RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 Q8N814 137 aa3.21□□□□□ -1.9
ATXN3-228ENST00000554592 OR10G4Q8NGN3 311 aa3.21□□□□□ -1.9
ATXN3-228ENST00000554592 SFT2D1Q8WV19 159 aa3.21□□□□□ -1.9
ATXN3-228ENST00000554592 TRGV9Q99603 122 aa3.21□□□□□ -1.9
ATXN3-228ENST00000554592 LINC00467Q9BRT7 94 aa3.21□□□□□ -1.9
ATXN3-228ENST00000554592 OR5AC2Q9NZP5 309 aa3.21□□□□□ -1.9
ATXN3-228ENST00000554592 DNAH8Q96JB1 4490 aa3.2□□□□□ -1.9
ATXN3-228ENST00000554592 TRAV1-1A0A0B4J248 108 aa3.2□□□□□ -1.9
ATXN3-228ENST00000554592 TRAV5A0A0B4J249 113 aa3.2□□□□□ -1.9
ATXN3-228ENST00000554592 IGHV3-16A0A0C4DH30 117 aa3.2□□□□□ -1.9
ATXN3-228ENST00000554592 KRTAP9-6A8MVA2 160 aa3.2□□□□□ -1.9
ATXN3-228ENST00000554592 CRYGDP07320 174 aa3.2□□□□□ -1.9
ATXN3-228ENST00000554592 RPL7P18124 248 aaKnown RBP3.2□□□□□ -1.9
ATXN3-228ENST00000554592 ORM2P19652 201 aa3.2□□□□□ -1.9
ATXN3-228ENST00000554592 S100PP25815 95 aa3.2□□□□□ -1.9
ATXN3-228ENST00000554592 KRTAP10-4P60372 401 aaPredicted RBP3.2□□□□□ -1.9
ATXN3-228ENST00000554592 GUK1Q16774 197 aa3.2□□□□□ -1.9
ATXN3-228ENST00000554592 Q6ZSA8 131 aa3.2□□□□□ -1.9
ATXN3-228ENST00000554592 NEGR1Q7Z3B1 354 aa3.2□□□□□ -1.9
ATXN3-228ENST00000554592 LYZL2Q7Z4W2 148 aa3.2□□□□□ -1.9
ATXN3-228ENST00000554592 STX12Q86Y82 276 aa3.2□□□□□ -1.9
ATXN3-228ENST00000554592 SELENOHQ8IZQ5 122 aaKnown RBP3.2□□□□□ -1.9
ATXN3-228ENST00000554592 C12orf57Q99622 126 aa3.2□□□□□ -1.9
ATXN3-228ENST00000554592 PYGO2Q9BRQ0 406 aa3.2□□□□□ -1.9
ATXN3-228ENST00000554592 TMEM147Q9BVK8 224 aa3.2□□□□□ -1.9
ATXN3-228ENST00000554592 PARD6GQ9BYG4 376 aaPredicted RBP3.2□□□□□ -1.9
ATXN3-228ENST00000554592 TMEM242Q9NWH2 141 aa3.2□□□□□ -1.9
ATXN3-228ENST00000554592 PRO0255Q9UI72 69 aa3.2□□□□□ -1.9
ATXN3-228ENST00000554592 HHLA3Q9XRX5 114 aa3.2□□□□□ -1.9
ATXN3-228ENST00000554592 RCL1Q9Y2P8 373 aaKnown RBP3.2□□□□□ -1.9
ATXN3-228ENST00000554592 TRGV1A0A0A0MS02 117 aa3.19□□□□□ -1.9
ATXN3-228ENST00000554592 C7orf77A4D0Y5 90 aa3.19□□□□□ -1.9
ATXN3-228ENST00000554592 SSSCA1O60232 199 aa3.19□□□□□ -1.9
ATXN3-228ENST00000554592 PITX3O75364 302 aa3.19□□□□□ -1.9
ATXN3-228ENST00000554592 CRYBA4P53673 196 aa3.19□□□□□ -1.9
ATXN3-228ENST00000554592 TAS2R30P59541 319 aa3.19□□□□□ -1.9
ATXN3-228ENST00000554592 RAB11AP62491 216 aa3.19□□□□□ -1.9
ATXN3-228ENST00000554592 HBG1P69891 147 aa3.19□□□□□ -1.9
ATXN3-228ENST00000554592 HBG2P69892 147 aa3.19□□□□□ -1.9
ATXN3-228ENST00000554592 ACOT6Q3I5F7 207 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-228ENST00000554592 TDRG1Q3Y452 100 aa3.19□□□□□ -1.9
ATXN3-228ENST00000554592 KHDC3LQ587J8 217 aa3.19□□□□□ -1.9
ATXN3-228ENST00000554592 KRTAP5-4Q6L8H1 288 aa3.19□□□□□ -1.9
ATXN3-228ENST00000554592 DTD1Q8TEA8 209 aa3.19□□□□□ -1.9
ATXN3-228ENST00000554592 HIST1H2BAQ96A08 127 aa3.19□□□□□ -1.9
ATXN3-228ENST00000554592 RPUSD4Q96CM3 377 aaKnown RBP3.19□□□□□ -1.9
ATXN3-228ENST00000554592 BTF3L4Q96K17 158 aa3.19□□□□□ -1.9
ATXN3-228ENST00000554592 CIB3Q96Q77 187 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-228ENST00000554592 MRPL32Q9BYC8 188 aaKnown RBP3.19□□□□□ -1.9
ATXN3-228ENST00000554592 KRTAP4-4Q9BYR3 166 aa3.19□□□□□ -1.9
ATXN3-228ENST00000554592 OR51M1Q9H341 326 aa3.19□□□□□ -1.9
ATXN3-228ENST00000554592 C11orf1Q9H5F2 150 aa3.19□□□□□ -1.9
ATXN3-228ENST00000554592 RPS10P5Q9NQ39 176 aa3.19□□□□□ -1.9
ATXN3-228ENST00000554592 LYRM2Q9NU23 88 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-228ENST00000554592 FUT9Q9Y231 359 aa3.19□□□□□ -1.9
ATXN3-228ENST00000554592 FAT3Q8TDW7 4589 aa3.19□□□□□ -1.9
ATXN3-228ENST00000554592 IGKV1OR2-108A0A075B7D4 117 aa3.18□□□□□ -1.9
ATXN3-228ENST00000554592 TRAV12-3A0A0B4J271 114 aa3.18□□□□□ -1.9
ATXN3-228ENST00000554592 RBFOX3A6NFN3 312 aa3.18□□□□□ -1.9
ATXN3-228ENST00000554592 IBA57-AS1B1ANH7 110 aa3.18□□□□□ -1.9
ATXN3-228ENST00000554592 RS1O15537 224 aa3.18□□□□□ -1.9
ATXN3-228ENST00000554592 GATCO43716 136 aaKnown RBP3.18□□□□□ -1.9
ATXN3-228ENST00000554592 SYNGR2O43760 224 aa3.18□□□□□ -1.9
ATXN3-228ENST00000554592 SPINK4O60575 86 aa3.18□□□□□ -1.9
ATXN3-228ENST00000554592 RAB5AP20339 215 aa3.18□□□□□ -1.9
ATXN3-228ENST00000554592 SRIP30626 198 aa3.18□□□□□ -1.9
ATXN3-228ENST00000554592 LEPP41159 167 aa3.18□□□□□ -1.9
ATXN3-228ENST00000554592 AKR1D1P51857 326 aa3.18□□□□□ -1.9
ATXN3-228ENST00000554592 POLR2GP62487 172 aaKnown RBP eCLIP3.18□□□□□ -1.9
ATXN3-228ENST00000554592 SERF2P84101 59 aa3.18□□□□□ -1.9
ATXN3-228ENST00000554592 ZNF506Q5JVG8 444 aa3.18□□□□□ -1.9
ATXN3-228ENST00000554592 REG3GQ6UW15 175 aa3.18□□□□□ -1.9
ATXN3-228ENST00000554592 SCXQ7RTU7 201 aa3.18□□□□□ -1.9
ATXN3-228ENST00000554592 S100A7AQ86SG5 101 aa3.18□□□□□ -1.9
ATXN3-228ENST00000554592 WFDC10BQ8IUB3 73 aa3.18□□□□□ -1.9
ATXN3-228ENST00000554592 CBLN2Q8IUK8 224 aa3.18□□□□□ -1.9
ATXN3-228ENST00000554592 PSMG3Q9BT73 122 aaPredicted RBP3.18□□□□□ -1.9
ATXN3-228ENST00000554592 SHANK2-AS3Q9BTD1 123 aa3.18□□□□□ -1.9
ATXN3-228ENST00000554592 CHAC1Q9BUX1 264 aa3.18□□□□□ -1.9
ATXN3-228ENST00000554592 EIF5A2Q9GZV4 153 aaKnown RBP3.18□□□□□ -1.9
ATXN3-228ENST00000554592 RBKSQ9H477 322 aa3.18□□□□□ -1.9
ATXN3-228ENST00000554592 RNF24Q9Y225 148 aa3.18□□□□□ -1.9
ATXN3-228ENST00000554592 IGSF23A1L1A6 192 aa3.17□□□□□ -1.9
ATXN3-228ENST00000554592 H3BRN7 92 aa3.17□□□□□ -1.9
ATXN3-228ENST00000554592 M0R036 132 aa3.17□□□□□ -1.9
ATXN3-228ENST00000554592 HYPMO75409 117 aa3.17□□□□□ -1.9
ATXN3-228ENST00000554592 EIF3GO75821 320 aaKnown RBP eCLIP3.17□□□□□ -1.9
ATXN3-228ENST00000554592 IFNA1P01562 189 aa3.17□□□□□ -1.9
ATXN3-228ENST00000554592 IGHV3-53P01767 116 aa3.17□□□□□ -1.9
ATXN3-228ENST00000554592 MBP02144 154 aa3.17□□□□□ -1.9
ATXN3-228ENST00000554592 ORM1P02763 201 aa3.17□□□□□ -1.9
ATXN3-228ENST00000554592 CT45A10P0DMU9 189 aa3.17□□□□□ -1.9
ATXN3-228ENST00000554592 GATA2P23769 480 aaPredicted RBP3.17□□□□□ -1.9
ATXN3-228ENST00000554592 KRTAP5-9P26371 169 aa3.17□□□□□ -1.9
ATXN3-228ENST00000554592 ASIPP42127 132 aa3.17□□□□□ -1.9
ATXN3-228ENST00000554592 RPL35P42766 123 aaKnown RBP3.17□□□□□ -1.9
ATXN3-228ENST00000554592 SULT1A1P50225 295 aa3.17□□□□□ -1.9
ATXN3-228ENST00000554592 PPT1P50897 306 aa3.17□□□□□ -1.9
ATXN3-228ENST00000554592 AKR1C1Q04828 323 aa3.17□□□□□ -1.9
ATXN3-228ENST00000554592 ATP6V1FQ16864 119 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms