RNF212Q495C1 297 aa2.86□□□□□ -1.95
SPG11-211ENST00000558561 SMUG1Q53HV7 270 aa2.86□□□□□ -1.95
SPG11-211ENST00000558561 ZNF506Q5JVG8 444 aa2.86□□□□□ -1.95
SPG11-211ENST00000558561 IBA57Q5T440 356 aaKnown RBP2.86□□□□□ -1.95
SPG11-211ENST00000558561 CFAP126Q5VTH2 177 aa2.86□□□□□ -1.95
SPG11-211ENST00000558561 TCTE3Q8IZS6 198 aa2.86□□□□□ -1.95
SPG11-211ENST00000558561 C14orf178Q8N769 122 aaPredicted RBP2.86□□□□□ -1.95
SPG11-211ENST00000558561 CYB561D1Q8N8Q1 229 aa2.86□□□□□ -1.95
SPG11-211ENST00000558561 DEFB104AQ8WTQ1 72 aa2.86□□□□□ -1.95
SPG11-211ENST00000558561 ASB13Q8WXK3 278 aa2.86□□□□□ -1.95
SPG11-211ENST00000558561 TRGV4A0A0C4DH28 118 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms