RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 C3orf56Q8N813 242 aa9.24□□□□□ -0.93
ERBB3-219ENST00000551242 TMEM263Q8WUH6 116 aaKnown RBP9.24□□□□□ -0.93
ERBB3-219ENST00000551242 CCDC140Q96MF4 163 aa9.24□□□□□ -0.93
ERBB3-219ENST00000551242 FAM110AQ9BQ89 295 aa9.24□□□□□ -0.93
ERBB3-219ENST00000551242 CENPVL3A0A0U1RRI6 287 aa9.23□□□□□ -0.93
ERBB3-219ENST00000551242 MUSTN1Q8IVN3 82 aa9.23□□□□□ -0.93
ERBB3-219ENST00000551242 OPRPNQ99935 248 aaPredicted RBP9.23□□□□□ -0.93
ERBB3-219ENST00000551242 JPT2Q9H910 190 aa9.23□□□□□ -0.93
ERBB3-219ENST00000551242 PTPRQQ9UMZ3 2332 aa9.23□□□□□ -0.93
ERBB3-219ENST00000551242 TRAV8-4A0A0B4J246 113 aa9.23□□□□□ -0.93
ERBB3-219ENST00000551242 LINC01620Q4KN68 170 aa9.23□□□□□ -0.93
ERBB3-219ENST00000551242 ZFAND2AQ8N6M9 145 aa9.23□□□□□ -0.93
ERBB3-219ENST00000551242 COL12A1Q99715 3063 aa9.22□□□□□ -0.93
ERBB3-219ENST00000551242 G3V318 75 aa9.22□□□□□ -0.93
ERBB3-219ENST00000551242 PAPPA-AS1Q5QFB9 102 aa9.22□□□□□ -0.93
ERBB3-219ENST00000551242 RNASE4P34096 147 aaKnown RBP9.22□□□□□ -0.93
ERBB3-219ENST00000551242 LY6G5BQ8NDX9 201 aa9.22□□□□□ -0.93
ERBB3-219ENST00000551242 METTL26Q96S19 204 aa9.22□□□□□ -0.93
ERBB3-219ENST00000551242 AKAP6Q13023 2319 aa9.21□□□□□ -0.93
ERBB3-219ENST00000551242 COL6A6A6NMZ7 2263 aa9.21□□□□□ -0.93
ERBB3-219ENST00000551242 CELSR1Q9NYQ6 3014 aa9.21□□□□□ -0.94
ERBB3-219ENST00000551242 ODF3BA8MYP8 253 aa9.21□□□□□ -0.94
ERBB3-219ENST00000551242 FOXC1Q12948 553 aa9.21□□□□□ -0.94
ERBB3-219ENST00000551242 ZNF580Q9UK33 172 aa9.21□□□□□ -0.94
ERBB3-219ENST00000551242 A0A087WWL8 130 aa9.2□□□□□ -0.94
ERBB3-219ENST00000551242 TRAV21A0A0B4J279 112 aa9.2□□□□□ -0.94
ERBB3-219ENST00000551242 F6UB75 175 aa9.2□□□□□ -0.94
ERBB3-219ENST00000551242 ATP6V0E1O15342 81 aa9.2□□□□□ -0.94
ERBB3-219ENST00000551242 RNASE3P12724 160 aaKnown RBP9.2□□□□□ -0.94
ERBB3-219ENST00000551242 ATXN8Q156A1 80 aa9.2□□□□□ -0.94
ERBB3-219ENST00000551242 VMO1Q7Z5L0 202 aa9.2□□□□□ -0.94
ERBB3-219ENST00000551242 Q8N6K4 173 aa9.2□□□□□ -0.94
ERBB3-219ENST00000551242 B9A039 149 aa9.2□□□□□ -0.94
ERBB3-219ENST00000551242 ZNF876PQ49A33 203 aa9.2□□□□□ -0.94
ERBB3-219ENST00000551242 MEIG1Q5JSS6 88 aa9.2□□□□□ -0.94
ERBB3-219ENST00000551242 Q8N9W7 124 aa9.2□□□□□ -0.94
ERBB3-219ENST00000551242 MRPL53Q96EL3 112 aaKnown RBP9.2□□□□□ -0.94
ERBB3-219ENST00000551242 MAP1AP78559 2803 aaPredicted RBP9.2□□□□□ -0.94
ERBB3-219ENST00000551242 IGHV1-69DA0A0B4J2H0 117 aa9.19□□□□□ -0.94
ERBB3-219ENST00000551242 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.19□□□□□ -0.94
ERBB3-219ENST00000551242 ADARB2-AS1A8MUL3 147 aa9.19□□□□□ -0.94
ERBB3-219ENST00000551242 F5H697 171 aa9.19□□□□□ -0.94
ERBB3-219ENST00000551242 M0QXV9 152 aa9.19□□□□□ -0.94
ERBB3-219ENST00000551242 IGFL3Q6UXB1 125 aa9.19□□□□□ -0.94
ERBB3-219ENST00000551242 TRIAP1O43715 76 aa9.19□□□□□ -0.94
ERBB3-219ENST00000551242 P0DMU3 169 aa9.19□□□□□ -0.94
ERBB3-219ENST00000551242 FAM231AP0DMU4 169 aa9.19□□□□□ -0.94
ERBB3-219ENST00000551242 FAM231CP0DMU5 169 aa9.19□□□□□ -0.94
ERBB3-219ENST00000551242 LINC00315P59091 139 aa9.19□□□□□ -0.94
ERBB3-219ENST00000551242 IGKV3-7A0A075B6H7 116 aa9.18□□□□□ -0.94
ERBB3-219ENST00000551242 H3BMM0 161 aa9.18□□□□□ -0.94
ERBB3-219ENST00000551242 BRI3O95415 125 aa9.18□□□□□ -0.94
ERBB3-219ENST00000551242 Q6Q795 121 aa9.18□□□□□ -0.94
ERBB3-219ENST00000551242 FAM110DQ8TAY7 271 aaPredicted RBP9.18□□□□□ -0.94
ERBB3-219ENST00000551242 UBE2WQ96B02 151 aa9.18□□□□□ -0.94
ERBB3-219ENST00000551242 ZNF256Q9Y2P7 627 aaPredicted RBP9.18□□□□□ -0.94
ERBB3-219ENST00000551242 A0A0B4J2C4 111 aa9.18□□□□□ -0.94
ERBB3-219ENST00000551242 POLR2KP53803 58 aaKnown RBP9.18□□□□□ -0.94
ERBB3-219ENST00000551242 SUMO4Q6EEV6 95 aa9.18□□□□□ -0.94
ERBB3-219ENST00000551242 CHCHD5Q9BSY4 110 aa9.18□□□□□ -0.94
ERBB3-219ENST00000551242 TRBV10-2A0A0K0K1G8 114 aa9.18□□□□□ -0.94
ERBB3-219ENST00000551242 SDHAF1A6NFY7 115 aa9.18□□□□□ -0.94
ERBB3-219ENST00000551242 C2orf82Q6UX34 121 aa9.18□□□□□ -0.94
ERBB3-219ENST00000551242 ITLN2Q8WWU7 325 aaPredicted RBP9.18□□□□□ -0.94
ERBB3-219ENST00000551242 TMEM141Q96I45 108 aa9.18□□□□□ -0.94
ERBB3-219ENST00000551242 KIF25-AS1Q9Y6Z4 181 aa9.18□□□□□ -0.94
ERBB3-219ENST00000551242 LGALS9O00182 355 aa9.17□□□□□ -0.94
ERBB3-219ENST00000551242 PPP1R17O96001 155 aa9.17□□□□□ -0.94
ERBB3-219ENST00000551242 RPL13AP40429 203 aaKnown RBP9.17□□□□□ -0.94
ERBB3-219ENST00000551242 ZNF56Q15929 161 aa9.17□□□□□ -0.94
ERBB3-219ENST00000551242 OR10J6PQ8NGY7 276 aa9.17□□□□□ -0.94
ERBB3-219ENST00000551242 TIMM17AQ99595 171 aa9.17□□□□□ -0.94
ERBB3-219ENST00000551242 CD3EP07766 207 aa9.17□□□□□ -0.94
ERBB3-219ENST00000551242 Q6ZSV7 163 aa9.17□□□□□ -0.94
ERBB3-219ENST00000551242 LINC01560Q8TB33 94 aa9.17□□□□□ -0.94
ERBB3-219ENST00000551242 DUX3Q96PT4 197 aa9.17□□□□□ -0.94
ERBB3-219ENST00000551242 TMEM223A0PJW6 202 aa9.16□□□□□ -0.94
ERBB3-219ENST00000551242 VCYO14598 125 aa9.16□□□□□ -0.94
ERBB3-219ENST00000551242 PRSS2P07478 247 aa9.16□□□□□ -0.94
ERBB3-219ENST00000551242 FAM74A4Q5TZK3 123 aa9.16□□□□□ -0.94
ERBB3-219ENST00000551242 LINC00477Q96M19 166 aa9.16□□□□□ -0.94
ERBB3-219ENST00000551242 RPL11P62913 178 aaKnown RBP9.16□□□□□ -0.94
ERBB3-219ENST00000551242 LINC00527Q9UJ94 153 aa9.16□□□□□ -0.94
ERBB3-219ENST00000551242 LENEPQ9Y5L5 61 aa9.16□□□□□ -0.94
ERBB3-219ENST00000551242 U3KQE9 123 aa9.16□□□□□ -0.94
ERBB3-219ENST00000551242 VPS13CQ709C8 3753 aa9.15□□□□□ -0.94
ERBB3-219ENST00000551242 CUBNO60494 3623 aa9.15□□□□□ -0.94
ERBB3-219ENST00000551242 SPTAN1Q13813 2472 aaKnown RBP9.15□□□□□ -0.94
ERBB3-219ENST00000551242 H7C423 109 aa9.15□□□□□ -0.94
ERBB3-219ENST00000551242 LEPROTO15243 131 aa9.15□□□□□ -0.94
ERBB3-219ENST00000551242 C9orf139Q6ZV77 190 aa9.15□□□□□ -0.94
ERBB3-219ENST00000551242 PRRC2AP48634 2157 aaKnown RBP9.15□□□□□ -0.94
ERBB3-219ENST00000551242 IGHV4OR15-8A0A075B7B6 117 aa9.15□□□□□ -0.95
ERBB3-219ENST00000551242 A0A087WW49 117 aa9.15□□□□□ -0.95
ERBB3-219ENST00000551242 NBL1P41271 181 aa9.15□□□□□ -0.95
ERBB3-219ENST00000551242 NPC2P61916 151 aa9.15□□□□□ -0.95
ERBB3-219ENST00000551242 CLEC2BQ92478 149 aa9.15□□□□□ -0.95
ERBB3-219ENST00000551242 EEF1AKMT3Q96AZ1 226 aa9.15□□□□□ -0.95
ERBB3-219ENST00000551242 A0A0J9YXV3 536 aa9.14□□□□□ -0.95
ERBB3-219ENST00000551242 ZNF22P17026 224 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms