RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 PKIAP61925 76 aa10.78□□□□□ -0.68
VPS33B-205ENST00000556096 HSPB8Q9UJY1 196 aa10.78□□□□□ -0.68
VPS33B-205ENST00000556096 VWFP04275 2813 aa10.77□□□□□ -0.69
VPS33B-205ENST00000556096 MUC4Q99102 2169 aa10.77□□□□□ -0.69
VPS33B-205ENST00000556096 TRAV26-2A0A0B4J265 109 aa10.77□□□□□ -0.69
VPS33B-205ENST00000556096 SMIM17P0DL12 118 aa10.77□□□□□ -0.69
VPS33B-205ENST00000556096 LINC00315P59091 139 aa10.77□□□□□ -0.69
VPS33B-205ENST00000556096 Q8N8P6 123 aa10.77□□□□□ -0.69
VPS33B-205ENST00000556096 TMEM70Q9BUB7 260 aa10.77□□□□□ -0.69
VPS33B-205ENST00000556096 IGLV2-18A0A075B6J9 118 aa10.76□□□□□ -0.69
VPS33B-205ENST00000556096 PPP1R17O96001 155 aa10.76□□□□□ -0.69
VPS33B-205ENST00000556096 NUTF2P61970 127 aaKnown RBP10.76□□□□□ -0.69
VPS33B-205ENST00000556096 ZNF664Q8N3J9 261 aa10.76□□□□□ -0.69
VPS33B-205ENST00000556096 C19orf73Q9NVV2 129 aa10.76□□□□□ -0.69
VPS33B-205ENST00000556096 TRRAPQ9Y4A5 3859 aa10.76□□□□□ -0.69
VPS33B-205ENST00000556096 A0A096LNJ9 63 aa10.75□□□□□ -0.69
VPS33B-205ENST00000556096 INSL3P51460 131 aa10.75□□□□□ -0.69
VPS33B-205ENST00000556096 SHISA2Q6UWI4 295 aa10.75□□□□□ -0.69
VPS33B-205ENST00000556096 RASL10AQ92737 203 aa10.75□□□□□ -0.69
VPS33B-205ENST00000556096 PTH2Q96A98 100 aa10.75□□□□□ -0.69
VPS33B-205ENST00000556096 C20orf78Q9BR46 151 aa10.75□□□□□ -0.69
VPS33B-205ENST00000556096 TSTD3H0UI37 97 aa10.75□□□□□ -0.69
VPS33B-205ENST00000556096 MGPP08493 103 aa10.75□□□□□ -0.69
VPS33B-205ENST00000556096 PIK3CD-AS1Q5SR53 167 aa10.75□□□□□ -0.69
VPS33B-205ENST00000556096 LINC00173Q6ZV60 143 aa10.75□□□□□ -0.69
VPS33B-205ENST00000556096 LINC01587Q99440 93 aa10.75□□□□□ -0.69
VPS33B-205ENST00000556096 JPT2Q9H910 190 aa10.75□□□□□ -0.69
VPS33B-205ENST00000556096 SYS1-DBNDD2H3BUS1 97 aa10.74□□□□□ -0.69
VPS33B-205ENST00000556096 HBDP02042 147 aa10.74□□□□□ -0.69
VPS33B-205ENST00000556096 MAP1LC3CQ9BXW4 147 aa10.74□□□□□ -0.69
VPS33B-205ENST00000556096 ZNF415Q09FC8 603 aa10.73□□□□□ -0.69
VPS33B-205ENST00000556096 ZNF876PQ49A33 203 aa10.73□□□□□ -0.69
VPS33B-205ENST00000556096 PET117Q6UWS5 81 aa10.73□□□□□ -0.69
VPS33B-205ENST00000556096 XCL2Q9UBD3 114 aa10.73□□□□□ -0.69
VPS33B-205ENST00000556096 CRYGDP07320 174 aa10.72□□□□□ -0.69
VPS33B-205ENST00000556096 FCER1GP30273 86 aa10.72□□□□□ -0.69
VPS33B-205ENST00000556096 SPATA12Q7Z6I5 190 aa10.72□□□□□ -0.69
VPS33B-205ENST00000556096 HTN1P15515 57 aa10.72□□□□□ -0.69
VPS33B-205ENST00000556096 SUMO2P61956 95 aaKnown RBP10.72□□□□□ -0.69
VPS33B-205ENST00000556096 C9orf66Q5T8R8 295 aa10.72□□□□□ -0.69
VPS33B-205ENST00000556096 C1orf158Q8N1D5 194 aa10.72□□□□□ -0.69
VPS33B-205ENST00000556096 SPXQ9BT56 116 aa10.72□□□□□ -0.69
VPS33B-205ENST00000556096 SMIM2Q9BVW6 85 aa10.72□□□□□ -0.69
VPS33B-205ENST00000556096 PRO1933Q9H354 126 aa10.72□□□□□ -0.69
VPS33B-205ENST00000556096 CMYA5Q8N3K9 4069 aa10.71□□□□□ -0.69
VPS33B-205ENST00000556096 A0A087WWL8 130 aa10.71□□□□□ -0.69
VPS33B-205ENST00000556096 C20orf202A1L168 122 aa10.71□□□□□ -0.69
VPS33B-205ENST00000556096 K7EMI3 77 aa10.71□□□□□ -0.69
VPS33B-205ENST00000556096 M0R2P5 195 aa10.71□□□□□ -0.69
VPS33B-205ENST00000556096 RPL32P62910 135 aaKnown RBP10.71□□□□□ -0.69
VPS33B-205ENST00000556096 SUMO4Q6EEV6 95 aa10.71□□□□□ -0.69
VPS33B-205ENST00000556096 C11orf72Q8NBR9 251 aa10.71□□□□□ -0.69
VPS33B-205ENST00000556096 RPL39LQ96EH5 51 aaKnown RBP10.71□□□□□ -0.69
VPS33B-205ENST00000556096 VAMP8Q9BV40 100 aa10.71□□□□□ -0.69
VPS33B-205ENST00000556096 KIR2DL5BA0A0G2JN68 375 aa10.7□□□□□ -0.7
VPS33B-205ENST00000556096 KIR2DL5BA0A0G2JPC4 375 aa10.7□□□□□ -0.7
VPS33B-205ENST00000556096 LAGE3Q14657 143 aa10.7□□□□□ -0.7
VPS33B-205ENST00000556096 KIR2DL5AQ8N109 375 aa10.7□□□□□ -0.7
VPS33B-205ENST00000556096 LINC00587B1AMM8 73 aa10.7□□□□□ -0.7
VPS33B-205ENST00000556096 MORN3Q6PF18 240 aaPredicted RBP10.7□□□□□ -0.7
VPS33B-205ENST00000556096 TMEM208Q9BTX3 173 aa10.7□□□□□ -0.7
VPS33B-205ENST00000556096 F5H697 171 aa10.69□□□□□ -0.7
VPS33B-205ENST00000556096 PRM2P04554 102 aa10.69□□□□□ -0.7
VPS33B-205ENST00000556096 GIG44P09565 113 aaPredicted RBP10.69□□□□□ -0.7
VPS33B-205ENST00000556096 NDUFAF3Q9BU61 184 aa10.69□□□□□ -0.7
VPS33B-205ENST00000556096 C1QTNF4Q9BXJ3 329 aa10.69□□□□□ -0.7
VPS33B-205ENST00000556096 WFDC10AQ9H1F0 79 aa10.69□□□□□ -0.7
VPS33B-205ENST00000556096 TRBV6-5A0A0K0K1A5 114 aa10.68□□□□□ -0.7
VPS33B-205ENST00000556096 A8MWV9 139 aa10.68□□□□□ -0.7
VPS33B-205ENST00000556096 FAM74A4Q5TZK3 123 aa10.68□□□□□ -0.7
VPS33B-205ENST00000556096 LINC01545Q5VT33 79 aa10.68□□□□□ -0.7
VPS33B-205ENST00000556096 ST20Q9HBF5 79 aa10.68□□□□□ -0.7
VPS33B-205ENST00000556096 TCAPO15273 167 aa10.67□□□□□ -0.7
VPS33B-205ENST00000556096 DDTP30046 118 aa10.67□□□□□ -0.7
VPS33B-205ENST00000556096 ORMDL2Q53FV1 153 aa10.67□□□□□ -0.7
VPS33B-205ENST00000556096 IFI27L1Q96BM0 104 aa10.67□□□□□ -0.7
VPS33B-205ENST00000556096 MCRIP2Q9BUT9 160 aaKnown RBP10.67□□□□□ -0.7
VPS33B-205ENST00000556096 EDA2RQ9HAV5 297 aa10.67□□□□□ -0.7
VPS33B-205ENST00000556096 PAM16Q9Y3D7 125 aa10.67□□□□□ -0.7
VPS33B-205ENST00000556096 M0QY20 66 aa10.67□□□□□ -0.7
VPS33B-205ENST00000556096 POLR2KP53803 58 aaKnown RBP10.67□□□□□ -0.7
VPS33B-205ENST00000556096 ZNF56Q15929 161 aa10.67□□□□□ -0.7
VPS33B-205ENST00000556096 WFDC9Q8NEX5 89 aa10.67□□□□□ -0.7
VPS33B-205ENST00000556096 GOLT1BQ9Y3E0 138 aa10.67□□□□□ -0.7
VPS33B-205ENST00000556096 TRAV9-2A0A087WT02 112 aa10.66□□□□□ -0.7
VPS33B-205ENST00000556096 RPL35AP18077 110 aaKnown RBP10.66□□□□□ -0.7
VPS33B-205ENST00000556096 AZU1P20160 251 aa10.66□□□□□ -0.7
VPS33B-205ENST00000556096 UFSP1Q6NVU6 142 aa10.66□□□□□ -0.7
VPS33B-205ENST00000556096 GTSCR1Q86UQ5 136 aa10.66□□□□□ -0.7
VPS33B-205ENST00000556096 IL17DQ8TAD2 202 aa10.66□□□□□ -0.7
VPS33B-205ENST00000556096 CSTL1Q9H114 145 aa10.66□□□□□ -0.7
VPS33B-205ENST00000556096 VCYO14598 125 aa10.65□□□□□ -0.7
VPS33B-205ENST00000556096 LGALS9BQ3B8N2 356 aa10.65□□□□□ -0.7
VPS33B-205ENST00000556096 SPATA45Q537H7 98 aa10.65□□□□□ -0.7
VPS33B-205ENST00000556096 LGALS9CQ6DKI2 356 aa10.65□□□□□ -0.7
VPS33B-205ENST00000556096 ATOH7Q8N100 152 aa10.65□□□□□ -0.7
VPS33B-205ENST00000556096 RNASE8Q8TDE3 154 aaKnown RBP10.65□□□□□ -0.7
VPS33B-205ENST00000556096 IGHV3OR16-12A0A075B7B8 117 aa10.64□□□□□ -0.71
VPS33B-205ENST00000556096 ATP5LO75964 103 aa10.64□□□□□ -0.71
VPS33B-205ENST00000556096 NUDT3O95989 172 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms