RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 FAM104BQ5XKR9 115 aa9.34□□□□□ -0.91
ARHGEF40-206ENST00000555232 Q6AWC8 147 aa9.34□□□□□ -0.91
ARHGEF40-206ENST00000555232 ATP5L2Q7Z4Y8 100 aa9.34□□□□□ -0.91
ARHGEF40-206ENST00000555232 A6NDX4 124 aa9.34□□□□□ -0.91
ARHGEF40-206ENST00000555232 APOMO95445 188 aa9.34□□□□□ -0.91
ARHGEF40-206ENST00000555232 LOXL1Q08397 574 aaPredicted RBP9.34□□□□□ -0.91
ARHGEF40-206ENST00000555232 ZNF48Q96MX3 618 aaPredicted RBP9.34□□□□□ -0.91
ARHGEF40-206ENST00000555232 VWC2LB2RUY7 222 aa9.33□□□□□ -0.92
ARHGEF40-206ENST00000555232 SIGLEC8Q9NYZ4 499 aa9.33□□□□□ -0.92
ARHGEF40-206ENST00000555232 TNFRSF18Q9Y5U5 241 aa9.33□□□□□ -0.92
ARHGEF40-206ENST00000555232 ETDBQ3ZM63 59 aa9.33□□□□□ -0.92
ARHGEF40-206ENST00000555232 SAMD5Q5TGI4 173 aa9.33□□□□□ -0.92
ARHGEF40-206ENST00000555232 SH2D6Q7Z4S9 175 aa9.33□□□□□ -0.92
ARHGEF40-206ENST00000555232 TTTY13Q9BZ97 58 aa9.33□□□□□ -0.92
ARHGEF40-206ENST00000555232 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.33□□□□□ -0.92
ARHGEF40-206ENST00000555232 RPL39LQ96EH5 51 aaKnown RBP9.33□□□□□ -0.92
ARHGEF40-206ENST00000555232 FAM231DQ6ZW35 169 aa9.32□□□□□ -0.92
ARHGEF40-206ENST00000555232 CITED1Q99966 193 aa9.32□□□□□ -0.92
ARHGEF40-206ENST00000555232 CITED2Q99967 270 aaPredicted RBP9.32□□□□□ -0.92
ARHGEF40-206ENST00000555232 SPENQ96T58 3664 aaKnown RBP9.32□□□□□ -0.92
ARHGEF40-206ENST00000555232 K7ERJ3 54 aa9.32□□□□□ -0.92
ARHGEF40-206ENST00000555232 TMEM190Q8WZ59 177 aa9.32□□□□□ -0.92
ARHGEF40-206ENST00000555232 C20orf173Q96LM9 149 aa9.32□□□□□ -0.92
ARHGEF40-206ENST00000555232 ESM1Q9NQ30 184 aa9.32□□□□□ -0.92
ARHGEF40-206ENST00000555232 A0A096LPF7 62 aa9.32□□□□□ -0.92
ARHGEF40-206ENST00000555232 A0A1W2PPM0 123 aa9.32□□□□□ -0.92
ARHGEF40-206ENST00000555232 TMEM262E9PQX1 116 aa9.32□□□□□ -0.92
ARHGEF40-206ENST00000555232 LINC01619G3V211 115 aa9.32□□□□□ -0.92
ARHGEF40-206ENST00000555232 H3BRM9 83 aa9.32□□□□□ -0.92
ARHGEF40-206ENST00000555232 UFSP1Q6NVU6 142 aa9.32□□□□□ -0.92
ARHGEF40-206ENST00000555232 PET117Q6UWS5 81 aa9.32□□□□□ -0.92
ARHGEF40-206ENST00000555232 TMEM61Q8N0U2 210 aa9.32□□□□□ -0.92
ARHGEF40-206ENST00000555232 INS-IGF2F8WCM5 200 aa9.31□□□□□ -0.92
ARHGEF40-206ENST00000555232 GAS8-AS1O95177 125 aa9.31□□□□□ -0.92
ARHGEF40-206ENST00000555232 COX8AP10176 69 aa9.31□□□□□ -0.92
ARHGEF40-206ENST00000555232 NPC2P61916 151 aa9.31□□□□□ -0.92
ARHGEF40-206ENST00000555232 WFDC2Q14508 124 aa9.31□□□□□ -0.92
ARHGEF40-206ENST00000555232 C2orf91Q6ZV80 131 aa9.31□□□□□ -0.92
ARHGEF40-206ENST00000555232 URB1-AS1Q96HZ7 61 aa9.31□□□□□ -0.92
ARHGEF40-206ENST00000555232 NHP2Q9NX24 153 aaKnown RBP9.31□□□□□ -0.92
ARHGEF40-206ENST00000555232 ZNF492Q9P255 531 aa9.31□□□□□ -0.92
ARHGEF40-206ENST00000555232 OR5A1Q8NGJ0 315 aa9.3□□□□□ -0.92
ARHGEF40-206ENST00000555232 DLX4Q92988 240 aaPredicted RBP9.3□□□□□ -0.92
ARHGEF40-206ENST00000555232 COL27A1Q8IZC6 1860 aaPredicted RBP9.3□□□□□ -0.92
ARHGEF40-206ENST00000555232 MRPL16Q9NX20 251 aaKnown RBP9.3□□□□□ -0.92
ARHGEF40-206ENST00000555232 DEFB4AO15263 64 aa9.3□□□□□ -0.92
ARHGEF40-206ENST00000555232 ODF1Q14990 250 aa9.3□□□□□ -0.92
ARHGEF40-206ENST00000555232 F8W735 103 aaPredicted RBP9.29□□□□□ -0.92
ARHGEF40-206ENST00000555232 ZC2HC1BQ5TFG8 222 aa9.29□□□□□ -0.92
ARHGEF40-206ENST00000555232 AMTNQ6UX39 209 aa9.29□□□□□ -0.92
ARHGEF40-206ENST00000555232 Q8N6K4 173 aa9.29□□□□□ -0.92
ARHGEF40-206ENST00000555232 TOMM7Q9P0U1 55 aa9.29□□□□□ -0.92
ARHGEF40-206ENST00000555232 NPIPB6E9PJ23 425 aa9.29□□□□□ -0.92
ARHGEF40-206ENST00000555232 CCL24O00175 119 aa9.29□□□□□ -0.92
ARHGEF40-206ENST00000555232 SMIM13P0DJ93 91 aa9.29□□□□□ -0.92
ARHGEF40-206ENST00000555232 DKK2Q9UBU2 259 aa9.29□□□□□ -0.92
ARHGEF40-206ENST00000555232 CD28P10747 220 aa9.29□□□□□ -0.92
ARHGEF40-206ENST00000555232 ZFAND3Q9H8U3 227 aa9.29□□□□□ -0.92
ARHGEF40-206ENST00000555232 MDFICQ9P1T7 246 aa9.29□□□□□ -0.92
ARHGEF40-206ENST00000555232 SUMO2P61956 95 aaKnown RBP9.28□□□□□ -0.92
ARHGEF40-206ENST00000555232 PIFOQ8TCI5 191 aa9.28□□□□□ -0.92
ARHGEF40-206ENST00000555232 DNAJC9-AS1A6NH13 148 aa9.28□□□□□ -0.92
ARHGEF40-206ENST00000555232 INAFM1C9JVW0 142 aa9.28□□□□□ -0.92
ARHGEF40-206ENST00000555232 PCP2Q8IVA1 136 aa9.28□□□□□ -0.92
ARHGEF40-206ENST00000555232 KLF12Q9Y4X4 402 aa9.28□□□□□ -0.92
ARHGEF40-206ENST00000555232 H3BMG7 143 aa9.27□□□□□ -0.92
ARHGEF40-206ENST00000555232 LGALS1P09382 135 aaKnown RBP9.27□□□□□ -0.92
ARHGEF40-206ENST00000555232 LGALS3P17931 250 aaKnown RBP9.27□□□□□ -0.92
ARHGEF40-206ENST00000555232 EBI3Q14213 229 aa9.27□□□□□ -0.92
ARHGEF40-206ENST00000555232 MLST8Q9BVC4 326 aa9.27□□□□□ -0.92
ARHGEF40-206ENST00000555232 WFDC10AQ9H1F0 79 aa9.27□□□□□ -0.92
ARHGEF40-206ENST00000555232 DPH3P1Q9H4G8 78 aa9.27□□□□□ -0.92
ARHGEF40-206ENST00000555232 NIPBLQ6KC79 2804 aaeCLIP9.27□□□□□ -0.93
ARHGEF40-206ENST00000555232 ATP5LO75964 103 aa9.27□□□□□ -0.93
ARHGEF40-206ENST00000555232 KLF5Q13887 457 aaPredicted RBP9.27□□□□□ -0.93
ARHGEF40-206ENST00000555232 J3QLI3 93 aa9.27□□□□□ -0.93
ARHGEF40-206ENST00000555232 DUSP14O95147 198 aaKnown RBP9.27□□□□□ -0.93
ARHGEF40-206ENST00000555232 GAGE7O76087 117 aa9.26□□□□□ -0.93
ARHGEF40-206ENST00000555232 IGLV2-11P01706 119 aa9.26□□□□□ -0.93
ARHGEF40-206ENST00000555232 GAGE12FP0CL80 117 aa9.26□□□□□ -0.93
ARHGEF40-206ENST00000555232 GAGE12GP0CL81 117 aa9.26□□□□□ -0.93
ARHGEF40-206ENST00000555232 GAGE12IP0CL82 117 aa9.26□□□□□ -0.93
ARHGEF40-206ENST00000555232 C19orf71A6NCJ1 209 aa9.26□□□□□ -0.93
ARHGEF40-206ENST00000555232 ELANEP08246 267 aa9.26□□□□□ -0.93
ARHGEF40-206ENST00000555232 LAGE3Q14657 143 aa9.26□□□□□ -0.93
ARHGEF40-206ENST00000555232 CHCHD1Q96BP2 118 aaKnown RBP9.26□□□□□ -0.93
ARHGEF40-206ENST00000555232 MBD6Q96DN6 1003 aa9.26□□□□□ -0.93
ARHGEF40-206ENST00000555232 ZNF625Q96I27 306 aaPredicted RBP9.26□□□□□ -0.93
ARHGEF40-206ENST00000555232 C11orf68Q9H3H3 251 aaKnown RBP9.26□□□□□ -0.93
ARHGEF40-206ENST00000555232 NXT2Q9NPJ8 142 aaKnown RBP9.26□□□□□ -0.93
ARHGEF40-206ENST00000555232 C11orf21Q9P2W6 132 aa9.26□□□□□ -0.93
ARHGEF40-206ENST00000555232 A0A1B0GW15 77 aa9.26□□□□□ -0.93
ARHGEF40-206ENST00000555232 PRR9Q5T870 116 aa9.26□□□□□ -0.93
ARHGEF40-206ENST00000555232 TRGV4A0A0C4DH28 118 aa9.25□□□□□ -0.93
ARHGEF40-206ENST00000555232 A0A1B0GWB2 263 aa9.25□□□□□ -0.93
ARHGEF40-206ENST00000555232 INSL3P51460 131 aa9.25□□□□□ -0.93
ARHGEF40-206ENST00000555232 UBE2L6O14933 153 aa9.25□□□□□ -0.93
ARHGEF40-206ENST00000555232 Q8N1Y9 231 aa9.25□□□□□ -0.93
ARHGEF40-206ENST00000555232 SDHAF1A6NFY7 115 aa9.25□□□□□ -0.93
ARHGEF40-206ENST00000555232 GFRA4Q9GZZ7 299 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms