RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 CD300EQ496F6 205 aaPredicted RBP7.46□□□□□ -1.22
TMEM260-211ENST00000556648 CSTL1Q9H114 145 aa7.46□□□□□ -1.22
TMEM260-211ENST00000556648 ZMAT4Q9H898 229 aa7.46□□□□□ -1.22
TMEM260-211ENST00000556648 MAP6D1Q9H9H5 199 aa7.46□□□□□ -1.22
TMEM260-211ENST00000556648 HLA-DRB4P13762 266 aa7.45□□□□□ -1.22
TMEM260-211ENST00000556648 DEFB114Q30KQ6 69 aa7.45□□□□□ -1.22
TMEM260-211ENST00000556648 FAM74A4Q5TZK3 123 aa7.45□□□□□ -1.22
TMEM260-211ENST00000556648 SMR3AQ99954 134 aa7.45□□□□□ -1.22
TMEM260-211ENST00000556648 C20orf78Q9BR46 151 aa7.45□□□□□ -1.22
TMEM260-211ENST00000556648 HLA-DRB4X5D2U9 266 aa7.45□□□□□ -1.22
TMEM260-211ENST00000556648 IGKV2D-26A0A0A0MRZ7 120 aa7.45□□□□□ -1.22
TMEM260-211ENST00000556648 A8MTW9 85 aa7.45□□□□□ -1.22
TMEM260-211ENST00000556648 MORN3Q6PF18 240 aaPredicted RBP7.45□□□□□ -1.22
TMEM260-211ENST00000556648 PCP2Q8IVA1 136 aa7.45□□□□□ -1.22
TMEM260-211ENST00000556648 TEX29Q8N6K0 151 aa7.45□□□□□ -1.22
TMEM260-211ENST00000556648 TTTY13Q9BZ97 58 aa7.45□□□□□ -1.22
TMEM260-211ENST00000556648 CCDC168Q8NDH2 2452 aa7.45□□□□□ -1.22
TMEM260-211ENST00000556648 CBY3A6NI87 242 aa7.44□□□□□ -1.22
TMEM260-211ENST00000556648 F5H697 171 aa7.44□□□□□ -1.22
TMEM260-211ENST00000556648 ATP5LO75964 103 aa7.44□□□□□ -1.22
TMEM260-211ENST00000556648 HTN1P15515 57 aa7.44□□□□□ -1.22
TMEM260-211ENST00000556648 NMUP48645 174 aa7.44□□□□□ -1.22
TMEM260-211ENST00000556648 BVES-AS1Q5T3Y7 98 aa7.44□□□□□ -1.22
TMEM260-211ENST00000556648 CITED2Q99967 270 aaPredicted RBP7.44□□□□□ -1.22
TMEM260-211ENST00000556648 MRPL35Q9NZE8 188 aaKnown RBP7.44□□□□□ -1.22
TMEM260-211ENST00000556648 IGKCP01834 107 aa7.44□□□□□ -1.22
TMEM260-211ENST00000556648 CRYGDP07320 174 aa7.44□□□□□ -1.22
TMEM260-211ENST00000556648 GTSCR1Q86UQ5 136 aa7.44□□□□□ -1.22
TMEM260-211ENST00000556648 TOMM6Q96B49 74 aa7.44□□□□□ -1.22
TMEM260-211ENST00000556648 TMEM208Q9BTX3 173 aa7.44□□□□□ -1.22
TMEM260-211ENST00000556648 HHLA3Q9XRX5 114 aa7.44□□□□□ -1.22
TMEM260-211ENST00000556648 ZNF256Q9Y2P7 627 aaPredicted RBP7.44□□□□□ -1.22
TMEM260-211ENST00000556648 TRAV2A0A0B4J234 112 aa7.43□□□□□ -1.22
TMEM260-211ENST00000556648 FHL3Q13643 280 aa7.43□□□□□ -1.22
TMEM260-211ENST00000556648 ZNF56Q15929 161 aa7.43□□□□□ -1.22
TMEM260-211ENST00000556648 ORMDL2Q53FV1 153 aa7.43□□□□□ -1.22
TMEM260-211ENST00000556648 C2orf66Q6UXQ4 117 aa7.43□□□□□ -1.22
TMEM260-211ENST00000556648 BOD1L2Q8IYS8 172 aa7.43□□□□□ -1.22
TMEM260-211ENST00000556648 LINC01006Q8NI28 216 aa7.43□□□□□ -1.22
TMEM260-211ENST00000556648 TMEM160Q9NX00 188 aa7.43□□□□□ -1.22
TMEM260-211ENST00000556648 CCL24O00175 119 aa7.42□□□□□ -1.22
TMEM260-211ENST00000556648 DPM2O94777 84 aa7.42□□□□□ -1.22
TMEM260-211ENST00000556648 ERASQ7Z444 233 aa7.42□□□□□ -1.22
TMEM260-211ENST00000556648 SYT8Q8NBV8 401 aa7.42□□□□□ -1.22
TMEM260-211ENST00000556648 SCGB3A1Q96QR1 104 aa7.42□□□□□ -1.22
TMEM260-211ENST00000556648 ANK3Q12955 4377 aaKnown RBP7.42□□□□□ -1.22
TMEM260-211ENST00000556648 TRGV11A0A075B6L2 103 aa7.42□□□□□ -1.22
TMEM260-211ENST00000556648 A0A087WX48 190 aa7.42□□□□□ -1.22
TMEM260-211ENST00000556648 RNASE1P07998 156 aaKnown RBP7.42□□□□□ -1.22
TMEM260-211ENST00000556648 NPSP0C0P6 89 aa7.42□□□□□ -1.22
TMEM260-211ENST00000556648 ODF3L2Q3SX64 289 aa7.42□□□□□ -1.22
TMEM260-211ENST00000556648 IGHV3-73A0A0B4J1V6 119 aa7.41□□□□□ -1.22
TMEM260-211ENST00000556648 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.41□□□□□ -1.22
TMEM260-211ENST00000556648 M0QY20 66 aa7.41□□□□□ -1.22
TMEM260-211ENST00000556648 DLEU1O43261 78 aa7.41□□□□□ -1.22
TMEM260-211ENST00000556648 POLR2KP53803 58 aaKnown RBP7.41□□□□□ -1.22
TMEM260-211ENST00000556648 ZNF876PQ49A33 203 aa7.41□□□□□ -1.22
TMEM260-211ENST00000556648 ZC2HC1BQ5TFG8 222 aa7.41□□□□□ -1.22
TMEM260-211ENST00000556648 BAALCQ8WXS3 180 aa7.41□□□□□ -1.22
TMEM260-211ENST00000556648 PPP1R17O96001 155 aa7.4□□□□□ -1.22
TMEM260-211ENST00000556648 PROK1P58294 105 aa7.4□□□□□ -1.22
TMEM260-211ENST00000556648 RPL39P62891 51 aaKnown RBP7.4□□□□□ -1.22
TMEM260-211ENST00000556648 NEXN-AS1Q8NBZ9 246 aa7.4□□□□□ -1.22
TMEM260-211ENST00000556648 ACANP16112 2415 aa7.4□□□□□ -1.22
TMEM260-211ENST00000556648 MYO9AB2RTY4 2548 aa7.4□□□□□ -1.23
TMEM260-211ENST00000556648 SDHAF1A6NFY7 115 aa7.4□□□□□ -1.23
TMEM260-211ENST00000556648 TSHBP01222 138 aa7.4□□□□□ -1.23
TMEM260-211ENST00000556648 RPL32P62910 135 aaKnown RBP7.4□□□□□ -1.23
TMEM260-211ENST00000556648 ZFP2Q6ZN57 461 aa7.4□□□□□ -1.23
TMEM260-211ENST00000556648 SPAG8Q99932 426 aaPredicted RBP7.4□□□□□ -1.23
TMEM260-211ENST00000556648 C16orf95Q9H693 158 aa7.4□□□□□ -1.23
TMEM260-211ENST00000556648 TP53TG1Q9Y2A0 90 aa7.4□□□□□ -1.23
TMEM260-211ENST00000556648 COX11Q9Y6N1 276 aa7.4□□□□□ -1.23
TMEM260-211ENST00000556648 TAX1BP3O14907 124 aa7.39□□□□□ -1.23
TMEM260-211ENST00000556648 P0DMU3 169 aa7.39□□□□□ -1.23
TMEM260-211ENST00000556648 FAM231AP0DMU4 169 aa7.39□□□□□ -1.23
TMEM260-211ENST00000556648 FAM231CP0DMU5 169 aa7.39□□□□□ -1.23
TMEM260-211ENST00000556648 CHTOPQ9Y3Y2 248 aaKnown RBP7.39□□□□□ -1.23
TMEM260-211ENST00000556648 TSSC4Q9Y5U2 329 aaPredicted RBP7.39□□□□□ -1.23
TMEM260-211ENST00000556648 TRAV12-1A0A0B4J245 112 aa7.39□□□□□ -1.23
TMEM260-211ENST00000556648 TRBV6-5A0A0K0K1A5 114 aa7.39□□□□□ -1.23
TMEM260-211ENST00000556648 F8VRH5 84 aa7.39□□□□□ -1.23
TMEM260-211ENST00000556648 K7EMI3 77 aa7.39□□□□□ -1.23
TMEM260-211ENST00000556648 TMEM97Q5BJF2 176 aa7.39□□□□□ -1.23
TMEM260-211ENST00000556648 LCE2DQ5TA82 110 aaPredicted RBP7.39□□□□□ -1.23
TMEM260-211ENST00000556648 C12orf54Q6X4T0 127 aa7.39□□□□□ -1.23
TMEM260-211ENST00000556648 MAPKAPK5-AS1Q8N8E1 139 aa7.39□□□□□ -1.23
TMEM260-211ENST00000556648 ITPR2Q14571 2701 aa7.38□□□□□ -1.23
TMEM260-211ENST00000556648 PRSS29PA6NIE9 313 aa7.38□□□□□ -1.23
TMEM260-211ENST00000556648 ADARB2-AS1A8MUL3 147 aa7.38□□□□□ -1.23
TMEM260-211ENST00000556648 H7C1H1 209 aa7.38□□□□□ -1.23
TMEM260-211ENST00000556648 VCYO14598 125 aa7.38□□□□□ -1.23
TMEM260-211ENST00000556648 HILS1P60008 231 aa7.38□□□□□ -1.23
TMEM260-211ENST00000556648 C11orf72Q8NBR9 251 aa7.38□□□□□ -1.23
TMEM260-211ENST00000556648 CYSLTR1Q9Y271 337 aa7.38□□□□□ -1.23
TMEM260-211ENST00000556648 HELZ2Q9BYK8 2649 aaKnown RBP7.37□□□□□ -1.23
TMEM260-211ENST00000556648 TRBV27A0A0K0K1C4 114 aa7.37□□□□□ -1.23
TMEM260-211ENST00000556648 INSP01308 110 aa7.37□□□□□ -1.23
TMEM260-211ENST00000556648 Q6ZSN1 163 aa7.37□□□□□ -1.23
TMEM260-211ENST00000556648 ORAOV1Q8WV07 137 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms