RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 TDRG1Q3Y452 100 aa2.83□□□□□ -1.96
VTI1B-203ENST00000554636 FAM74A1Q5RGS3 127 aa2.83□□□□□ -1.96
VTI1B-203ENST00000554636 ADAMTSL4-AS1Q5T5F5 129 aa2.83□□□□□ -1.96
VTI1B-203ENST00000554636 C1orf134Q5TEV5 83 aa2.83□□□□□ -1.96
VTI1B-203ENST00000554636 TMEM183AQ8IXX5 376 aa2.83□□□□□ -1.96
VTI1B-203ENST00000554636 C6orf223Q8N319 242 aa2.83□□□□□ -1.96
VTI1B-203ENST00000554636 TMEM75Q8N9X5 138 aa2.83□□□□□ -1.96
VTI1B-203ENST00000554636 C5orf17Q8NAS9 161 aa2.83□□□□□ -1.96
VTI1B-203ENST00000554636 OR2T35Q8NGX2 323 aa2.83□□□□□ -1.96
VTI1B-203ENST00000554636 SGK494Q96LW2 274 aa2.83□□□□□ -1.96
VTI1B-203ENST00000554636 ACTR3CQ9C0K3 210 aaPredicted RBP2.83□□□□□ -1.96
VTI1B-203ENST00000554636 TREM1Q9NP99 234 aa2.83□□□□□ -1.96
VTI1B-203ENST00000554636 CYTL1Q9NRR1 136 aa2.83□□□□□ -1.96
VTI1B-203ENST00000554636 TMEM167BQ9NRX6 74 aa2.83□□□□□ -1.96
VTI1B-203ENST00000554636 NAGKQ9UJ70 344 aa2.83□□□□□ -1.96
VTI1B-203ENST00000554636 BORCS7-ASMTA0A0B4J1R7 106 aa2.82□□□□□ -1.96
VTI1B-203ENST00000554636 TRAV4A0A0B4J268 109 aa2.82□□□□□ -1.96
VTI1B-203ENST00000554636 CTXND1A0A1B0GTU2 59 aa2.82□□□□□ -1.96
VTI1B-203ENST00000554636 M0R2P5 195 aa2.82□□□□□ -1.96
VTI1B-203ENST00000554636 ARPC5O15511 151 aa2.82□□□□□ -1.96
VTI1B-203ENST00000554636 GNRH2O43555 120 aa2.82□□□□□ -1.96
VTI1B-203ENST00000554636 CXorf1O96002 111 aa2.82□□□□□ -1.96
VTI1B-203ENST00000554636 SFTA3P0C7M3 94 aa2.82□□□□□ -1.96
VTI1B-203ENST00000554636 CAMPP49913 170 aa2.82□□□□□ -1.96
VTI1B-203ENST00000554636 FGF8P55075 233 aaPredicted RBP2.82□□□□□ -1.96
VTI1B-203ENST00000554636 TTC32Q5I0X7 151 aa2.82□□□□□ -1.96
VTI1B-203ENST00000554636 SOHLH1Q5JUK2 328 aa2.82□□□□□ -1.96
VTI1B-203ENST00000554636 FAM159AQ6UWV7 190 aa2.82□□□□□ -1.96
VTI1B-203ENST00000554636 Q6ZRN7 208 aaPredicted RBP2.82□□□□□ -1.96
VTI1B-203ENST00000554636 IQCF2Q8IXL9 164 aa2.82□□□□□ -1.96
VTI1B-203ENST00000554636 CYB561D1Q8N8Q1 229 aa2.82□□□□□ -1.96
VTI1B-203ENST00000554636 INO80EQ8NBZ0 244 aaPredicted RBP2.82□□□□□ -1.96
VTI1B-203ENST00000554636 RASL10AQ92737 203 aa2.82□□□□□ -1.96
VTI1B-203ENST00000554636 C9orf85Q96MD7 179 aa2.82□□□□□ -1.96
VTI1B-203ENST00000554636 SPXQ9BT56 116 aa2.82□□□□□ -1.96
VTI1B-203ENST00000554636 Q9H8V8 135 aa2.82□□□□□ -1.96
VTI1B-203ENST00000554636 PRO0255Q9UI72 69 aa2.82□□□□□ -1.96
VTI1B-203ENST00000554636 EPDR1Q9UM22 224 aa2.82□□□□□ -1.96
VTI1B-203ENST00000554636 PSG8Q9UQ74 426 aa2.82□□□□□ -1.96
VTI1B-203ENST00000554636 ICOSQ9Y6W8 199 aa2.82□□□□□ -1.96
VTI1B-203ENST00000554636 IGLV9-49A0A0B4J1Y8 123 aa2.81□□□□□ -1.96
VTI1B-203ENST00000554636 TRAV34A0A0B4J273 112 aa2.81□□□□□ -1.96
VTI1B-203ENST00000554636 LOC100131303A0A0U1RQF7 123 aa2.81□□□□□ -1.96
VTI1B-203ENST00000554636 A0A1W2PPQ1 181 aa2.81□□□□□ -1.96
VTI1B-203ENST00000554636 A0A1W2PRE2 83 aa2.81□□□□□ -1.96
VTI1B-203ENST00000554636 MAP1LC3B2A6NCE7 125 aa2.81□□□□□ -1.96
VTI1B-203ENST00000554636 FAM74A7A6NL05 159 aa2.81□□□□□ -1.96
VTI1B-203ENST00000554636 H7C423 109 aa2.81□□□□□ -1.96
VTI1B-203ENST00000554636 K7EQD1 137 aa2.81□□□□□ -1.96
VTI1B-203ENST00000554636 PEX7O00628 323 aa2.81□□□□□ -1.96
VTI1B-203ENST00000554636 RS1O15537 224 aa2.81□□□□□ -1.96
VTI1B-203ENST00000554636 NXPH4O95158 308 aa2.81□□□□□ -1.96
VTI1B-203ENST00000554636 GCGP01275 180 aa2.81□□□□□ -1.96
VTI1B-203ENST00000554636 PFN1P07737 140 aaKnown RBP2.81□□□□□ -1.96
VTI1B-203ENST00000554636 GATA1P15976 413 aaPredicted RBP2.81□□□□□ -1.96
VTI1B-203ENST00000554636 LINC00315P59091 139 aa2.81□□□□□ -1.96
VTI1B-203ENST00000554636 UBE2G2P60604 165 aa2.81□□□□□ -1.96
VTI1B-203ENST00000554636 SNRPEP62304 92 aaKnown RBP2.81□□□□□ -1.96
VTI1B-203ENST00000554636 FLI1Q01543 452 aaPredicted RBP2.81□□□□□ -1.96
VTI1B-203ENST00000554636 SLAQ13239 276 aa2.81□□□□□ -1.96
VTI1B-203ENST00000554636 ZNF345Q14585 488 aa2.81□□□□□ -1.96
VTI1B-203ENST00000554636 AKR1C8PQ5T2L2 129 aa2.81□□□□□ -1.96
VTI1B-203ENST00000554636 LYPD5Q6UWN5 251 aa2.81□□□□□ -1.96
VTI1B-203ENST00000554636 DPPA3Q6W0C5 159 aa2.81□□□□□ -1.96
VTI1B-203ENST00000554636 PRNTQ86SH4 94 aa2.81□□□□□ -1.96
VTI1B-203ENST00000554636 Q86TA4 180 aa2.81□□□□□ -1.96
VTI1B-203ENST00000554636 KCNRGQ8N5I3 272 aa2.81□□□□□ -1.96
VTI1B-203ENST00000554636 OR11H4Q8NGC9 324 aa2.81□□□□□ -1.96
VTI1B-203ENST00000554636 NDFIP1Q9BT67 221 aa2.81□□□□□ -1.96
VTI1B-203ENST00000554636 MAP1LC3BQ9GZQ8 125 aa2.81□□□□□ -1.96
VTI1B-203ENST00000554636 HHLA3Q9XRX5 114 aa2.81□□□□□ -1.96
VTI1B-203ENST00000554636 MYCBP2O75592 4640 aa2.8□□□□□ -1.96
VTI1B-203ENST00000554636 PKHD1L1Q86WI1 4243 aa2.8□□□□□ -1.96
VTI1B-203ENST00000554636 TRGV4A0A0C4DH28 118 aa2.8□□□□□ -1.96
VTI1B-203ENST00000554636 TRBV6-1A0A0K0K1D8 114 aa2.8□□□□□ -1.96
VTI1B-203ENST00000554636 FBLL1A6NHQ2 334 aaKnown RBP2.8□□□□□ -1.96
VTI1B-203ENST00000554636 HMSDA8MTL9 139 aa2.8□□□□□ -1.96
VTI1B-203ENST00000554636 K7EQM0 130 aa2.8□□□□□ -1.96
VTI1B-203ENST00000554636 TAAR5O14804 337 aa2.8□□□□□ -1.96
VTI1B-203ENST00000554636 SIVA1O15304 175 aa2.8□□□□□ -1.96
VTI1B-203ENST00000554636 LINC00694P0DN24 101 aa2.8□□□□□ -1.96
VTI1B-203ENST00000554636 RNASE3P12724 160 aaKnown RBP2.8□□□□□ -1.96
VTI1B-203ENST00000554636 FHITP49789 147 aa2.8□□□□□ -1.96
VTI1B-203ENST00000554636 CRIP1P50238 77 aa2.8□□□□□ -1.96
VTI1B-203ENST00000554636 MRPL23Q16540 153 aaKnown RBP2.8□□□□□ -1.96
VTI1B-203ENST00000554636 SMUG1Q53HV7 270 aa2.8□□□□□ -1.96
VTI1B-203ENST00000554636 COX8CQ7Z4L0 72 aa2.8□□□□□ -1.96
VTI1B-203ENST00000554636 WFDC10BQ8IUB3 73 aa2.8□□□□□ -1.96
VTI1B-203ENST00000554636 OR4C5Q8NGB2 326 aa2.8□□□□□ -1.96
VTI1B-203ENST00000554636 PTH2Q96A98 100 aa2.8□□□□□ -1.96
VTI1B-203ENST00000554636 ZC2HC1AQ96GY0 325 aa2.8□□□□□ -1.96
VTI1B-203ENST00000554636 KCNS1Q96KK3 526 aa2.8□□□□□ -1.96
VTI1B-203ENST00000554636 ARL2-SNX15V9GYD0 113 aa2.8□□□□□ -1.96
VTI1B-203ENST00000554636 IGHV3-73A0A0B4J1V6 119 aa2.79□□□□□ -1.96
VTI1B-203ENST00000554636 PGPEP1LA6NFU8 196 aa2.79□□□□□ -1.96
VTI1B-203ENST00000554636 C16orf90A8MZG2 172 aa2.79□□□□□ -1.96
VTI1B-203ENST00000554636 C9JCJ5 164 aa2.79□□□□□ -1.96
VTI1B-203ENST00000554636 BCL2L11O43521 198 aa2.79□□□□□ -1.96
VTI1B-203ENST00000554636 SH2D1AO60880 128 aa2.79□□□□□ -1.96
VTI1B-203ENST00000554636 IFNA7P01567 189 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms