RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 NDUFA11Q86Y39 141 aa6.14□□□□□ -1.43
RTF1-205ENST00000558298 GLMPQ8WWB7 406 aa6.14□□□□□ -1.43
RTF1-205ENST00000558298 RNF183Q96D59 192 aa6.14□□□□□ -1.43
RTF1-205ENST00000558298 RASL11BQ9BPW5 248 aa6.14□□□□□ -1.43
RTF1-205ENST00000558298 TNFRSF18Q9Y5U5 241 aa6.14□□□□□ -1.43
RTF1-205ENST00000558298 TRBV7-3A0A075B6L6 115 aa6.13□□□□□ -1.43
RTF1-205ENST00000558298 TRBV19A0A075B6N1 114 aa6.13□□□□□ -1.43
RTF1-205ENST00000558298 IGKV1D-37A0A075B6S9 117 aa6.13□□□□□ -1.43
RTF1-205ENST00000558298 IGHV7-81A0A0B4J1V7 117 aa6.13□□□□□ -1.43
RTF1-205ENST00000558298 WI2-2373I1.2A0A1W2PRP0 233 aa6.13□□□□□ -1.43
RTF1-205ENST00000558298 F8VRH5 84 aa6.13□□□□□ -1.43
RTF1-205ENST00000558298 IGLV2-11P01706 119 aa6.13□□□□□ -1.43
RTF1-205ENST00000558298 HLA-DMBP28068 263 aa6.13□□□□□ -1.43
RTF1-205ENST00000558298 PPIFP30405 207 aaKnown RBP6.13□□□□□ -1.43
RTF1-205ENST00000558298 LEPP41159 167 aa6.13□□□□□ -1.43
RTF1-205ENST00000558298 NDUFV3P56181 108 aaKnown RBP6.13□□□□□ -1.43
RTF1-205ENST00000558298 RPL32P62910 135 aaKnown RBP6.13□□□□□ -1.43
RTF1-205ENST00000558298 LAGE3Q14657 143 aa6.13□□□□□ -1.43
RTF1-205ENST00000558298 SH2D6Q7Z4S9 175 aa6.13□□□□□ -1.43
RTF1-205ENST00000558298 NAA38Q9BRA0 125 aaKnown RBP6.13□□□□□ -1.43
RTF1-205ENST00000558298 IMUPQ9GZP8 106 aa6.13□□□□□ -1.43
RTF1-205ENST00000558298 FBXL15Q9H469 300 aa6.13□□□□□ -1.43
RTF1-205ENST00000558298 SIGLEC9Q9Y336 463 aa6.13□□□□□ -1.43
RTF1-205ENST00000558298 ADARB2-AS1A8MUL3 147 aa6.12□□□□□ -1.43
RTF1-205ENST00000558298 H3BUA1 57 aa6.12□□□□□ -1.43
RTF1-205ENST00000558298 J3KRW8 73 aa6.12□□□□□ -1.43
RTF1-205ENST00000558298 ELANEP08246 267 aa6.12□□□□□ -1.43
RTF1-205ENST00000558298 PSMB8P28062 276 aa6.12□□□□□ -1.43
RTF1-205ENST00000558298 UBE2D1P51668 147 aa6.12□□□□□ -1.43
RTF1-205ENST00000558298 XGP55808 180 aa6.12□□□□□ -1.43
RTF1-205ENST00000558298 FOXE3Q13461 319 aa6.12□□□□□ -1.43
RTF1-205ENST00000558298 KLK9Q2XQG4 91 aa6.12□□□□□ -1.43
RTF1-205ENST00000558298 LYZL1Q6UWQ5 148 aa6.12□□□□□ -1.43
RTF1-205ENST00000558298 LINC00322Q6ZN03 302 aaPredicted RBP6.12□□□□□ -1.43
RTF1-205ENST00000558298 ZC2HC1AQ96GY0 325 aa6.12□□□□□ -1.43
RTF1-205ENST00000558298 C20orf78Q9BR46 151 aa6.12□□□□□ -1.43
RTF1-205ENST00000558298 KLK9Q9UKQ9 250 aa6.12□□□□□ -1.43
RTF1-205ENST00000558298 NOTCH1P46531 2555 aa6.11□□□□□ -1.43
RTF1-205ENST00000558298 LOC389332A0A1B0GUA5 103 aa6.11□□□□□ -1.43
RTF1-205ENST00000558298 TMEM213A2RRL7 107 aa6.11□□□□□ -1.43
RTF1-205ENST00000558298 K7ERJ3 54 aa6.11□□□□□ -1.43
RTF1-205ENST00000558298 IGLV1-40P01703 118 aa6.11□□□□□ -1.43
RTF1-205ENST00000558298 MT-ATP8P03928 68 aa6.11□□□□□ -1.43
RTF1-205ENST00000558298 ACYP1P07311 99 aa6.11□□□□□ -1.43
RTF1-205ENST00000558298 LGALS1P09382 135 aaKnown RBP6.11□□□□□ -1.43
RTF1-205ENST00000558298 CNTFRP26992 372 aa6.11□□□□□ -1.43
RTF1-205ENST00000558298 RPL13AP40429 203 aaKnown RBP6.11□□□□□ -1.43
RTF1-205ENST00000558298 NDPQ00604 133 aa6.11□□□□□ -1.43
RTF1-205ENST00000558298 MRGPRG-AS1Q2M3A8 158 aa6.11□□□□□ -1.43
RTF1-205ENST00000558298 MORN5Q5VZ52 161 aa6.11□□□□□ -1.43
RTF1-205ENST00000558298 MORN3Q6PF18 240 aaPredicted RBP6.11□□□□□ -1.43
RTF1-205ENST00000558298 ASCL2Q99929 193 aa6.11□□□□□ -1.43
RTF1-205ENST00000558298 SHANK2-AS3Q9BTD1 123 aa6.11□□□□□ -1.43
RTF1-205ENST00000558298 DKK2Q9UBU2 259 aa6.11□□□□□ -1.43
RTF1-205ENST00000558298 UFC1Q9Y3C8 167 aa6.11□□□□□ -1.43
RTF1-205ENST00000558298 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.1□□□□□ -1.43
RTF1-205ENST00000558298 B5MCH6 92 aa6.1□□□□□ -1.43
RTF1-205ENST00000558298 ATP6V0E1O15342 81 aa6.1□□□□□ -1.43
RTF1-205ENST00000558298 TNFRSF6BO95407 300 aa6.1□□□□□ -1.43
RTF1-205ENST00000558298 IGLC6P0CF74 106 aa6.1□□□□□ -1.43
RTF1-205ENST00000558298 P0DMU3 169 aa6.1□□□□□ -1.43
RTF1-205ENST00000558298 FAM231AP0DMU4 169 aa6.1□□□□□ -1.43
RTF1-205ENST00000558298 FAM231CP0DMU5 169 aa6.1□□□□□ -1.43
RTF1-205ENST00000558298 RPL7P18124 248 aaKnown RBP6.1□□□□□ -1.43
RTF1-205ENST00000558298 LINC00205P59089 165 aa6.1□□□□□ -1.43
RTF1-205ENST00000558298 SS18L2Q9UHA2 77 aa6.1□□□□□ -1.43
RTF1-205ENST00000558298 PRKDCP78527 4128 aaKnown RBP6.1□□□□□ -1.43
RTF1-205ENST00000558298 NOTCH3Q9UM47 2321 aa6.09□□□□□ -1.43
RTF1-205ENST00000558298 TRAV41A0A0B4J266 112 aa6.09□□□□□ -1.43
RTF1-205ENST00000558298 RBAKDNA6NC62 111 aa6.09□□□□□ -1.43
RTF1-205ENST00000558298 PRSS29PA6NIE9 313 aa6.09□□□□□ -1.43
RTF1-205ENST00000558298 H3BRN7 92 aa6.09□□□□□ -1.43
RTF1-205ENST00000558298 CD28P10747 220 aa6.09□□□□□ -1.43
RTF1-205ENST00000558298 EGR2P11161 476 aaPredicted RBP6.09□□□□□ -1.43
RTF1-205ENST00000558298 RPL27AP46776 148 aaKnown RBP6.09□□□□□ -1.43
RTF1-205ENST00000558298 PSMB2P49721 201 aa6.09□□□□□ -1.43
RTF1-205ENST00000558298 WT1-ASQ06250 92 aa6.09□□□□□ -1.43
RTF1-205ENST00000558298 SRSF9Q13242 221 aaKnown RBP eCLIP6.09□□□□□ -1.43
RTF1-205ENST00000558298 ATXN8Q156A1 80 aa6.09□□□□□ -1.43
RTF1-205ENST00000558298 TM4SF20Q53R12 229 aa6.09□□□□□ -1.43
RTF1-205ENST00000558298 C5orf47Q569G3 176 aa6.09□□□□□ -1.43
RTF1-205ENST00000558298 SCGB1D4Q6XE38 83 aa6.09□□□□□ -1.43
RTF1-205ENST00000558298 SIGLEC15Q6ZMC9 328 aa6.09□□□□□ -1.43
RTF1-205ENST00000558298 GTSCR1Q86UQ5 136 aa6.09□□□□□ -1.43
RTF1-205ENST00000558298 UBE2E2Q96LR5 201 aa6.09□□□□□ -1.43
RTF1-205ENST00000558298 SLC50A1Q9BRV3 221 aa6.09□□□□□ -1.43
RTF1-205ENST00000558298 MCRIP2Q9BUT9 160 aaKnown RBP6.09□□□□□ -1.43
RTF1-205ENST00000558298 TPPP3Q9BW30 176 aa6.09□□□□□ -1.43
RTF1-205ENST00000558298 DNAH3Q8TD57 4116 aa6.09□□□□□ -1.43
RTF1-205ENST00000558298 LOC107984156A0A0G2JMH3 177 aa6.08□□□□□ -1.44
RTF1-205ENST00000558298 LINC01548A6NM66 108 aa6.08□□□□□ -1.44
RTF1-205ENST00000558298 WIPF1O43516 503 aa6.08□□□□□ -1.44
RTF1-205ENST00000558298 SH2D1AO60880 128 aa6.08□□□□□ -1.44
RTF1-205ENST00000558298 HERV-K104P63124 156 aa6.08□□□□□ -1.44
RTF1-205ENST00000558298 FHL3Q13643 280 aa6.08□□□□□ -1.44
RTF1-205ENST00000558298 ARL17AQ8IVW1 177 aa6.08□□□□□ -1.44
RTF1-205ENST00000558298 C10orf126Q8N4M7 172 aa6.08□□□□□ -1.44
RTF1-205ENST00000558298 WFDC9Q8NEX5 89 aa6.08□□□□□ -1.44
RTF1-205ENST00000558298 C4orf3Q8WVX3 66 aa6.08□□□□□ -1.44
RTF1-205ENST00000558298 TPSG1Q9NRR2 321 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms