RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 S100A10P60903 97 aa8.85□□□□□ -0.99
VPS29-209ENST00000551655 RBX1P62877 108 aa8.85□□□□□ -0.99
VPS29-209ENST00000551655 HBG1P69891 147 aa8.85□□□□□ -0.99
VPS29-209ENST00000551655 HBG2P69892 147 aa8.85□□□□□ -0.99
VPS29-209ENST00000551655 RPL36AP83881 106 aaKnown RBP8.85□□□□□ -0.99
VPS29-209ENST00000551655 PRR26Q8N8Z3 221 aa8.85□□□□□ -0.99
VPS29-209ENST00000551655 RPL36ALQ969Q0 106 aaKnown RBP8.85□□□□□ -0.99
VPS29-209ENST00000551655 H3BVH4 76 aa8.84□□□□□ -0.99
VPS29-209ENST00000551655 RHODO00212 210 aa8.84□□□□□ -0.99
VPS29-209ENST00000551655 NDUFB6O95139 128 aa8.84□□□□□ -0.99
VPS29-209ENST00000551655 GAGE6Q13070 117 aa8.84□□□□□ -0.99
VPS29-209ENST00000551655 STX12Q86Y82 276 aa8.84□□□□□ -0.99
VPS29-209ENST00000551655 NDFIP1Q9BT67 221 aa8.84□□□□□ -0.99
VPS29-209ENST00000551655 MBD2Q9UBB5 411 aa8.84□□□□□ -0.99
VPS29-209ENST00000551655 TRBV7-3A0A075B6L6 115 aa8.83□□□□□ -1
VPS29-209ENST00000551655 A0A096LNI7 61 aa8.83□□□□□ -1
VPS29-209ENST00000551655 NDUFS6O75380 124 aaKnown RBP8.83□□□□□ -1
VPS29-209ENST00000551655 ATP6V1FQ16864 119 aa8.83□□□□□ -1
VPS29-209ENST00000551655 PIK3CD-AS1Q5SR53 167 aa8.83□□□□□ -1
VPS29-209ENST00000551655 Q6ZRP5 223 aa8.83□□□□□ -1
VPS29-209ENST00000551655 MITD1Q8WV92 249 aa8.83□□□□□ -1
VPS29-209ENST00000551655 OR5AC2Q9NZP5 309 aa8.83□□□□□ -1
VPS29-209ENST00000551655 TRAV26-2A0A0B4J265 109 aa8.82□□□□□ -1
VPS29-209ENST00000551655 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.82□□□□□ -1
VPS29-209ENST00000551655 NHLH2Q02577 135 aa8.82□□□□□ -1
VPS29-209ENST00000551655 NTM-AS1Q6ZSK4 140 aa8.82□□□□□ -1
VPS29-209ENST00000551655 V9GYH0 126 aa8.82□□□□□ -1
VPS29-209ENST00000551655 REG3AQ06141 175 aa8.81□□□□□ -1
VPS29-209ENST00000551655 KHDC3LQ587J8 217 aa8.81□□□□□ -1
VPS29-209ENST00000551655 FAM74A1Q5RGS3 127 aa8.81□□□□□ -1
VPS29-209ENST00000551655 C15orf56Q8N910 161 aa8.81□□□□□ -1
VPS29-209ENST00000551655 GFRA4Q9GZZ7 299 aa8.81□□□□□ -1
VPS29-209ENST00000551655 PSG8Q9UQ74 426 aa8.81□□□□□ -1
VPS29-209ENST00000551655 TRBV10-1A0A0K0K1A3 114 aa8.8□□□□□ -1
VPS29-209ENST00000551655 A6NJY4 79 aa8.8□□□□□ -1
VPS29-209ENST00000551655 PVALBP20472 110 aaPredicted RBP8.8□□□□□ -1
VPS29-209ENST00000551655 CACNG7P62955 275 aa8.8□□□□□ -1
VPS29-209ENST00000551655 RAB32Q13637 225 aa8.8□□□□□ -1
VPS29-209ENST00000551655 HIGD2BQ4VC39 106 aa8.8□□□□□ -1
VPS29-209ENST00000551655 SMUG1Q53HV7 270 aa8.8□□□□□ -1
VPS29-209ENST00000551655 NEXN-AS1Q8NBZ9 246 aa8.8□□□□□ -1
VPS29-209ENST00000551655 OR5C1Q8NGR4 320 aa8.8□□□□□ -1
VPS29-209ENST00000551655 SFRP2Q96HF1 295 aa8.8□□□□□ -1
VPS29-209ENST00000551655 IL36BQ9NZH7 164 aa8.8□□□□□ -1
VPS29-209ENST00000551655 PSORS1C2Q9UIG4 136 aa8.8□□□□□ -1
VPS29-209ENST00000551655 IFNA7P01567 189 aa8.79□□□□□ -1
VPS29-209ENST00000551655 RPS10P46783 165 aaKnown RBP8.79□□□□□ -1
VPS29-209ENST00000551655 PRNTQ86SH4 94 aa8.79□□□□□ -1
VPS29-209ENST00000551655 ZNF664Q8N3J9 261 aa8.79□□□□□ -1
VPS29-209ENST00000551655 WDR61Q9GZS3 305 aaKnown RBP8.79□□□□□ -1
VPS29-209ENST00000551655 GRIFINA4D1Z8 144 aa8.78□□□□□ -1
VPS29-209ENST00000551655 M0R381 172 aa8.78□□□□□ -1
VPS29-209ENST00000551655 ARMS2P0C7Q2 107 aa8.78□□□□□ -1
VPS29-209ENST00000551655 ZFP69Q49AA0 526 aa8.78□□□□□ -1
VPS29-209ENST00000551655 OR11H4Q8NGC9 324 aa8.78□□□□□ -1
VPS29-209ENST00000551655 OR10G8Q8NGN5 311 aa8.78□□□□□ -1
VPS29-209ENST00000551655 TCRAP04437 139 aa8.77□□□□□ -1.01
VPS29-209ENST00000551655 BTCP35070 178 aa8.77□□□□□ -1.01
VPS29-209ENST00000551655 C20orf203Q8NBC4 194 aa8.77□□□□□ -1.01
VPS29-209ENST00000551655 DEDD2Q8WXF8 326 aa8.77□□□□□ -1.01
VPS29-209ENST00000551655 M0R036 132 aa8.76□□□□□ -1.01
VPS29-209ENST00000551655 HMGB3O15347 200 aaKnown RBP8.76□□□□□ -1.01
VPS29-209ENST00000551655 TAS2R45P59539 299 aa8.76□□□□□ -1.01
VPS29-209ENST00000551655 PKIAP61925 76 aa8.76□□□□□ -1.01
VPS29-209ENST00000551655 FLI1Q01543 452 aaPredicted RBP8.76□□□□□ -1.01
VPS29-209ENST00000551655 ARL6IP6Q8N6S5 226 aa8.76□□□□□ -1.01
VPS29-209ENST00000551655 KCNIP2Q9NS61 270 aa8.76□□□□□ -1.01
VPS29-209ENST00000551655 B4DEV8 164 aa8.75□□□□□ -1.01
VPS29-209ENST00000551655 IL15RAQ13261 267 aa8.75□□□□□ -1.01
VPS29-209ENST00000551655 INO80EQ8NBZ0 244 aaPredicted RBP8.75□□□□□ -1.01
VPS29-209ENST00000551655 MUC17Q685J3 4493 aa8.74□□□□□ -1.01
VPS29-209ENST00000551655 IGLV4-60A0A075B6I1 120 aa8.74□□□□□ -1.01
VPS29-209ENST00000551655 H3BMQ9 156 aa8.74□□□□□ -1.01
VPS29-209ENST00000551655 SEC22CQ9BRL7 303 aa8.74□□□□□ -1.01
VPS29-209ENST00000551655 DERL1Q9BUN8 251 aa8.74□□□□□ -1.01
VPS29-209ENST00000551655 TRAV8-4A0A0B4J246 113 aa8.73□□□□□ -1.01
VPS29-209ENST00000551655 C17orf112F2Z3M2 114 aa8.73□□□□□ -1.01
VPS29-209ENST00000551655 P01737 135 aa8.73□□□□□ -1.01
VPS29-209ENST00000551655 ZNF56Q15929 161 aa8.73□□□□□ -1.01
VPS29-209ENST00000551655 PHLDA3Q9Y5J5 127 aa8.73□□□□□ -1.01
VPS29-209ENST00000551655 TRAV34A0A0B4J273 112 aa8.72□□□□□ -1.01
VPS29-209ENST00000551655 GAGE12HA6NDE8 117 aa8.72□□□□□ -1.01
VPS29-209ENST00000551655 KRBOX1C9JBD0 128 aa8.72□□□□□ -1.01
VPS29-209ENST00000551655 PRR27Q6MZM9 219 aa8.72□□□□□ -1.01
VPS29-209ENST00000551655 C5orf17Q8NAS9 161 aa8.72□□□□□ -1.01
VPS29-209ENST00000551655 TRBV25-1A0A075B6N4 114 aa8.71□□□□□ -1.02
VPS29-209ENST00000551655 TMSB15BA0A087X1C1 80 aa8.71□□□□□ -1.02
VPS29-209ENST00000551655 TRBV6-1A0A0K0K1D8 114 aa8.71□□□□□ -1.02
VPS29-209ENST00000551655 SERTM2A0A1B0GWG4 89 aa8.71□□□□□ -1.02
VPS29-209ENST00000551655 NAP1L6A6NFF2 107 aa8.71□□□□□ -1.02
VPS29-209ENST00000551655 FABP5P3A8MUU1 101 aa8.71□□□□□ -1.02
VPS29-209ENST00000551655 MRPS26Q9BYN8 205 aaKnown RBP8.71□□□□□ -1.02
VPS29-209ENST00000551655 K7EQM0 130 aa8.7□□□□□ -1.02
VPS29-209ENST00000551655 TPT1P13693 172 aaKnown RBP8.7□□□□□ -1.02
VPS29-209ENST00000551655 CRIP1P50238 77 aa8.7□□□□□ -1.02
VPS29-209ENST00000551655 RAB4BP61018 213 aa8.7□□□□□ -1.02
VPS29-209ENST00000551655 DNLZQ5SXM8 178 aa8.7□□□□□ -1.02
VPS29-209ENST00000551655 PQLC2Q6ZP29 291 aa8.7□□□□□ -1.02
VPS29-209ENST00000551655 LINC00526Q96FQ7 95 aa8.7□□□□□ -1.02
VPS29-209ENST00000551655 ARL2-SNX15V9GYD0 113 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms