RNA–Protein interactions for RNA: ENST00000551604.2

CUX2-203, Transcript of cut like homeobox 2, humanhuman

TSL 5

Gene CUX2, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-203ENST00000551604 CCSMST1Q4G0I0 132 aa2.26□□□□□ -2.05
CUX2-203ENST00000551604 TOMM20LQ6UXN7 152 aa2.26□□□□□ -2.05
CUX2-203ENST00000551604 SOSTDC1Q6X4U4 206 aa2.26□□□□□ -2.05
CUX2-203ENST00000551604 OR10K1Q8NGX5 313 aa2.26□□□□□ -2.05
CUX2-203ENST00000551604 SKA2Q8WVK7 121 aaPredicted RBP2.26□□□□□ -2.05
CUX2-203ENST00000551604 LAMTOR2Q9Y2Q5 125 aa2.26□□□□□ -2.05
CUX2-203ENST00000551604 NUBP2Q9Y5Y2 271 aa2.26□□□□□ -2.05
CUX2-203ENST00000551604 MED12Q93074 2177 aa2.26□□□□□ -2.05
CUX2-203ENST00000551604 FAM107AO95990 144 aa2.25□□□□□ -2.05
CUX2-203ENST00000551604 IFNA4P05014 189 aa2.25□□□□□ -2.05
CUX2-203ENST00000551604 ZNF705BP0CI00 300 aaPredicted RBP2.25□□□□□ -2.05
CUX2-203ENST00000551604 BRS3P32247 399 aa2.25□□□□□ -2.05
CUX2-203ENST00000551604 RTL8BQ17RB0 113 aa2.25□□□□□ -2.05
CUX2-203ENST00000551604 C1orf140Q5VVS0 124 aa2.25□□□□□ -2.05
CUX2-203ENST00000551604 ANGPTL5Q86XS5 388 aa2.25□□□□□ -2.05
CUX2-203ENST00000551604 LINC00311Q8N616 119 aa2.25□□□□□ -2.05
CUX2-203ENST00000551604 LCN9Q8WX39 176 aa2.25□□□□□ -2.05
CUX2-203ENST00000551604 PYDC1Q8WXC3 89 aa2.25□□□□□ -2.05
CUX2-203ENST00000551604 Q96M85 177 aa2.25□□□□□ -2.05
CUX2-203ENST00000551604 ABCA4P78363 2273 aa2.25□□□□□ -2.05
CUX2-203ENST00000551604 SVEP1Q4LDE5 3571 aa2.25□□□□□ -2.05
CUX2-203ENST00000551604 KIAA1549Q9HCM3 1950 aa2.25□□□□□ -2.05
CUX2-203ENST00000551604 TRBV6-5A0A0K0K1A5 114 aa2.24□□□□□ -2.05
CUX2-203ENST00000551604 A0A1W2PRE2 83 aa2.24□□□□□ -2.05
CUX2-203ENST00000551604 APOC4-APOC2K7ER74 178 aa2.24□□□□□ -2.05
CUX2-203ENST00000551604 GADD45GO95257 159 aa2.24□□□□□ -2.05
CUX2-203ENST00000551604 APOC2P02655 101 aa2.24□□□□□ -2.05
CUX2-203ENST00000551604 STATHP02808 62 aa2.24□□□□□ -2.05
CUX2-203ENST00000551604 KRTAP6-3Q3LI67 103 aa2.24□□□□□ -2.05
CUX2-203ENST00000551604 KRTAP13-4Q3LI77 160 aa2.24□□□□□ -2.05
CUX2-203ENST00000551604 RNASE10Q5GAN6 216 aaKnown RBP2.24□□□□□ -2.05
CUX2-203ENST00000551604 Q6ZRN7 208 aaPredicted RBP2.24□□□□□ -2.05
CUX2-203ENST00000551604 C1orf54Q8WWF1 131 aa2.24□□□□□ -2.05
CUX2-203ENST00000551604 PSMF1Q92530 271 aa2.24□□□□□ -2.05
CUX2-203ENST00000551604 ZNF714Q96N38 554 aa2.24□□□□□ -2.05
CUX2-203ENST00000551604 OR52A1Q9UKL2 312 aa2.24□□□□□ -2.05
CUX2-203ENST00000551604 HSPB11Q9Y547 144 aa2.24□□□□□ -2.05
CUX2-203ENST00000551604 LY96Q9Y6Y9 160 aa2.24□□□□□ -2.05
CUX2-203ENST00000551604 DMBT1Q9UGM3 2413 aaPredicted RBP2.24□□□□□ -2.05
CUX2-203ENST00000551604 TRAV3A0A0B4J244 114 aa2.23□□□□□ -2.05
CUX2-203ENST00000551604 H0YGG7 62 aa2.23□□□□□ -2.05
CUX2-203ENST00000551604 CST7O76096 145 aa2.23□□□□□ -2.05
CUX2-203ENST00000551604 RPL22P35268 128 aaKnown RBP2.23□□□□□ -2.05
CUX2-203ENST00000551604 SSR2P43308 183 aa2.23□□□□□ -2.05
CUX2-203ENST00000551604 INSL3P51460 131 aa2.23□□□□□ -2.05
CUX2-203ENST00000551604 DCDP81605 110 aaKnown RBP2.23□□□□□ -2.05
CUX2-203ENST00000551604 PCOTHQ58A44 107 aa2.23□□□□□ -2.05
CUX2-203ENST00000551604 SAMD13Q5VXD3 122 aa2.23□□□□□ -2.05
CUX2-203ENST00000551604 Q6ZS92 163 aa2.23□□□□□ -2.05
CUX2-203ENST00000551604 C3orf56Q8N813 242 aa2.23□□□□□ -2.05
CUX2-203ENST00000551604 GRPEL2Q8TAA5 225 aa2.23□□□□□ -2.05
CUX2-203ENST00000551604 SFT2D1Q8WV19 159 aa2.23□□□□□ -2.05
CUX2-203ENST00000551604 NAA38Q9BRA0 125 aaKnown RBP2.23□□□□□ -2.05
CUX2-203ENST00000551604 EFCAB11Q9BUY7 163 aa2.23□□□□□ -2.05
CUX2-203ENST00000551604 SPANXA1Q9NS26 97 aa2.23□□□□□ -2.05
CUX2-203ENST00000551604 NDUFAF1Q9Y375 327 aa2.23□□□□□ -2.05
CUX2-203ENST00000551604 ACANP16112 2415 aa2.23□□□□□ -2.05
CUX2-203ENST00000551604 STAB2Q8WWQ8 2551 aa2.23□□□□□ -2.05
CUX2-203ENST00000551604 MED12LQ86YW9 2145 aa2.23□□□□□ -2.05
CUX2-203ENST00000551604 MAP1AP78559 2803 aaPredicted RBP2.22□□□□□ -2.05
CUX2-203ENST00000551604 HIST1H2BKO60814 126 aa2.22□□□□□ -2.05
CUX2-203ENST00000551604 HIST1H2BJP06899 126 aa2.22□□□□□ -2.05
CUX2-203ENST00000551604 TMBIM6P55061 237 aa2.22□□□□□ -2.05
CUX2-203ENST00000551604 TMEM128Q5BJH2 165 aa2.22□□□□□ -2.05
CUX2-203ENST00000551604 KRTAP13-1Q8IUC0 172 aa2.22□□□□□ -2.05
CUX2-203ENST00000551604 OR5D16Q8NGK9 328 aa2.22□□□□□ -2.05
CUX2-203ENST00000551604 BORCS8Q96FH0 119 aa2.22□□□□□ -2.05
CUX2-203ENST00000551604 VPS13CQ709C8 3753 aa2.22□□□□□ -2.05
CUX2-203ENST00000551604 ALPK2Q86TB3 2170 aa2.22□□□□□ -2.05
CUX2-203ENST00000551604 TRAV12-1A0A0B4J245 112 aa2.21□□□□□ -2.06
CUX2-203ENST00000551604 C17orf112F2Z3M2 114 aa2.21□□□□□ -2.06
CUX2-203ENST00000551604 OR10J4P0C629 311 aa2.21□□□□□ -2.06
CUX2-203ENST00000551604 BTG2P78543 158 aa2.21□□□□□ -2.06
CUX2-203ENST00000551604 ST6GALNAC3Q8NDV1 305 aa2.21□□□□□ -2.06
CUX2-203ENST00000551604 OR9Q1Q8NGQ5 310 aa2.21□□□□□ -2.06
CUX2-203ENST00000551604 OR2T35Q8NGX2 323 aa2.21□□□□□ -2.06
CUX2-203ENST00000551604 TMEM254Q8TBM7 123 aa2.21□□□□□ -2.06
CUX2-203ENST00000551604 C4orf3Q8WVX3 66 aa2.21□□□□□ -2.06
CUX2-203ENST00000551604 OR2H1Q9GZK4 316 aa2.21□□□□□ -2.06
CUX2-203ENST00000551604 CACYBPQ9HB71 228 aaKnown RBP2.21□□□□□ -2.06
CUX2-203ENST00000551604 ROS1P08922 2347 aa2.2□□□□□ -2.06
CUX2-203ENST00000551604 FREM1Q5H8C1 2179 aa2.2□□□□□ -2.06
CUX2-203ENST00000551604 EXPH5Q8NEV8 1989 aa2.2□□□□□ -2.06
CUX2-203ENST00000551604 TACC2O95359 2948 aa2.2□□□□□ -2.06
CUX2-203ENST00000551604 C2orf70A6NJV1 201 aa2.2□□□□□ -2.06
CUX2-203ENST00000551604 MIF4GDA9UHW6 222 aaKnown RBP2.2□□□□□ -2.06
CUX2-203ENST00000551604 LYZL6O75951 148 aa2.2□□□□□ -2.06
CUX2-203ENST00000551604 DHFRP00374 187 aa2.2□□□□□ -2.06
CUX2-203ENST00000551604 BCL2P10415 239 aa2.2□□□□□ -2.06
CUX2-203ENST00000551604 RPS3P23396 243 aaKnown RBP eCLIP2.2□□□□□ -2.06
CUX2-203ENST00000551604 CMPK1P30085 196 aa2.2□□□□□ -2.06
CUX2-203ENST00000551604 RPL35P42766 123 aaKnown RBP2.2□□□□□ -2.06
CUX2-203ENST00000551604 RAB4BP61018 213 aa2.2□□□□□ -2.06
CUX2-203ENST00000551604 PDE6HQ13956 83 aa2.2□□□□□ -2.06
CUX2-203ENST00000551604 PRR15Q8IV56 129 aa2.2□□□□□ -2.06
CUX2-203ENST00000551604 OR4K15Q8NH41 348 aa2.2□□□□□ -2.06
CUX2-203ENST00000551604 ZNF418Q8TF45 676 aaPredicted RBP2.2□□□□□ -2.06
CUX2-203ENST00000551604 TSLPQ969D9 159 aa2.2□□□□□ -2.06
CUX2-203ENST00000551604 ZNF625Q96I27 306 aaPredicted RBP2.2□□□□□ -2.06
CUX2-203ENST00000551604 C19orf12Q9NSK7 152 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms