RNA–Protein interactions for RNA: ENST00000554913.5

XRCC3-209, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene XRCC3, Length 2,539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-209ENST00000554913 ARL17AQ8IVW1 177 aa12.43□□□□□ -0.42
XRCC3-209ENST00000554913 CD7P09564 240 aa12.42□□□□□ -0.42
XRCC3-209ENST00000554913 SCGB1A1P11684 91 aa12.42□□□□□ -0.42
XRCC3-209ENST00000554913 CFAP126Q5VTH2 177 aa12.42□□□□□ -0.42
XRCC3-209ENST00000554913 DLX4Q92988 240 aaPredicted RBP12.42□□□□□ -0.42
XRCC3-209ENST00000554913 CRYBG3Q68DQ2 2970 aa12.42□□□□□ -0.42
XRCC3-209ENST00000554913 ZFYVE26Q68DK2 2539 aa12.42□□□□□ -0.42
XRCC3-209ENST00000554913 A0A0J9YY99 117 aa12.42□□□□□ -0.42
XRCC3-209ENST00000554913 F5H697 171 aa12.42□□□□□ -0.42
XRCC3-209ENST00000554913 PSMB2P49721 201 aa12.42□□□□□ -0.42
XRCC3-209ENST00000554913 TSPEAR-AS2P59090 65 aa12.42□□□□□ -0.42
XRCC3-209ENST00000554913 BLCAPP62952 87 aa12.42□□□□□ -0.42
XRCC3-209ENST00000554913 PMVKQ15126 192 aa12.42□□□□□ -0.42
XRCC3-209ENST00000554913 FAM159AQ6UWV7 190 aa12.41□□□□□ -0.42
XRCC3-209ENST00000554913 USMG5Q96IX5 58 aa12.41□□□□□ -0.42
XRCC3-209ENST00000554913 KLLNB2CW77 178 aa12.41□□□□□ -0.42
XRCC3-209ENST00000554913 IGHV4-38-2P0DP08 117 aa12.41□□□□□ -0.42
XRCC3-209ENST00000554913 UTP20O75691 2785 aaKnown RBP12.4□□□□□ -0.42
XRCC3-209ENST00000554913 TRBV7-9A0A0J9YWB2 115 aa12.4□□□□□ -0.42
XRCC3-209ENST00000554913 TRAV12-3A0A0B4J271 114 aa12.4□□□□□ -0.42
XRCC3-209ENST00000554913 IGHV4-39P01824 125 aa12.4□□□□□ -0.42
XRCC3-209ENST00000554913 IGHG2P01859 326 aa12.4□□□□□ -0.42
XRCC3-209ENST00000554913 HERVK_113P61574 105 aa12.4□□□□□ -0.42
XRCC3-209ENST00000554913 FOXI1Q12951 378 aa12.4□□□□□ -0.42
XRCC3-209ENST00000554913 TMEM170BQ5T4T1 132 aa12.4□□□□□ -0.42
XRCC3-209ENST00000554913 ZNRF2Q8NHG8 242 aa12.4□□□□□ -0.42
XRCC3-209ENST00000554913 CSMD2Q7Z408 3487 aa12.39□□□□□ -0.43
XRCC3-209ENST00000554913 SDHAF1A6NFY7 115 aa12.39□□□□□ -0.43
XRCC3-209ENST00000554913 H3BUX3 64 aa12.39□□□□□ -0.43
XRCC3-209ENST00000554913 VCYO14598 125 aa12.39□□□□□ -0.43
XRCC3-209ENST00000554913 RPL32P62910 135 aaKnown RBP12.39□□□□□ -0.43
XRCC3-209ENST00000554913 CLEC2AQ6UVW9 174 aa12.39□□□□□ -0.43
XRCC3-209ENST00000554913 NFE4Q86UQ8 179 aa12.39□□□□□ -0.43
XRCC3-209ENST00000554913 NDUFA11Q86Y39 141 aa12.39□□□□□ -0.43
XRCC3-209ENST00000554913 ZNF418Q8TF45 676 aaPredicted RBP12.39□□□□□ -0.43
XRCC3-209ENST00000554913 KIR2DL4Q99706 377 aa12.39□□□□□ -0.43
XRCC3-209ENST00000554913 UBE2D3P61077 147 aa12.39□□□□□ -0.43
XRCC3-209ENST00000554913 UBE2D2P62837 147 aa12.39□□□□□ -0.43
XRCC3-209ENST00000554913 FAM74A4Q5TZK3 123 aa12.39□□□□□ -0.43
XRCC3-209ENST00000554913 PTH2Q96A98 100 aa12.39□□□□□ -0.43
XRCC3-209ENST00000554913 C1QTNF4Q9BXJ3 329 aa12.39□□□□□ -0.43
XRCC3-209ENST00000554913 DAZ1Q9NQZ3 744 aaKnown RBP12.39□□□□□ -0.43
XRCC3-209ENST00000554913 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.38□□□□□ -0.433e-6■■■□□ 15.8
XRCC3-209ENST00000554913 C19orf84I3L1E1 186 aa12.38□□□□□ -0.43
XRCC3-209ENST00000554913 CIDEAO60543 219 aa12.38□□□□□ -0.43
XRCC3-209ENST00000554913 PAPPA-AS1Q5QFB9 102 aa12.38□□□□□ -0.43
XRCC3-209ENST00000554913 IGHV4-61A0A0C4DH41 118 aa12.37□□□□□ -0.43
XRCC3-209ENST00000554913 TMEM141Q96I45 108 aa12.37□□□□□ -0.43
XRCC3-209ENST00000554913 ZNF256Q9Y2P7 627 aaPredicted RBP12.37□□□□□ -0.43
XRCC3-209ENST00000554913 H3BUA1 57 aa12.37□□□□□ -0.43
XRCC3-209ENST00000554913 IGHV3-30P01768 117 aa12.37□□□□□ -0.43
XRCC3-209ENST00000554913 IGHV3-30-5P0DP03 117 aa12.37□□□□□ -0.43
XRCC3-209ENST00000554913 TIMM17AQ99595 171 aa12.37□□□□□ -0.43
XRCC3-209ENST00000554913 OPRPNQ99935 248 aaPredicted RBP12.37□□□□□ -0.43
XRCC3-209ENST00000554913 CFC1BP0CG36 223 aa12.36□□□□□ -0.43
XRCC3-209ENST00000554913 CFC1P0CG37 223 aa12.36□□□□□ -0.43
XRCC3-209ENST00000554913 SYT8Q8NBV8 401 aa12.36□□□□□ -0.43
XRCC3-209ENST00000554913 CELSR2Q9HCU4 2923 aa12.36□□□□□ -0.43
XRCC3-209ENST00000554913 USP9XQ93008 2570 aaPredicted RBP12.36□□□□□ -0.43
XRCC3-209ENST00000554913 ZNF876PQ49A33 203 aa12.36□□□□□ -0.43
XRCC3-209ENST00000554913 DCANP1Q8TF63 244 aa12.36□□□□□ -0.43
XRCC3-209ENST00000554913 AMELXQ99217 191 aa12.36□□□□□ -0.43
XRCC3-209ENST00000554913 USP24Q9UPU5 2620 aa12.35□□□□□ -0.43
XRCC3-209ENST00000554913 SPG11Q96JI7 2443 aa12.35□□□□□ -0.43
XRCC3-209ENST00000554913 TRBV27A0A0K0K1C4 114 aa12.35□□□□□ -0.43
XRCC3-209ENST00000554913 A6NDX4 124 aa12.35□□□□□ -0.43
XRCC3-209ENST00000554913 BRI3O95415 125 aa12.35□□□□□ -0.43
XRCC3-209ENST00000554913 TCL1BO95988 128 aa12.35□□□□□ -0.43
XRCC3-209ENST00000554913 IGKV3-20P01619 116 aa12.35□□□□□ -0.43
XRCC3-209ENST00000554913 SLC25A29Q8N8R3 303 aa12.35□□□□□ -0.43
XRCC3-209ENST00000554913 MDFICQ9P1T7 246 aa12.35□□□□□ -0.43
XRCC3-209ENST00000554913 TRAV12-2A0A075B6T6 113 aa12.35□□□□□ -0.43
XRCC3-209ENST00000554913 TGFAP01135 160 aa12.35□□□□□ -0.43
XRCC3-209ENST00000554913 ATP6V0E2Q8NHE4 81 aa12.35□□□□□ -0.43
XRCC3-209ENST00000554913 SORL1Q92673 2214 aa12.34□□□□□ -0.43
XRCC3-209ENST00000554913 LGALS9O00182 355 aa12.34□□□□□ -0.43
XRCC3-209ENST00000554913 IGLV1-40P01703 118 aa12.34□□□□□ -0.43
XRCC3-209ENST00000554913 CDIP1Q9H305 208 aa12.34□□□□□ -0.43
XRCC3-209ENST00000554913 J3QQQ9 107 aa12.34□□□□□ -0.43
XRCC3-209ENST00000554913 ID1P41134 155 aa12.34□□□□□ -0.43
XRCC3-209ENST00000554913 FHL3Q13643 280 aa12.34□□□□□ -0.43
XRCC3-209ENST00000554913 ZNF688P0C7X2 276 aa12.33□□□□□ -0.44
XRCC3-209ENST00000554913 TMEM95Q3KNT9 176 aa12.33□□□□□ -0.44
XRCC3-209ENST00000554913 CSPG4Q6UVK1 2322 aa12.33□□□□□ -0.44
XRCC3-209ENST00000554913 IGHV3-16A0A0C4DH30 117 aa12.33□□□□□ -0.44
XRCC3-209ENST00000554913 CARD19Q96LW7 228 aa12.33□□□□□ -0.44
XRCC3-209ENST00000554913 TRBV6-5A0A0K0K1A5 114 aa12.32□□□□□ -0.44
XRCC3-209ENST00000554913 ZNF56Q15929 161 aa12.32□□□□□ -0.44
XRCC3-209ENST00000554913 C10orf126Q8N4M7 172 aa12.32□□□□□ -0.44
XRCC3-209ENST00000554913 MYO18BQ8IUG5 2567 aa12.32□□□□□ -0.44
XRCC3-209ENST00000554913 M0QY20 66 aa12.32□□□□□ -0.44
XRCC3-209ENST00000554913 GNLYP22749 145 aa12.32□□□□□ -0.44
XRCC3-209ENST00000554913 C9orf85Q96MD7 179 aa12.32□□□□□ -0.44
XRCC3-209ENST00000554913 LGALS3P17931 250 aaKnown RBP12.31□□□□□ -0.44
XRCC3-209ENST00000554913 P0DMU3 169 aa12.31□□□□□ -0.44
XRCC3-209ENST00000554913 FAM231AP0DMU4 169 aa12.31□□□□□ -0.44
XRCC3-209ENST00000554913 FAM231CP0DMU5 169 aa12.31□□□□□ -0.44
XRCC3-209ENST00000554913 Q8N1Y9 231 aa12.31□□□□□ -0.44
XRCC3-209ENST00000554913 IGHV3-64A0A075B6Q5 118 aa12.3□□□□□ -0.44
XRCC3-209ENST00000554913 A0A1B0GV72 72 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms