RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 TP73-AS1Q9UF72 201 aa10.34□□□□□ -0.75
RAB3IP-216ENST00000552199 ANK3Q12955 4377 aaKnown RBP10.33□□□□□ -0.76
RAB3IP-216ENST00000552199 TRGV11A0A075B6L2 103 aa10.33□□□□□ -0.76
RAB3IP-216ENST00000552199 RBMY1BA6NDE4 496 aaKnown RBP10.33□□□□□ -0.76
RAB3IP-216ENST00000552199 RBMY1EA6NEQ0 496 aaKnown RBP10.33□□□□□ -0.76
RAB3IP-216ENST00000552199 NUDT3O95989 172 aa10.33□□□□□ -0.76
RAB3IP-216ENST00000552199 RBMY1DP0C7P1 496 aaKnown RBP10.33□□□□□ -0.76
RAB3IP-216ENST00000552199 RBMY1A1P0DJD3 496 aaKnown RBP10.33□□□□□ -0.76
RAB3IP-216ENST00000552199 RBMY1CP0DJD4 496 aa10.33□□□□□ -0.76
RAB3IP-216ENST00000552199 COX8AP10176 69 aa10.33□□□□□ -0.76
RAB3IP-216ENST00000552199 RBMY1FQ15415 496 aaKnown RBP10.33□□□□□ -0.76
RAB3IP-216ENST00000552199 ANKRD39Q53RE8 183 aa10.33□□□□□ -0.76
RAB3IP-216ENST00000552199 ZMAT4Q9H898 229 aa10.33□□□□□ -0.76
RAB3IP-216ENST00000552199 TMEM160Q9NX00 188 aa10.33□□□□□ -0.76
RAB3IP-216ENST00000552199 TSSC4Q9Y5U2 329 aaPredicted RBP10.33□□□□□ -0.76
RAB3IP-216ENST00000552199 ACANP16112 2415 aa10.33□□□□□ -0.76
RAB3IP-216ENST00000552199 A0A087WWL8 130 aa10.33□□□□□ -0.76
RAB3IP-216ENST00000552199 TRAV25A0A0B4J276 109 aa10.33□□□□□ -0.76
RAB3IP-216ENST00000552199 COL5A1-AS1Q5SY13 56 aa10.33□□□□□ -0.76
RAB3IP-216ENST00000552199 SUMO4Q6EEV6 95 aa10.33□□□□□ -0.76
RAB3IP-216ENST00000552199 ZNF418Q8TF45 676 aaPredicted RBP10.33□□□□□ -0.76
RAB3IP-216ENST00000552199 SPAG8Q99932 426 aaPredicted RBP10.33□□□□□ -0.76
RAB3IP-216ENST00000552199 CITED2Q99967 270 aaPredicted RBP10.33□□□□□ -0.76
RAB3IP-216ENST00000552199 ZNF256Q9Y2P7 627 aaPredicted RBP10.33□□□□□ -0.76
RAB3IP-216ENST00000552199 RPL32P62910 135 aaKnown RBP10.32□□□□□ -0.76
RAB3IP-216ENST00000552199 STPG4Q8N801 248 aa10.32□□□□□ -0.76
RAB3IP-216ENST00000552199 CBY3A6NI87 242 aa10.31□□□□□ -0.76
RAB3IP-216ENST00000552199 HINT1P49773 126 aaPredicted RBP10.31□□□□□ -0.76
RAB3IP-216ENST00000552199 HILS1P60008 231 aa10.31□□□□□ -0.76
RAB3IP-216ENST00000552199 TOMM6Q96B49 74 aa10.31□□□□□ -0.76
RAB3IP-216ENST00000552199 CSTL1Q9H114 145 aa10.31□□□□□ -0.76
RAB3IP-216ENST00000552199 NF1P21359 2839 aa10.31□□□□□ -0.76
RAB3IP-216ENST00000552199 F5H697 171 aa10.31□□□□□ -0.76
RAB3IP-216ENST00000552199 CRYGDP07320 174 aa10.31□□□□□ -0.76
RAB3IP-216ENST00000552199 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.29□□□□□ -0.76
RAB3IP-216ENST00000552199 POLR2KP53803 58 aaKnown RBP10.29□□□□□ -0.76
RAB3IP-216ENST00000552199 ZNF876PQ49A33 203 aa10.29□□□□□ -0.76
RAB3IP-216ENST00000552199 SMR3AQ99954 134 aa10.29□□□□□ -0.76
RAB3IP-216ENST00000552199 ZMAT5Q9UDW3 170 aaKnown RBP10.29□□□□□ -0.76
RAB3IP-216ENST00000552199 IGKCP01834 107 aa10.29□□□□□ -0.76
RAB3IP-216ENST00000552199 FGF6P10767 208 aa10.29□□□□□ -0.76
RAB3IP-216ENST00000552199 FAM74A4Q5TZK3 123 aa10.29□□□□□ -0.76
RAB3IP-216ENST00000552199 CLUHP3Q96NS8 147 aa10.29□□□□□ -0.76
RAB3IP-216ENST00000552199 SCGB3A1Q96QR1 104 aa10.29□□□□□ -0.76
RAB3IP-216ENST00000552199 TRBV6-5A0A0K0K1A5 114 aa10.28□□□□□ -0.76
RAB3IP-216ENST00000552199 DPM2O94777 84 aa10.28□□□□□ -0.76
RAB3IP-216ENST00000552199 NDUFA7O95182 113 aa10.28□□□□□ -0.76
RAB3IP-216ENST00000552199 HHLA3Q9XRX5 114 aa10.28□□□□□ -0.76
RAB3IP-216ENST00000552199 A0A087WX48 190 aa10.27□□□□□ -0.76
RAB3IP-216ENST00000552199 VCYO14598 125 aa10.27□□□□□ -0.76
RAB3IP-216ENST00000552199 HTN1P15515 57 aa10.27□□□□□ -0.76
RAB3IP-216ENST00000552199 ZNF56Q15929 161 aa10.27□□□□□ -0.76
RAB3IP-216ENST00000552199 ODF3L2Q3SX64 289 aa10.27□□□□□ -0.76
RAB3IP-216ENST00000552199 C2orf66Q6UXQ4 117 aa10.27□□□□□ -0.76
RAB3IP-216ENST00000552199 C2orf91Q6ZV80 131 aa10.27□□□□□ -0.76
RAB3IP-216ENST00000552199 NEGR1Q7Z3B1 354 aa10.27□□□□□ -0.76
RAB3IP-216ENST00000552199 CUBNO60494 3623 aa10.27□□□□□ -0.77
RAB3IP-216ENST00000552199 TRAV12-1A0A0B4J245 112 aa10.27□□□□□ -0.77
RAB3IP-216ENST00000552199 M0QY20 66 aa10.27□□□□□ -0.77
RAB3IP-216ENST00000552199 MPV17L2Q567V2 206 aa10.27□□□□□ -0.77
RAB3IP-216ENST00000552199 BOD1L2Q8IYS8 172 aa10.27□□□□□ -0.77
RAB3IP-216ENST00000552199 LINC00469Q8N7U9 141 aa10.27□□□□□ -0.77
RAB3IP-216ENST00000552199 LINC00467Q9BRT7 94 aa10.27□□□□□ -0.77
RAB3IP-216ENST00000552199 MRPL35Q9NZE8 188 aaKnown RBP10.27□□□□□ -0.77
RAB3IP-216ENST00000552199 NOTCH2Q04721 2471 aa10.26□□□□□ -0.77
RAB3IP-216ENST00000552199 TCTAP57738 103 aa10.26□□□□□ -0.77
RAB3IP-216ENST00000552199 MORN3Q6PF18 240 aaPredicted RBP10.26□□□□□ -0.77
RAB3IP-216ENST00000552199 SDHAF1A6NFY7 115 aa10.25□□□□□ -0.77
RAB3IP-216ENST00000552199 DLEU1O43261 78 aa10.25□□□□□ -0.77
RAB3IP-216ENST00000552199 LY6G6DO95868 133 aa10.25□□□□□ -0.77
RAB3IP-216ENST00000552199 G0S2P27469 103 aa10.25□□□□□ -0.77
RAB3IP-216ENST00000552199 FLNBO75369 2602 aaKnown RBP10.25□□□□□ -0.77
RAB3IP-216ENST00000552199 TRBV27A0A0K0K1C4 114 aa10.25□□□□□ -0.77
RAB3IP-216ENST00000552199 H7C1H1 209 aa10.25□□□□□ -0.77
RAB3IP-216ENST00000552199 INSP01308 110 aa10.25□□□□□ -0.77
RAB3IP-216ENST00000552199 PRM2P04554 102 aa10.25□□□□□ -0.77
RAB3IP-216ENST00000552199 PROK1P58294 105 aa10.25□□□□□ -0.77
RAB3IP-216ENST00000552199 ZNF415Q09FC8 603 aa10.25□□□□□ -0.77
RAB3IP-216ENST00000552199 C12orf54Q6X4T0 127 aa10.25□□□□□ -0.77
RAB3IP-216ENST00000552199 ZFP2Q6ZN57 461 aa10.25□□□□□ -0.77
RAB3IP-216ENST00000552199 ERASQ7Z444 233 aa10.25□□□□□ -0.77
RAB3IP-216ENST00000552199 TRPT1Q86TN4 253 aaKnown RBP10.25□□□□□ -0.77
RAB3IP-216ENST00000552199 JMJD8Q96S16 334 aa10.25□□□□□ -0.77
RAB3IP-216ENST00000552199 LINC01587Q99440 93 aa10.25□□□□□ -0.77
RAB3IP-216ENST00000552199 KIR2DL4Q99706 377 aa10.25□□□□□ -0.77
RAB3IP-216ENST00000552199 WNK1Q9H4A3 2382 aa10.24□□□□□ -0.77
RAB3IP-216ENST00000552199 MTORP42345 2549 aa10.24□□□□□ -0.77
RAB3IP-216ENST00000552199 ADARB2-AS1A8MUL3 147 aa10.24□□□□□ -0.77
RAB3IP-216ENST00000552199 OR11H12B2RN74 326 aa10.24□□□□□ -0.77
RAB3IP-216ENST00000552199 NMUP48645 174 aa10.24□□□□□ -0.77
RAB3IP-216ENST00000552199 BVES-AS1Q5T3Y7 98 aa10.24□□□□□ -0.77
RAB3IP-216ENST00000552199 NEXN-AS1Q8NBZ9 246 aa10.24□□□□□ -0.77
RAB3IP-216ENST00000552199 PTH2Q96A98 100 aa10.24□□□□□ -0.77
RAB3IP-216ENST00000552199 CYSLTR1Q9Y271 337 aa10.24□□□□□ -0.77
RAB3IP-216ENST00000552199 LINC01549A6NIU2 74 aa10.23□□□□□ -0.77
RAB3IP-216ENST00000552199 M0R2P5 195 aa10.23□□□□□ -0.77
RAB3IP-216ENST00000552199 ZNF25P17030 456 aaPredicted RBP10.23□□□□□ -0.77
RAB3IP-216ENST00000552199 PIK3CD-AS1Q5SR53 167 aa10.23□□□□□ -0.77
RAB3IP-216ENST00000552199 PCP2Q8IVA1 136 aa10.23□□□□□ -0.77
RAB3IP-216ENST00000552199 STHQ8IWL8 128 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms