RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 KLHL30-AS1Q8NEE0 82 aa7.2□□□□□ -1.26
SYNE2-213ENST00000554805 PGPEP1Q9NXJ5 209 aa7.2□□□□□ -1.26
SYNE2-213ENST00000554805 HELZ2Q9BYK8 2649 aaKnown RBP7.19□□□□□ -1.26
SYNE2-213ENST00000554805 TRAV12-3A0A0B4J271 114 aa7.19□□□□□ -1.26
SYNE2-213ENST00000554805 TMEM238C9JI98 176 aa7.19□□□□□ -1.26
SYNE2-213ENST00000554805 DUSP14O95147 198 aaKnown RBP7.19□□□□□ -1.26
SYNE2-213ENST00000554805 SMAGPQ0VAQ4 97 aa7.19□□□□□ -1.26
SYNE2-213ENST00000554805 RRN3P1Q2M238 152 aa7.19□□□□□ -1.26
SYNE2-213ENST00000554805 TMEM170BQ5T4T1 132 aa7.19□□□□□ -1.26
SYNE2-213ENST00000554805 SAMD13Q5VXD3 122 aa7.19□□□□□ -1.26
SYNE2-213ENST00000554805 TSSC4Q9Y5U2 329 aaPredicted RBP7.19□□□□□ -1.26
SYNE2-213ENST00000554805 FLNBO75369 2602 aaKnown RBP7.19□□□□□ -1.26
SYNE2-213ENST00000554805 NACAE9PAV3 2078 aa7.19□□□□□ -1.26
SYNE2-213ENST00000554805 IGHV4-38-2P0DP08 117 aa7.19□□□□□ -1.26
SYNE2-213ENST00000554805 HERVK_113P61574 105 aa7.19□□□□□ -1.26
SYNE2-213ENST00000554805 NEXN-AS1Q8NBZ9 246 aa7.19□□□□□ -1.26
SYNE2-213ENST00000554805 TP53TG1Q9Y2A0 90 aa7.19□□□□□ -1.26
SYNE2-213ENST00000554805 ZNF256Q9Y2P7 627 aaPredicted RBP7.19□□□□□ -1.26
SYNE2-213ENST00000554805 PPP1R17O96001 155 aa7.18□□□□□ -1.26
SYNE2-213ENST00000554805 LGALS1P09382 135 aaKnown RBP7.18□□□□□ -1.26
SYNE2-213ENST00000554805 GPHB5Q86YW7 130 aa7.18□□□□□ -1.26
SYNE2-213ENST00000554805 KIR2DL4Q99706 377 aa7.18□□□□□ -1.26
SYNE2-213ENST00000554805 JMJD1CQ15652 2540 aa7.18□□□□□ -1.26
SYNE2-213ENST00000554805 IGHV4-39P01824 125 aa7.18□□□□□ -1.26
SYNE2-213ENST00000554805 ID1P41134 155 aa7.18□□□□□ -1.26
SYNE2-213ENST00000554805 ANKRD17O75179 2603 aaKnown RBP7.18□□□□□ -1.26
SYNE2-213ENST00000554805 IGHV4-61A0A0C4DH41 118 aa7.18□□□□□ -1.26
SYNE2-213ENST00000554805 LINC01549A6NIU2 74 aa7.18□□□□□ -1.26
SYNE2-213ENST00000554805 F8W1H4 67 aa7.18□□□□□ -1.26
SYNE2-213ENST00000554805 USMG5Q96IX5 58 aa7.18□□□□□ -1.26
SYNE2-213ENST00000554805 PIMREGQ9BSJ6 248 aa7.18□□□□□ -1.26
SYNE2-213ENST00000554805 ZNF688P0C7X2 276 aa7.17□□□□□ -1.26
SYNE2-213ENST00000554805 PSMB2P49721 201 aa7.17□□□□□ -1.26
SYNE2-213ENST00000554805 PLEKHB2Q96CS7 222 aa7.17□□□□□ -1.26
SYNE2-213ENST00000554805 SIGMAR1Q99720 223 aa7.17□□□□□ -1.26
SYNE2-213ENST00000554805 TRBV7-3A0A075B6L6 115 aa7.17□□□□□ -1.26
SYNE2-213ENST00000554805 RPL39P62891 51 aaKnown RBP7.17□□□□□ -1.26
SYNE2-213ENST00000554805 ZNF56Q15929 161 aa7.17□□□□□ -1.26
SYNE2-213ENST00000554805 PRORYQ9H606 182 aa7.17□□□□□ -1.26
SYNE2-213ENST00000554805 TGFAP01135 160 aa7.17□□□□□ -1.26
SYNE2-213ENST00000554805 RNASE3P12724 160 aaKnown RBP7.17□□□□□ -1.26
SYNE2-213ENST00000554805 Q6ZS46 218 aa7.17□□□□□ -1.26
SYNE2-213ENST00000554805 MAPK1IP1LQ8NDC0 245 aa7.17□□□□□ -1.26
SYNE2-213ENST00000554805 ZNF418Q8TF45 676 aaPredicted RBP7.17□□□□□ -1.26
SYNE2-213ENST00000554805 LINC01600Q96MT4 127 aa7.17□□□□□ -1.26
SYNE2-213ENST00000554805 DAZ1Q9NQZ3 744 aaKnown RBP7.17□□□□□ -1.26
SYNE2-213ENST00000554805 C11orf86A6NJI1 115 aa7.16□□□□□ -1.26
SYNE2-213ENST00000554805 HTN1P15515 57 aa7.16□□□□□ -1.26
SYNE2-213ENST00000554805 EDN2P20800 178 aa7.16□□□□□ -1.26
SYNE2-213ENST00000554805 TRAV12-2A0A075B6T6 113 aa7.16□□□□□ -1.26
SYNE2-213ENST00000554805 SCGB1C2P0DMR2 95 aa7.16□□□□□ -1.26
SYNE2-213ENST00000554805 AZU1P20160 251 aa7.16□□□□□ -1.26
SYNE2-213ENST00000554805 ATP5J2P56134 94 aa7.16□□□□□ -1.26
SYNE2-213ENST00000554805 BBC3Q96PG8 261 aaPredicted RBP7.16□□□□□ -1.26
SYNE2-213ENST00000554805 SPANXB1Q9NS25 103 aaPredicted RBP7.16□□□□□ -1.26
SYNE2-213ENST00000554805 VCYO14598 125 aa7.15□□□□□ -1.26
SYNE2-213ENST00000554805 KLK9Q2XQG4 91 aa7.15□□□□□ -1.26
SYNE2-213ENST00000554805 SUMO4Q6EEV6 95 aa7.15□□□□□ -1.26
SYNE2-213ENST00000554805 KLK9Q9UKQ9 250 aa7.15□□□□□ -1.26
SYNE2-213ENST00000554805 NF1P21359 2839 aa7.15□□□□□ -1.26
SYNE2-213ENST00000554805 SDHAF1A6NFY7 115 aa7.15□□□□□ -1.26
SYNE2-213ENST00000554805 SOCS3O14543 225 aa7.15□□□□□ -1.26
SYNE2-213ENST00000554805 GAGE12HA6NDE8 117 aa7.15□□□□□ -1.27
SYNE2-213ENST00000554805 ZFP2Q6ZN57 461 aa7.15□□□□□ -1.27
SYNE2-213ENST00000554805 ATP6V0BQ99437 205 aa7.15□□□□□ -1.27
SYNE2-213ENST00000554805 CCL19Q99731 98 aa7.15□□□□□ -1.27
SYNE2-213ENST00000554805 PRRC2AP48634 2157 aaKnown RBP7.15□□□□□ -1.27
SYNE2-213ENST00000554805 FBN2P35556 2912 aa7.14□□□□□ -1.27
SYNE2-213ENST00000554805 IGHV3-64A0A075B6Q5 118 aa7.14□□□□□ -1.27
SYNE2-213ENST00000554805 PMVKQ15126 192 aa7.14□□□□□ -1.27
SYNE2-213ENST00000554805 HIST2H2BCQ6DN03 193 aa7.14□□□□□ -1.27
SYNE2-213ENST00000554805 SPAG8Q99932 426 aaPredicted RBP7.14□□□□□ -1.27
SYNE2-213ENST00000554805 IGHG2P01859 326 aa7.14□□□□□ -1.27
SYNE2-213ENST00000554805 LGALS3P17931 250 aaKnown RBP7.14□□□□□ -1.27
SYNE2-213ENST00000554805 H7C2G1 150 aa7.14□□□□□ -1.27
SYNE2-213ENST00000554805 PAPPA-AS1Q5QFB9 102 aa7.14□□□□□ -1.27
SYNE2-213ENST00000554805 MED14OSP0DP75 135 aa7.13□□□□□ -1.27
SYNE2-213ENST00000554805 DLX4Q92988 240 aaPredicted RBP7.13□□□□□ -1.27
SYNE2-213ENST00000554805 INSL3P51460 131 aa7.13□□□□□ -1.27
SYNE2-213ENST00000554805 SYT8Q8NBV8 401 aa7.13□□□□□ -1.27
SYNE2-213ENST00000554805 HIVEP2P31629 2446 aa7.13□□□□□ -1.27
SYNE2-213ENST00000554805 A6NDX4 124 aa7.13□□□□□ -1.27
SYNE2-213ENST00000554805 C19orf54Q5BKX5 351 aa7.13□□□□□ -1.27
SYNE2-213ENST00000554805 MORN3Q6PF18 240 aaPredicted RBP7.13□□□□□ -1.27
SYNE2-213ENST00000554805 DUX5Q96PT3 197 aa7.13□□□□□ -1.27
SYNE2-213ENST00000554805 OPRPNQ99935 248 aaPredicted RBP7.13□□□□□ -1.27
SYNE2-213ENST00000554805 SPINK13Q1W4C9 94 aa7.12□□□□□ -1.27
SYNE2-213ENST00000554805 MDFICQ9P1T7 246 aa7.12□□□□□ -1.27
SYNE2-213ENST00000554805 RNF223E7ERA6 249 aa7.12□□□□□ -1.27
SYNE2-213ENST00000554805 H3BUA1 57 aa7.12□□□□□ -1.27
SYNE2-213ENST00000554805 SNRPD3P62318 126 aaKnown RBP7.12□□□□□ -1.27
SYNE2-213ENST00000554805 IGHV4-30-2A0A087WSY4 118 aa7.11□□□□□ -1.27
SYNE2-213ENST00000554805 CRIP2P52943 208 aaPredicted RBP7.11□□□□□ -1.27
SYNE2-213ENST00000554805 LYRM7Q5U5X0 104 aa7.11□□□□□ -1.27
SYNE2-213ENST00000554805 IGHV3-73A0A0B4J1V6 119 aa7.11□□□□□ -1.27
SYNE2-213ENST00000554805 CRYGDP07320 174 aa7.11□□□□□ -1.27
SYNE2-213ENST00000554805 TMEM141Q96I45 108 aa7.11□□□□□ -1.27
SYNE2-213ENST00000554805 TEX15Q9BXT5 2789 aa7.11□□□□□ -1.27
SYNE2-213ENST00000554805 TSPAN13O95857 204 aa7.11□□□□□ -1.27
SYNE2-213ENST00000554805 TSHBP01222 138 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms