RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 HIST1H3AP68431 136 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 AKR1C1Q04828 323 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 TMEM267Q0VDI3 215 aaPredicted RBP2.23□□□□□ -2.05
LIMA1-205ENST00000550592 OR8B8Q15620 311 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 KHDC3LQ587J8 217 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 TMEM97Q5BJF2 176 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 OR2T2Q6IF00 324 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 TOMM20LQ6UXN7 152 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 SLC35E3Q7Z769 313 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 C20orf196Q8IYI0 205 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 OR2T35Q8NGX2 323 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 C4orf3Q8WVX3 66 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 TMEM106AQ96A25 262 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 SMIM19Q96E16 107 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 DNAJC30Q96LL9 226 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 C20orf27Q9GZN8 174 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 LPAR5Q9H1C0 372 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 ATG5Q9H1Y0 275 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 BANF2Q9H503 90 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 HES4Q9HCC6 221 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 UQCC1Q9NVA1 299 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 FAM206AQ9NX38 181 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 FKBP11Q9NYL4 201 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 CCDC167Q9P0B6 97 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 MRPL27Q9P0M9 148 aaKnown RBP2.23□□□□□ -2.05
LIMA1-205ENST00000550592 KAAG1Q9UBP8 84 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 NAT8BQ9UHF3 227 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 ERG28Q9UKR5 140 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 LAMTOR2Q9Y2Q5 125 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 FAT1Q14517 4588 aa2.23□□□□□ -2.05
LIMA1-205ENST00000550592 KANTRA0A1W2PQU2 76 aa2.22□□□□□ -2.05
LIMA1-205ENST00000550592 C5orf49A4QMS7 147 aa2.22□□□□□ -2.05
LIMA1-205ENST00000550592 NDUFB3O43676 98 aa2.22□□□□□ -2.05
LIMA1-205ENST00000550592 OR7C1O76099 320 aaPredicted RBP2.22□□□□□ -2.05
LIMA1-205ENST00000550592 GYPAP02724 150 aa2.22□□□□□ -2.05
LIMA1-205ENST00000550592 SMR3BP02814 79 aaPredicted RBP2.22□□□□□ -2.05
LIMA1-205ENST00000550592 IFI6P09912 130 aa2.22□□□□□ -2.05
LIMA1-205ENST00000550592 NFYBP25208 207 aa2.22□□□□□ -2.05
LIMA1-205ENST00000550592 ATP6V0CP27449 155 aa2.22□□□□□ -2.05
LIMA1-205ENST00000550592 GRPRP30550 384 aa2.22□□□□□ -2.05
LIMA1-205ENST00000550592 HOXC5Q00444 222 aa2.22□□□□□ -2.05
LIMA1-205ENST00000550592 HIST1H1AQ02539 215 aaPredicted RBP2.22□□□□□ -2.05
LIMA1-205ENST00000550592 HSD52Q0P140 79 aa2.22□□□□□ -2.05
LIMA1-205ENST00000550592 HIST3H3Q16695 136 aa2.22□□□□□ -2.05
LIMA1-205ENST00000550592 SPANXN3Q5MJ09 141 aa2.22□□□□□ -2.05
LIMA1-205ENST00000550592 LELP1Q5T871 98 aa2.22□□□□□ -2.05
LIMA1-205ENST00000550592 GLT8D1Q68CQ7 371 aa2.22□□□□□ -2.05
LIMA1-205ENST00000550592 TCF23Q7RTU1 214 aa2.22□□□□□ -2.05
LIMA1-205ENST00000550592 COMMD6Q7Z4G1 85 aa2.22□□□□□ -2.05
LIMA1-205ENST00000550592 SLC22A24Q8N4F4 322 aa2.22□□□□□ -2.05
LIMA1-205ENST00000550592 OR52L1Q8NGH7 329 aa2.22□□□□□ -2.05
LIMA1-205ENST00000550592 OR5A1Q8NGJ0 315 aa2.22□□□□□ -2.05
LIMA1-205ENST00000550592 MFSD8Q8NHS3 518 aa2.22□□□□□ -2.05
LIMA1-205ENST00000550592 DIRAS2Q96HU8 199 aa2.22□□□□□ -2.05
LIMA1-205ENST00000550592 TEX37Q96LM6 180 aa2.22□□□□□ -2.05
LIMA1-205ENST00000550592 HIST1H2BLQ99880 126 aa2.22□□□□□ -2.05
LIMA1-205ENST00000550592 GINS3Q9BRX5 216 aa2.22□□□□□ -2.05
LIMA1-205ENST00000550592 DERL1Q9BUN8 251 aa2.22□□□□□ -2.05
LIMA1-205ENST00000550592 GTSF1LQ9H1H1 148 aa2.22□□□□□ -2.05
LIMA1-205ENST00000550592 OR51I1Q9H343 314 aa2.22□□□□□ -2.05
LIMA1-205ENST00000550592 MAP1LC3AQ9H492 121 aa2.22□□□□□ -2.05
LIMA1-205ENST00000550592 RERGLQ9H628 205 aa2.22□□□□□ -2.05
LIMA1-205ENST00000550592 ZNF286AQ9HBT8 521 aa2.22□□□□□ -2.05
LIMA1-205ENST00000550592 KCNIP2Q9NS61 270 aa2.22□□□□□ -2.05
LIMA1-205ENST00000550592 TAS2R8Q9NYW2 309 aa2.22□□□□□ -2.05
LIMA1-205ENST00000550592 UQCR10Q9UDW1 63 aa2.22□□□□□ -2.05
LIMA1-205ENST00000550592 CYSLTR1Q9Y271 337 aa2.22□□□□□ -2.05
LIMA1-205ENST00000550592 IGKV1-12A0A0C4DH73 117 aa2.21□□□□□ -2.06
LIMA1-205ENST00000550592 A0A1W2PRE2 83 aa2.21□□□□□ -2.06
LIMA1-205ENST00000550592 TCRBV3S1A0A5B6 114 aa2.21□□□□□ -2.06
LIMA1-205ENST00000550592 DHRS12A0PJE2 317 aa2.21□□□□□ -2.06
LIMA1-205ENST00000550592 C7orf77A4D0Y5 90 aa2.21□□□□□ -2.06
LIMA1-205ENST00000550592 MEIS3P1A6NDR6 274 aa2.21□□□□□ -2.06
LIMA1-205ENST00000550592 F5H5K5 113 aa2.21□□□□□ -2.06
LIMA1-205ENST00000550592 PLA2G10O15496 165 aa2.21□□□□□ -2.06
LIMA1-205ENST00000550592 IGKV1D-12P01611 117 aa2.21□□□□□ -2.06
LIMA1-205ENST00000550592 IL3P08700 152 aa2.21□□□□□ -2.06
LIMA1-205ENST00000550592 ZNF22P17026 224 aaPredicted RBP2.21□□□□□ -2.06
LIMA1-205ENST00000550592 EVI2AP22794 236 aa2.21□□□□□ -2.06
LIMA1-205ENST00000550592 GZMMP51124 257 aa2.21□□□□□ -2.06
LIMA1-205ENST00000550592 TAS2R20P59543 309 aa2.21□□□□□ -2.06
LIMA1-205ENST00000550592 RPS28P62857 69 aaKnown RBP2.21□□□□□ -2.06
LIMA1-205ENST00000550592 TMEM78Q5T7P6 136 aa2.21□□□□□ -2.06
LIMA1-205ENST00000550592 BCL2L15Q5TBC7 163 aa2.21□□□□□ -2.06
LIMA1-205ENST00000550592 HEPN1Q6WQI6 88 aa2.21□□□□□ -2.06
LIMA1-205ENST00000550592 DYNAPQ8N1N2 210 aa2.21□□□□□ -2.06
LIMA1-205ENST00000550592 C5orf17Q8NAS9 161 aa2.21□□□□□ -2.06
LIMA1-205ENST00000550592 OR51T1Q8NGJ9 327 aa2.21□□□□□ -2.06
LIMA1-205ENST00000550592 ZCCHC13Q8WW36 166 aaKnown RBP2.21□□□□□ -2.06
LIMA1-205ENST00000550592 H1FXQ92522 213 aaKnown RBP2.21□□□□□ -2.06
LIMA1-205ENST00000550592 GPR146Q96CH1 333 aa2.21□□□□□ -2.06
LIMA1-205ENST00000550592 ACY3Q96HD9 319 aa2.21□□□□□ -2.06
LIMA1-205ENST00000550592 GPR22Q99680 433 aa2.21□□□□□ -2.06
LIMA1-205ENST00000550592 MGLLQ99685 303 aa2.21□□□□□ -2.06
LIMA1-205ENST00000550592 VAMP8Q9BV40 100 aa2.21□□□□□ -2.06
LIMA1-205ENST00000550592 ZNF471Q9BX82 626 aaPredicted RBP2.21□□□□□ -2.06
LIMA1-205ENST00000550592 SPANXDQ9BXN6 97 aa2.21□□□□□ -2.06
LIMA1-205ENST00000550592 POPDC3Q9HBV1 291 aa2.21□□□□□ -2.06
LIMA1-205ENST00000550592 TXNL4BQ9NX01 149 aaKnown RBP2.21□□□□□ -2.06
LIMA1-205ENST00000550592 MRPS16Q9Y3D3 137 aaKnown RBP2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms