RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 RS1O15537 224 aa10.35□□□□□ -0.75
SHMT2-210ENST00000553950 SCO1O75880 301 aa10.35□□□□□ -0.75
SHMT2-210ENST00000553950 RAB4BP61018 213 aa10.35□□□□□ -0.75
SHMT2-210ENST00000553950 FBN3Q75N90 2809 aa10.34□□□□□ -0.75
SHMT2-210ENST00000553950 DEFB130BP0DP73 79 aa10.34□□□□□ -0.75
SHMT2-210ENST00000553950 DEFB130AP0DP74 79 aa10.34□□□□□ -0.75
SHMT2-210ENST00000553950 SSTP61278 116 aa10.34□□□□□ -0.75
SHMT2-210ENST00000553950 U3KQK5 164 aa10.34□□□□□ -0.75
SHMT2-210ENST00000553950 H7C1H1 209 aa10.33□□□□□ -0.76
SHMT2-210ENST00000553950 ATP5G1P05496 136 aa10.33□□□□□ -0.76
SHMT2-210ENST00000553950 SLAQ13239 276 aa10.33□□□□□ -0.76
SHMT2-210ENST00000553950 ZNF56Q15929 161 aa10.33□□□□□ -0.76
SHMT2-210ENST00000553950 FAM74A4Q5TZK3 123 aa10.33□□□□□ -0.76
SHMT2-210ENST00000553950 CFAP126Q5VTH2 177 aa10.33□□□□□ -0.76
SHMT2-210ENST00000553950 C14orf178Q8N769 122 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-210ENST00000553950 C11orf45Q8TAV5 145 aa10.33□□□□□ -0.76
SHMT2-210ENST00000553950 MSRB1Q9NZV6 116 aa10.33□□□□□ -0.76
SHMT2-210ENST00000553950 MGPP08493 103 aa10.32□□□□□ -0.76
SHMT2-210ENST00000553950 EVI2AP22794 236 aa10.32□□□□□ -0.76
SHMT2-210ENST00000553950 TMEM136Q6ZRR5 245 aa10.32□□□□□ -0.76
SHMT2-210ENST00000553950 MRAP2Q96G30 205 aa10.32□□□□□ -0.76
SHMT2-210ENST00000553950 CELA1Q9UNI1 258 aa10.32□□□□□ -0.76
SHMT2-210ENST00000553950 A0A087WWL8 130 aa10.31□□□□□ -0.76
SHMT2-210ENST00000553950 PPP1R17O96001 155 aa10.31□□□□□ -0.76
SHMT2-210ENST00000553950 PPBPP02775 128 aa10.31□□□□□ -0.76
SHMT2-210ENST00000553950 RAB5AP20339 215 aa10.31□□□□□ -0.76
SHMT2-210ENST00000553950 FAM104BQ5XKR9 115 aa10.31□□□□□ -0.76
SHMT2-210ENST00000553950 TRGV4A0A0C4DH28 118 aa10.3□□□□□ -0.76
SHMT2-210ENST00000553950 COLCA2A8K830 154 aa10.3□□□□□ -0.76
SHMT2-210ENST00000553950 CRYGDP07320 174 aa10.3□□□□□ -0.76
SHMT2-210ENST00000553950 POM121L12Q8N7R1 296 aa10.3□□□□□ -0.76
SHMT2-210ENST00000553950 EDA2RQ9HAV5 297 aa10.3□□□□□ -0.76
SHMT2-210ENST00000553950 TRAPPC1Q9Y5R8 145 aa10.3□□□□□ -0.76
SHMT2-210ENST00000553950 KIF25-AS1Q9Y6Z4 181 aa10.3□□□□□ -0.76
SHMT2-210ENST00000553950 NBEAL2Q6ZNJ1 2754 aa10.29□□□□□ -0.76
SHMT2-210ENST00000553950 F5H697 171 aa10.29□□□□□ -0.76
SHMT2-210ENST00000553950 APCSP02743 223 aa10.29□□□□□ -0.76
SHMT2-210ENST00000553950 RPS10P46783 165 aaKnown RBP10.29□□□□□ -0.76
SHMT2-210ENST00000553950 UFSP1Q6NVU6 142 aa10.29□□□□□ -0.76
SHMT2-210ENST00000553950 AMN1Q8IY45 258 aa10.29□□□□□ -0.76
SHMT2-210ENST00000553950 MRPL18Q9H0U6 180 aaKnown RBP10.29□□□□□ -0.76
SHMT2-210ENST00000553950 JPT2Q9H910 190 aa10.29□□□□□ -0.76
SHMT2-210ENST00000553950 LAMTOR2Q9Y2Q5 125 aa10.29□□□□□ -0.76
SHMT2-210ENST00000553950 MEGF8Q7Z7M0 2845 aa10.28□□□□□ -0.76
SHMT2-210ENST00000553950 PRKDCP78527 4128 aaKnown RBP10.28□□□□□ -0.76
SHMT2-210ENST00000553950 TRBV10-1A0A0K0K1A3 114 aa10.28□□□□□ -0.76
SHMT2-210ENST00000553950 TRBV6-4A0A1B0GX49 114 aa10.28□□□□□ -0.76
SHMT2-210ENST00000553950 IGHV3-53P01767 116 aa10.28□□□□□ -0.76
SHMT2-210ENST00000553950 RHOHQ15669 191 aa10.28□□□□□ -0.76
SHMT2-210ENST00000553950 C12orf74Q32Q52 190 aa10.28□□□□□ -0.76
SHMT2-210ENST00000553950 ORMDL3Q8N138 153 aa10.28□□□□□ -0.76
SHMT2-210ENST00000553950 ZNF479Q96JC4 524 aa10.28□□□□□ -0.76
SHMT2-210ENST00000553950 SAMD10Q9BYL1 202 aa10.28□□□□□ -0.76
SHMT2-210ENST00000553950 TENM3Q9P273 2699 aa10.27□□□□□ -0.77
SHMT2-210ENST00000553950 K7EQD1 137 aa10.27□□□□□ -0.77
SHMT2-210ENST00000553950 GATA1P15976 413 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-210ENST00000553950 RAB4AP20338 218 aa10.27□□□□□ -0.77
SHMT2-210ENST00000553950 PRADC1Q9BSG0 188 aa10.27□□□□□ -0.77
SHMT2-210ENST00000553950 PRO0255Q9UI72 69 aa10.27□□□□□ -0.77
SHMT2-210ENST00000553950 HUWE1Q7Z6Z7 4374 aaKnown RBP10.27□□□□□ -0.77
SHMT2-210ENST00000553950 TRAV10A0A0B4J240 114 aa10.26□□□□□ -0.77
SHMT2-210ENST00000553950 PHOX2AO14813 284 aa10.26□□□□□ -0.77
SHMT2-210ENST00000553950 CKS2P33552 79 aa10.26□□□□□ -0.77
SHMT2-210ENST00000553950 LINC00315P59091 139 aa10.26□□□□□ -0.77
SHMT2-210ENST00000553950 FABP9Q0Z7S8 132 aa10.26□□□□□ -0.77
SHMT2-210ENST00000553950 MRPL51Q4U2R6 128 aaKnown RBP10.26□□□□□ -0.77
SHMT2-210ENST00000553950 SUMO4Q6EEV6 95 aa10.26□□□□□ -0.77
SHMT2-210ENST00000553950 Q6ZTC4 211 aa10.26□□□□□ -0.77
SHMT2-210ENST00000553950 RNF185Q96GF1 192 aa10.26□□□□□ -0.77
SHMT2-210ENST00000553950 DNAH9Q9NYC9 4486 aa10.26□□□□□ -0.77
SHMT2-210ENST00000553950 IGHV3-73A0A0B4J1V6 119 aa10.25□□□□□ -0.77
SHMT2-210ENST00000553950 F5H768 121 aa10.25□□□□□ -0.77
SHMT2-210ENST00000553950 NANOS2P60321 138 aaKnown RBP10.25□□□□□ -0.77
SHMT2-210ENST00000553950 FHL2Q14192 279 aa10.25□□□□□ -0.77
SHMT2-210ENST00000553950 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.25□□□□□ -0.77
SHMT2-210ENST00000553950 DNAJC30Q96LL9 226 aa10.25□□□□□ -0.77
SHMT2-210ENST00000553950 D6R8Y8 96 aa10.24□□□□□ -0.77
SHMT2-210ENST00000553950 H3BNG1 76 aa10.24□□□□□ -0.77
SHMT2-210ENST00000553950 HTN3P15516 51 aa10.24□□□□□ -0.77
SHMT2-210ENST00000553950 OR10J3Q5JRS4 329 aa10.24□□□□□ -0.77
SHMT2-210ENST00000553950 HHLA3Q9XRX5 114 aa10.24□□□□□ -0.77
SHMT2-210ENST00000553950 DEFB131BA0A096LNP1 70 aa10.23□□□□□ -0.77
SHMT2-210ENST00000553950 M0QY20 66 aa10.23□□□□□ -0.77
SHMT2-210ENST00000553950 CRYBA4P53673 196 aa10.23□□□□□ -0.77
SHMT2-210ENST00000553950 RPL36AP83881 106 aaKnown RBP10.23□□□□□ -0.77
SHMT2-210ENST00000553950 RPL36ALQ969Q0 106 aaKnown RBP10.23□□□□□ -0.77
SHMT2-210ENST00000553950 PRELID3AQ96N28 172 aa10.23□□□□□ -0.77
SHMT2-210ENST00000553950 NIT2Q9NQR4 276 aa10.23□□□□□ -0.77
SHMT2-210ENST00000553950 PAX4O43316 350 aa10.22□□□□□ -0.77
SHMT2-210ENST00000553950 SH2D6Q7Z4S9 175 aa10.22□□□□□ -0.77
SHMT2-210ENST00000553950 SLC25A29Q8N8R3 303 aa10.22□□□□□ -0.77
SHMT2-210ENST00000553950 C20orf78Q9BR46 151 aa10.22□□□□□ -0.77
SHMT2-210ENST00000553950 MAP1LC3AQ9H492 121 aa10.22□□□□□ -0.77
SHMT2-210ENST00000553950 TNFRSF18Q9Y5U5 241 aa10.22□□□□□ -0.77
SHMT2-210ENST00000553950 TRAV26-2A0A0B4J265 109 aa10.21□□□□□ -0.77
SHMT2-210ENST00000553950 TRBV6-5A0A0K0K1A5 114 aa10.21□□□□□ -0.77
SHMT2-210ENST00000553950 NUPR2A6NF83 97 aa10.21□□□□□ -0.77
SHMT2-210ENST00000553950 C1orf196B1AJZ1 125 aa10.21□□□□□ -0.77
SHMT2-210ENST00000553950 NCR2O95944 276 aa10.21□□□□□ -0.77
SHMT2-210ENST00000553950 TRGC2P03986 189 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms